RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 RTN4Q9NQC3 1192 aaKnown RBP13.55□□□□□ -0.24
RFPL3-201ENST00000249007 CEP131Q9UPN4 1083 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 DOCK6Q96HP0 2047 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 DMXL2Q8TDJ6 3036 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 MAST4O15021 2626 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 NCAM2O15394 837 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 SOD2P04179 222 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 SPATA31D3P0C874 917 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 RPS9P46781 194 aaKnown RBP13.55□□□□□ -0.24
RFPL3-201ENST00000249007 GPC3P51654 580 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 PFKPQ01813 784 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 CSRP2Q16527 193 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 TWF2Q6IBS0 349 aaKnown RBP13.55□□□□□ -0.24
RFPL3-201ENST00000249007 PRR23BQ6ZRT6 265 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 SPATA31D4Q6ZUB0 917 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 ZNF280BQ86YH2 543 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 CELF5Q8N6W0 485 aaKnown RBP13.55□□□□□ -0.24
RFPL3-201ENST00000249007 NELL2Q99435 816 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 TRAIPQ9BWF2 469 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 NT5C3AQ9H0P0 336 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 PLEKHA4Q9H4M7 779 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 CHST12Q9NRB3 414 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 SSX2IPQ9Y2D8 614 aa13.55□□□□□ -0.24
RFPL3-201ENST00000249007 LAMA1P25391 3075 aa13.54□□□□□ -0.24
RFPL3-201ENST00000249007 MEIS3P2A8K0S8 358 aa13.54□□□□□ -0.24
RFPL3-201ENST00000249007 CSDE1O75534 798 aaKnown RBP13.54□□□□□ -0.24
RFPL3-201ENST00000249007 OFD1O75665 1012 aa13.54□□□□□ -0.24
RFPL3-201ENST00000249007 PAPLNO95428 1278 aa13.54□□□□□ -0.24
RFPL3-201ENST00000249007 SKIP12755 728 aa13.54□□□□□ -0.24
RFPL3-201ENST00000249007 FSHRP23945 695 aa13.54□□□□□ -0.24
RFPL3-201ENST00000249007 TARSP26639 723 aaKnown RBP13.54□□□□□ -0.24
RFPL3-201ENST00000249007 NRLP54845 237 aa13.54□□□□□ -0.24
RFPL3-201ENST00000249007 MTAPQ13126 283 aa13.54□□□□□ -0.24
RFPL3-201ENST00000249007 SART3Q15020 963 aaKnown RBP13.54□□□□□ -0.24
RFPL3-201ENST00000249007 LINC01465Q8N7H1 131 aa13.54□□□□□ -0.24
RFPL3-201ENST00000249007 CTCFLQ8NI51 663 aaPredicted RBP13.54□□□□□ -0.24
RFPL3-201ENST00000249007 HDAC7Q8WUI4 952 aa13.54□□□□□ -0.24
RFPL3-201ENST00000249007 NLRP7Q8WX94 980 aa13.54□□□□□ -0.24
RFPL3-201ENST00000249007 DIAPH3Q9NSV4 1193 aa13.54□□□□□ -0.24
RFPL3-201ENST00000249007 FAM217BQ9NTX9 383 aaPredicted RBP13.54□□□□□ -0.24
RFPL3-201ENST00000249007 ZDHHC7Q9NXF8 308 aa13.54□□□□□ -0.24
RFPL3-201ENST00000249007 RCAN3Q9UKA8 241 aa13.54□□□□□ -0.24
RFPL3-201ENST00000249007 ZMIZ1Q9ULJ6 1067 aa13.54□□□□□ -0.24
RFPL3-201ENST00000249007 PCDHB15Q9Y5E8 787 aa13.54□□□□□ -0.24
RFPL3-201ENST00000249007 ASH1LQ9NR48 2969 aaKnown RBP13.53□□□□□ -0.24
RFPL3-201ENST00000249007 HELZ2Q9BYK8 2649 aaKnown RBP13.53□□□□□ -0.24
RFPL3-201ENST00000249007 SMG1Q96Q15 3661 aaKnown RBP13.53□□□□□ -0.24
RFPL3-201ENST00000249007 FOXD2O60548 495 aaPredicted RBP13.53□□□□□ -0.24
RFPL3-201ENST00000249007 ALDH2P05091 517 aa13.53□□□□□ -0.24
RFPL3-201ENST00000249007 SMARCA1P28370 1054 aa13.53□□□□□ -0.24
RFPL3-201ENST00000249007 TPRG1Q6ZUI0 275 aa13.53□□□□□ -0.24
RFPL3-201ENST00000249007 MTSS1LQ765P7 747 aa13.53□□□□□ -0.24
RFPL3-201ENST00000249007 URGCPQ8TCY9 931 aa13.53□□□□□ -0.24
RFPL3-201ENST00000249007 PRKD2Q9BZL6 878 aa13.53□□□□□ -0.24
RFPL3-201ENST00000249007 LY9Q9HBG7 655 aa13.53□□□□□ -0.24
RFPL3-201ENST00000249007 CDH7Q9ULB5 785 aa13.53□□□□□ -0.24
RFPL3-201ENST00000249007 FAN1Q9Y2M0 1017 aa13.53□□□□□ -0.24
RFPL3-201ENST00000249007 MAFBQ9Y5Q3 323 aaPredicted RBP13.53□□□□□ -0.24
RFPL3-201ENST00000249007 ITPR1Q14643 2758 aa13.52□□□□□ -0.24
RFPL3-201ENST00000249007 SOBPA7XYQ1 873 aa13.52□□□□□ -0.25
RFPL3-201ENST00000249007 MEIS1O00470 390 aa13.52□□□□□ -0.25
RFPL3-201ENST00000249007 GAS2O43903 313 aaKnown RBP13.52□□□□□ -0.25
RFPL3-201ENST00000249007 DDHD2O94830 711 aa13.52□□□□□ -0.25
RFPL3-201ENST00000249007 GLUD2P49448 558 aa13.52□□□□□ -0.25
RFPL3-201ENST00000249007 PPP2R5DQ14738 602 aa13.52□□□□□ -0.25
RFPL3-201ENST00000249007 PALB2Q86YC2 1186 aa13.52□□□□□ -0.25
RFPL3-201ENST00000249007 FAM193BQ96PV7 902 aaPredicted RBP13.52□□□□□ -0.25
RFPL3-201ENST00000249007 LZTS2Q9BRK4 669 aa13.52□□□□□ -0.25
RFPL3-201ENST00000249007 TMEM175Q9BSA9 504 aa13.52□□□□□ -0.25
RFPL3-201ENST00000249007 HERC2P3Q9BVR0 1158 aa13.52□□□□□ -0.25
RFPL3-201ENST00000249007 FAM105AQ9NUU6 356 aa13.52□□□□□ -0.25
RFPL3-201ENST00000249007 PIN4Q9Y237 131 aaKnown RBP13.52□□□□□ -0.25
RFPL3-201ENST00000249007 MRPS17Q9Y2R5 130 aaKnown RBP13.52□□□□□ -0.25
RFPL3-201ENST00000249007 MTCL1Q9Y4B5 1905 aaKnown RBP13.52□□□□□ -0.25
RFPL3-201ENST00000249007 LOC400499M0QZD8 3231 aa13.52□□□□□ -0.25
RFPL3-201ENST00000249007 AKAP13Q12802 2813 aa13.51□□□□□ -0.25
RFPL3-201ENST00000249007 C1QTNF9BB2RNN3 333 aa13.51□□□□□ -0.25
RFPL3-201ENST00000249007 NRP1O14786 923 aa13.51□□□□□ -0.25
RFPL3-201ENST00000249007 TGM5O43548 720 aa13.51□□□□□ -0.25
RFPL3-201ENST00000249007 C1QTNF9P0C862 333 aa13.51□□□□□ -0.25
RFPL3-201ENST00000249007 TDGF1P13385 188 aa13.51□□□□□ -0.25
RFPL3-201ENST00000249007 RAB27AP51159 221 aa13.51□□□□□ -0.25
RFPL3-201ENST00000249007 FGD1P98174 961 aa13.51□□□□□ -0.25
RFPL3-201ENST00000249007 ADCY1Q08828 1119 aa13.51□□□□□ -0.25
RFPL3-201ENST00000249007 UNQ6494/PRO21346Q6UXR6 183 aa13.51□□□□□ -0.25
RFPL3-201ENST00000249007 ZNF852Q6ZMS4 543 aa13.51□□□□□ -0.25
RFPL3-201ENST00000249007 TAS1R1Q7RTX1 841 aa13.51□□□□□ -0.25
RFPL3-201ENST00000249007 MAP3K14Q99558 947 aa13.51□□□□□ -0.25
RFPL3-201ENST00000249007 RXFP1Q9HBX9 757 aa13.51□□□□□ -0.25
RFPL3-201ENST00000249007 ZNF623O75123 536 aa13.5□□□□□ -0.25
RFPL3-201ENST00000249007 PLEKHA8P1O95397 391 aa13.5□□□□□ -0.25
RFPL3-201ENST00000249007 SFPQP23246 707 aaKnown RBP eCLIP13.5□□□□□ -0.25
RFPL3-201ENST00000249007 SIM2Q14190 667 aaPredicted RBP13.5□□□□□ -0.25
RFPL3-201ENST00000249007 HSP90AA2PQ14568 343 aaPredicted RBP13.5□□□□□ -0.25
RFPL3-201ENST00000249007 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.5□□□□□ -0.25
RFPL3-201ENST00000249007 RALYLQ86SE5 291 aaKnown RBP13.5□□□□□ -0.25
RFPL3-201ENST00000249007 FGF13Q92913 245 aa13.5□□□□□ -0.25
RFPL3-201ENST00000249007 PGBD4Q96DM1 585 aa13.5□□□□□ -0.25
RFPL3-201ENST00000249007 PGBD1Q96JS3 809 aa13.5□□□□□ -0.25
RFPL3-201ENST00000249007 FAM167AQ96KS9 214 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms