RNA–Protein interactions for RNA: ENST00000250448.2

FOXA1-201, Transcript of forkhead box A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXA1, Length 2,862 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-201ENST00000250448 BTBD7Q9P203 1132 aa18.39■□□□□ 0.53
FOXA1-201ENST00000250448 CCDC188H7C350 402 aa18.38■□□□□ 0.53
FOXA1-201ENST00000250448 ZBTB39O15060 712 aa18.38■□□□□ 0.53
FOXA1-201ENST00000250448 GAS7O60861 476 aa18.38■□□□□ 0.53
FOXA1-201ENST00000250448 UCHL3P15374 230 aa18.38■□□□□ 0.53
FOXA1-201ENST00000250448 MTMR3Q13615 1198 aa18.38■□□□□ 0.53
FOXA1-201ENST00000250448 HOXC10Q9NYD6 342 aa18.38■□□□□ 0.53
FOXA1-201ENST00000250448 FBXL5Q9UKA1 691 aa18.38■□□□□ 0.53
FOXA1-201ENST00000250448 RPTORQ8N122 1335 aa18.38■□□□□ 0.53
FOXA1-201ENST00000250448 PSMD10O75832 226 aa18.38■□□□□ 0.53
FOXA1-201ENST00000250448 KRT18P05783 430 aaKnown RBP18.38■□□□□ 0.53
FOXA1-201ENST00000250448 GJA5P36382 358 aa18.38■□□□□ 0.53
FOXA1-201ENST00000250448 PABPC4Q13310 644 aaKnown RBP eCLIP18.38■□□□□ 0.53
FOXA1-201ENST00000250448 AGBL2Q5U5Z8 902 aa18.38■□□□□ 0.53
FOXA1-201ENST00000250448 ALKBH5Q6P6C2 394 aaKnown RBP18.38■□□□□ 0.53
FOXA1-201ENST00000250448 OTOP1Q7RTM1 612 aa18.38■□□□□ 0.53
FOXA1-201ENST00000250448 DNAAF5Q86Y56 855 aa18.38■□□□□ 0.53
FOXA1-201ENST00000250448 C3orf20Q8ND61 904 aa18.38■□□□□ 0.53
FOXA1-201ENST00000250448 BANK1Q8NDB2 785 aa18.38■□□□□ 0.53
FOXA1-201ENST00000250448 UBLCP1Q8WVY7 318 aaPredicted RBP18.38■□□□□ 0.53
FOXA1-201ENST00000250448 TEX13BQ9BXU2 312 aa18.38■□□□□ 0.53
FOXA1-201ENST00000250448 ZHX3Q9H4I2 956 aa18.38■□□□□ 0.53
FOXA1-201ENST00000250448 KCNH7Q9NS40 1196 aa18.38■□□□□ 0.53
FOXA1-201ENST00000250448 ATP8B3O60423 1300 aa18.38■□□□□ 0.53
FOXA1-201ENST00000250448 FRMD3A2A2Y4 597 aa18.37■□□□□ 0.53
FOXA1-201ENST00000250448 SPDYE5A6NIY4 337 aa18.37■□□□□ 0.53
FOXA1-201ENST00000250448 TMCO5BA8MYB1 307 aa18.37■□□□□ 0.53
FOXA1-201ENST00000250448 IPO5O00410 1097 aaKnown RBP18.37■□□□□ 0.53
FOXA1-201ENST00000250448 KRIT1O00522 736 aa18.37■□□□□ 0.53
FOXA1-201ENST00000250448 AFPP02771 609 aaKnown RBP18.37■□□□□ 0.53
FOXA1-201ENST00000250448 PPATQ06203 517 aa18.37■□□□□ 0.53
FOXA1-201ENST00000250448 DRP2Q13474 957 aa18.37■□□□□ 0.53
FOXA1-201ENST00000250448 PGM5Q15124 567 aa18.37■□□□□ 0.53
FOXA1-201ENST00000250448 ARHGEF16Q5VV41 709 aa18.37■□□□□ 0.53
FOXA1-201ENST00000250448 PROCA1Q8NCQ7 364 aaPredicted RBP18.37■□□□□ 0.53
FOXA1-201ENST00000250448 EIF2AK1Q9BQI3 630 aaKnown RBP18.37■□□□□ 0.53
FOXA1-201ENST00000250448 GMNCA6NCL1 334 aa18.37■□□□□ 0.53
FOXA1-201ENST00000250448 PRKCIP41743 596 aa18.37■□□□□ 0.53
FOXA1-201ENST00000250448 TRMT1LQ7Z2T5 733 aaKnown RBP18.37■□□□□ 0.53
FOXA1-201ENST00000250448 PEX26Q7Z412 305 aa18.37■□□□□ 0.53
FOXA1-201ENST00000250448 FRMD5Q7Z6J6 570 aa18.37■□□□□ 0.53
FOXA1-201ENST00000250448 PNMA8AQ86V59 439 aaPredicted RBP18.37■□□□□ 0.53
FOXA1-201ENST00000250448 CCDC13Q8IYE1 715 aa18.37■□□□□ 0.53
FOXA1-201ENST00000250448 PIGOQ8TEQ8 1089 aa18.37■□□□□ 0.53
FOXA1-201ENST00000250448 SLC5A5Q92911 643 aa18.37■□□□□ 0.53
FOXA1-201ENST00000250448 UNC45AQ9H3U1 944 aa18.37■□□□□ 0.53
FOXA1-201ENST00000250448 A1CFQ9NQ94 594 aaKnown RBP18.37■□□□□ 0.53
FOXA1-201ENST00000250448 PXMP2Q9NR77 195 aa18.37■□□□□ 0.53
FOXA1-201ENST00000250448 ARMCX3Q9UH62 379 aaPredicted RBP18.37■□□□□ 0.53
FOXA1-201ENST00000250448 NENFQ9UMX5 172 aa18.37■□□□□ 0.53
FOXA1-201ENST00000250448 A0A0G2JLL6 359 aaPredicted RBP18.36■□□□□ 0.53
FOXA1-201ENST00000250448 TESPA1A2RU30 521 aaPredicted RBP18.36■□□□□ 0.53
FOXA1-201ENST00000250448 ANXA13P27216 316 aa18.36■□□□□ 0.53
FOXA1-201ENST00000250448 PRRT2Q7Z6L0 340 aaPredicted RBP18.36■□□□□ 0.53
FOXA1-201ENST00000250448 TPH2Q8IWU9 490 aa18.36■□□□□ 0.53
FOXA1-201ENST00000250448 SLITRK6Q9H5Y7 841 aa18.36■□□□□ 0.53
FOXA1-201ENST00000250448 SCN4AP35499 1836 aa18.36■□□□□ 0.53
FOXA1-201ENST00000250448 PCNTO95613 3336 aa18.36■□□□□ 0.53
FOXA1-201ENST00000250448 SLC26A4O43511 780 aa18.36■□□□□ 0.53
FOXA1-201ENST00000250448 TRAPPC3O43617 180 aa18.36■□□□□ 0.53
FOXA1-201ENST00000250448 SORBS3O60504 671 aa18.36■□□□□ 0.53
FOXA1-201ENST00000250448 PON1P27169 355 aa18.36■□□□□ 0.53
FOXA1-201ENST00000250448 PPP2R2AP63151 447 aa18.36■□□□□ 0.53
FOXA1-201ENST00000250448 EXOC3L4Q17RC7 722 aa18.36■□□□□ 0.53
FOXA1-201ENST00000250448 TKFCQ3LXA3 575 aa18.36■□□□□ 0.53
FOXA1-201ENST00000250448 CCDC121Q6ZUS5 278 aa18.36■□□□□ 0.53
FOXA1-201ENST00000250448 ARMC9Q7Z3E5 817 aa18.36■□□□□ 0.53
FOXA1-201ENST00000250448 RASGEF1CQ8N431 466 aa18.36■□□□□ 0.53
FOXA1-201ENST00000250448 DYDC2Q96IM9 177 aa18.36■□□□□ 0.53
FOXA1-201ENST00000250448 PDCD2LQ9BRP1 358 aa18.36■□□□□ 0.53
FOXA1-201ENST00000250448 STXBP5LQ9Y2K9 1186 aa18.36■□□□□ 0.53
FOXA1-201ENST00000250448 DAPK3O43293 454 aa18.36■□□□□ 0.53
FOXA1-201ENST00000250448 FDX1P10109 184 aa18.36■□□□□ 0.53
FOXA1-201ENST00000250448 ITGA4P13612 1032 aa18.36■□□□□ 0.53
FOXA1-201ENST00000250448 FLT3P36888 993 aa18.36■□□□□ 0.53
FOXA1-201ENST00000250448 CASP5P51878 434 aa18.36■□□□□ 0.53
FOXA1-201ENST00000250448 SMTNP53814 917 aa18.36■□□□□ 0.53
FOXA1-201ENST00000250448 ARSHQ5FYA8 562 aa18.36■□□□□ 0.53
FOXA1-201ENST00000250448 SLFN11Q7Z7L1 901 aa18.36■□□□□ 0.53
FOXA1-201ENST00000250448 ASCC2Q9H1I8 757 aaPredicted RBP18.36■□□□□ 0.53
FOXA1-201ENST00000250448 BCAS3Q9H6U6 928 aa18.36■□□□□ 0.53
FOXA1-201ENST00000250448 SLC12A3P55017 1021 aa18.35■□□□□ 0.53
FOXA1-201ENST00000250448 PPARDQ03181 441 aa18.35■□□□□ 0.53
FOXA1-201ENST00000250448 TMC3Q7Z5M5 1100 aa18.35■□□□□ 0.53
FOXA1-201ENST00000250448 ERMNQ8TAM6 284 aa18.35■□□□□ 0.53
FOXA1-201ENST00000250448 LMBR1Q8WVP7 490 aa18.35■□□□□ 0.53
FOXA1-201ENST00000250448 SUCLA2Q9P2R7 463 aaPredicted RBP18.35■□□□□ 0.53
FOXA1-201ENST00000250448 DDX20Q9UHI6 824 aaKnown RBP18.35■□□□□ 0.53
FOXA1-201ENST00000250448 AMACRQ9UHK6 382 aa18.35■□□□□ 0.53
FOXA1-201ENST00000250448 TRAF3IP3Q9Y228 551 aa18.35■□□□□ 0.53
FOXA1-201ENST00000250448 ATP9AO75110 1047 aa18.35■□□□□ 0.53
FOXA1-201ENST00000250448 H2AFZP0C0S5 128 aa18.35■□□□□ 0.53
FOXA1-201ENST00000250448 RPA1P27694 616 aa18.35■□□□□ 0.53
FOXA1-201ENST00000250448 TMOD1P28289 359 aa18.35■□□□□ 0.53
FOXA1-201ENST00000250448 GSCP56915 257 aaPredicted RBP18.35■□□□□ 0.53
FOXA1-201ENST00000250448 PCNX4Q63HM2 1172 aa18.35■□□□□ 0.53
FOXA1-201ENST00000250448 H2AFVQ71UI9 128 aa18.35■□□□□ 0.53
FOXA1-201ENST00000250448 ACAD9Q9H845 621 aa18.35■□□□□ 0.53
FOXA1-201ENST00000250448 ACTR5Q9H9F9 607 aaPredicted RBP18.35■□□□□ 0.53
FOXA1-201ENST00000250448 CYP39A1Q9NYL5 469 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms