RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 FAM237AA0A1B0GTK4 181 aa16.9■□□□□ 0.3
SIN3B-201ENST00000248054 MSH4O15457 936 aa16.9■□□□□ 0.3
SIN3B-201ENST00000248054 IFNB1P01574 187 aa16.9■□□□□ 0.3
SIN3B-201ENST00000248054 PPP1R21Q6ZMI0 780 aa16.9■□□□□ 0.3
SIN3B-201ENST00000248054 SEPT1Q8WYJ6 367 aa16.9■□□□□ 0.3
SIN3B-201ENST00000248054 UBE2Q2LH0YL09 131 aa16.9■□□□□ 0.3
SIN3B-201ENST00000248054 ZRANB2O95218 330 aaKnown RBP eCLIP16.9■□□□□ 0.31e-6■■■■■ 55
SIN3B-201ENST00000248054 CALB1P05937 261 aa16.9■□□□□ 0.3
SIN3B-201ENST00000248054 NMT1P30419 496 aaKnown RBP16.9■□□□□ 0.3
SIN3B-201ENST00000248054 CXCL9Q07325 125 aa16.9■□□□□ 0.3
SIN3B-201ENST00000248054 MXD4Q14582 209 aaPredicted RBP16.9■□□□□ 0.3
SIN3B-201ENST00000248054 CATSPER4Q7RTX7 472 aa16.9■□□□□ 0.3
SIN3B-201ENST00000248054 CATSPER3Q86XQ3 398 aa16.9■□□□□ 0.3
SIN3B-201ENST00000248054 RUBCNQ92622 972 aa16.9■□□□□ 0.3
SIN3B-201ENST00000248054 ELP3Q9H9T3 547 aa16.9■□□□□ 0.3
SIN3B-201ENST00000248054 STRIP2Q9ULQ0 834 aa16.9■□□□□ 0.3
SIN3B-201ENST00000248054 GPC3P51654 580 aa16.89■□□□□ 0.29
SIN3B-201ENST00000248054 RHBDL3P58872 404 aa16.89■□□□□ 0.29
SIN3B-201ENST00000248054 ZNF568Q3ZCX4 644 aa16.89■□□□□ 0.29
SIN3B-201ENST00000248054 NT5DC1Q5TFE4 455 aa16.89■□□□□ 0.29
SIN3B-201ENST00000248054 ATP8B3O60423 1300 aa16.89■□□□□ 0.29
SIN3B-201ENST00000248054 TPD52P55327 224 aaPredicted RBP16.89■□□□□ 0.29
SIN3B-201ENST00000248054 TC2NQ8N9U0 490 aa16.89■□□□□ 0.29
SIN3B-201ENST00000248054 MKL1Q969V6 931 aa16.89■□□□□ 0.29
SIN3B-201ENST00000248054 EPB41L5Q9HCM4 733 aa16.89■□□□□ 0.29
SIN3B-201ENST00000248054 KCNH7Q9NS40 1196 aa16.89■□□□□ 0.29
SIN3B-201ENST00000248054 KCPQ6ZWJ8 1503 aa16.89■□□□□ 0.29
SIN3B-201ENST00000248054 KIF3CO14782 793 aa16.89■□□□□ 0.29
SIN3B-201ENST00000248054 PALMO75781 387 aa16.89■□□□□ 0.29
SIN3B-201ENST00000248054 SUN1O94901 812 aa16.89■□□□□ 0.29
SIN3B-201ENST00000248054 AGO2Q9UKV8 859 aaKnown RBP16.89■□□□□ 0.29
SIN3B-201ENST00000248054 EIF3BP55884 814 aaKnown RBP16.89■□□□□ 0.29
SIN3B-201ENST00000248054 ARMCX2Q7L311 632 aa16.89■□□□□ 0.29
SIN3B-201ENST00000248054 EMSYQ7Z589 1322 aa16.88■□□□□ 0.29
SIN3B-201ENST00000248054 GFPT1Q06210 699 aaPredicted RBP16.88■□□□□ 0.29
SIN3B-201ENST00000248054 SEPT6Q14141 434 aa16.88■□□□□ 0.29
SIN3B-201ENST00000248054 PALM2Q8IXS6 379 aa16.88■□□□□ 0.29
SIN3B-201ENST00000248054 CCDC13Q8IYE1 715 aa16.88■□□□□ 0.29
SIN3B-201ENST00000248054 CCT6BQ92526 530 aa16.88■□□□□ 0.29
SIN3B-201ENST00000248054 STK33Q9BYT3 514 aa16.88■□□□□ 0.29
SIN3B-201ENST00000248054 LRRC4BQ9NT99 713 aa16.88■□□□□ 0.29
SIN3B-201ENST00000248054 C2orf54Q08AI8 447 aa16.88■□□□□ 0.29
SIN3B-201ENST00000248054 PDCLQ13371 301 aa16.88■□□□□ 0.29
SIN3B-201ENST00000248054 SLMAPQ14BN4 828 aa16.88■□□□□ 0.29
SIN3B-201ENST00000248054 ILDR1Q86SU0 546 aaPredicted RBP16.88■□□□□ 0.29
SIN3B-201ENST00000248054 SESTD1Q86VW0 696 aa16.88■□□□□ 0.29
SIN3B-201ENST00000248054 ERICH1Q86X53 443 aa16.88■□□□□ 0.29
SIN3B-201ENST00000248054 RNF169Q8NCN4 708 aa16.88■□□□□ 0.29
SIN3B-201ENST00000248054 CCDC197Q8NCU1 140 aa16.88■□□□□ 0.29
SIN3B-201ENST00000248054 ACER1Q8TDN7 264 aa16.88■□□□□ 0.29
SIN3B-201ENST00000248054 AGBL1Q96MI9 1066 aa16.88■□□□□ 0.29
SIN3B-201ENST00000248054 NPHP3-ACAD11A0A0J9YXS1 232 aa16.88■□□□□ 0.29
SIN3B-201ENST00000248054 BACE1P56817 501 aa16.88■□□□□ 0.29
SIN3B-201ENST00000248054 SAMD7Q7Z3H4 446 aa16.88■□□□□ 0.29
SIN3B-201ENST00000248054 DDX23Q9BUQ8 820 aaKnown RBP16.88■□□□□ 0.29
SIN3B-201ENST00000248054 SMARCAD1Q9H4L7 1026 aa16.88■□□□□ 0.29
SIN3B-201ENST00000248054 ACTR5Q9H9F9 607 aaPredicted RBP16.88■□□□□ 0.29
SIN3B-201ENST00000248054 PODXLO00592 558 aa16.88■□□□□ 0.29
SIN3B-201ENST00000248054 THNSL1Q8IYQ7 743 aa16.88■□□□□ 0.29
SIN3B-201ENST00000248054 APOL6Q9BWW8 343 aa16.88■□□□□ 0.29
SIN3B-201ENST00000248054 KIAA1683Q9H0B3 1180 aa16.88■□□□□ 0.29
SIN3B-201ENST00000248054 HSPBP1Q9NZL4 362 aa16.88■□□□□ 0.29
SIN3B-201ENST00000248054 PPP1R9AQ9ULJ8 1098 aa16.88■□□□□ 0.29
SIN3B-201ENST00000248054 SPEF2Q9C093 1822 aa16.87■□□□□ 0.29
SIN3B-201ENST00000248054 ASAP2O43150 1006 aa16.87■□□□□ 0.29
SIN3B-201ENST00000248054 PTPROQ16827 1216 aa16.87■□□□□ 0.29
SIN3B-201ENST00000248054 RPUSD2Q8IZ73 545 aaKnown RBP16.87■□□□□ 0.29
SIN3B-201ENST00000248054 ATG4CQ96DT6 458 aa16.87■□□□□ 0.29
SIN3B-201ENST00000248054 KRT1P04264 644 aa16.87■□□□□ 0.29
SIN3B-201ENST00000248054 CLTAP09496 248 aa16.87■□□□□ 0.29
SIN3B-201ENST00000248054 ZNF699Q32M78 642 aa16.87■□□□□ 0.29
SIN3B-201ENST00000248054 SUGP1Q8IWZ8 645 aaKnown RBP16.87■□□□□ 0.29
SIN3B-201ENST00000248054 GAS2O43903 313 aaKnown RBP16.87■□□□□ 0.29
SIN3B-201ENST00000248054 CYP11B2P19099 503 aa16.87■□□□□ 0.29
SIN3B-201ENST00000248054 RPS6P62753 249 aaKnown RBP16.87■□□□□ 0.29
SIN3B-201ENST00000248054 SH2D4BQ5SQS7 431 aa16.87■□□□□ 0.29
SIN3B-201ENST00000248054 RFFLQ8WZ73 363 aa16.87■□□□□ 0.29
SIN3B-201ENST00000248054 IRX2Q9BZI1 471 aaPredicted RBP16.87■□□□□ 0.29
SIN3B-201ENST00000248054 RBAKQ9NYW8 714 aaPredicted RBP16.87■□□□□ 0.29
SIN3B-201ENST00000248054 ADAM22Q9P0K1 906 aa16.87■□□□□ 0.29
SIN3B-201ENST00000248054 CNOT8Q9UFF9 292 aaKnown RBP16.87■□□□□ 0.29
SIN3B-201ENST00000248054 CASQ2O14958 399 aaPredicted RBP16.87■□□□□ 0.29
SIN3B-201ENST00000248054 FMO5P49326 533 aa16.87■□□□□ 0.29
SIN3B-201ENST00000248054 MRPS9P82933 396 aaKnown RBP16.87■□□□□ 0.29
SIN3B-201ENST00000248054 SLC18A3Q16572 532 aa16.87■□□□□ 0.29
SIN3B-201ENST00000248054 NACA2Q9H009 215 aa16.87■□□□□ 0.29
SIN3B-201ENST00000248054 APEX2Q9UBZ4 518 aa16.87■□□□□ 0.29
SIN3B-201ENST00000248054 FIGNQ5HY92 759 aa16.86■□□□□ 0.29
SIN3B-201ENST00000248054 NAA35Q5VZE5 725 aa16.86■□□□□ 0.29
SIN3B-201ENST00000248054 DEFB132Q7Z7B7 95 aa16.86■□□□□ 0.29
SIN3B-201ENST00000248054 RBM41Q96IZ5 413 aaKnown RBP16.86■□□□□ 0.29
SIN3B-201ENST00000248054 DDX4Q9NQI0 724 aaKnown RBP16.86■□□□□ 0.29
SIN3B-201ENST00000248054 ADARB2Q9NS39 739 aaKnown RBP16.86■□□□□ 0.29
SIN3B-201ENST00000248054 KDM3BQ7LBC6 1761 aa16.86■□□□□ 0.29
SIN3B-201ENST00000248054 MAGEB2O15479 319 aa16.86■□□□□ 0.29
SIN3B-201ENST00000248054 ANKRD42Q8N9B4 389 aa16.86■□□□□ 0.29
SIN3B-201ENST00000248054 HPS3Q969F9 1004 aa16.86■□□□□ 0.29
SIN3B-201ENST00000248054 PARK7Q99497 189 aaKnown RBP16.86■□□□□ 0.29
SIN3B-201ENST00000248054 TXNP10599 105 aaKnown RBP16.86■□□□□ 0.29
SIN3B-201ENST00000248054 CD58P19256 250 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms