RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.76□□□□□ -0.533e-9■■■□□ 16.8
COPA-201ENST00000241704 B4GALNT2Q8NHY0 566 aa11.76□□□□□ -0.53
COPA-201ENST00000241704 TMEM39BQ9GZU3 492 aa11.76□□□□□ -0.53
COPA-201ENST00000241704 SEL1LQ9UBV2 794 aa11.76□□□□□ -0.53
COPA-201ENST00000241704 PHF20L1A8MW92 1017 aa11.76□□□□□ -0.53
COPA-201ENST00000241704 EIF4A3P38919 411 aaKnown RBP11.76□□□□□ -0.53
COPA-201ENST00000241704 USP49Q70CQ1 688 aa11.76□□□□□ -0.53
COPA-201ENST00000241704 ARHGEF2Q92974 986 aaKnown RBP11.76□□□□□ -0.53
COPA-201ENST00000241704 ECT2Q9H8V3 914 aa11.76□□□□□ -0.53
COPA-201ENST00000241704 INTS13Q9NVM9 706 aa11.76□□□□□ -0.53
COPA-201ENST00000241704 LIMA1Q9UHB6 759 aaKnown RBP11.76□□□□□ -0.53
COPA-201ENST00000241704 HPSEQ9Y251 543 aa11.76□□□□□ -0.53
COPA-201ENST00000241704 AKAP12Q02952 1782 aa11.76□□□□□ -0.53
COPA-201ENST00000241704 FAM205AQ6ZU69 1335 aa11.76□□□□□ -0.53
COPA-201ENST00000241704 SRRM3A6NNA2 597 aaPredicted RBP11.76□□□□□ -0.53
COPA-201ENST00000241704 TBX3O15119 743 aa11.76□□□□□ -0.53
COPA-201ENST00000241704 SERPING1P05155 500 aa11.76□□□□□ -0.53
COPA-201ENST00000241704 ZBTB33Q86T24 672 aa11.76□□□□□ -0.53
COPA-201ENST00000241704 FAM133AQ8N9E0 248 aa11.76□□□□□ -0.53
COPA-201ENST00000241704 MGARPQ8TDB4 240 aa11.76□□□□□ -0.53
COPA-201ENST00000241704 SNX25Q9H3E2 840 aa11.76□□□□□ -0.53
COPA-201ENST00000241704 ASIC3Q9UHC3 531 aa11.76□□□□□ -0.53
COPA-201ENST00000241704 PLSCR1O15162 318 aa11.76□□□□□ -0.53
COPA-201ENST00000241704 NTRK3Q16288 839 aa11.76□□□□□ -0.53
COPA-201ENST00000241704 NAALADL2Q58DX5 795 aa11.76□□□□□ -0.53
COPA-201ENST00000241704 TTMPQ5BVD1 217 aa11.76□□□□□ -0.53
COPA-201ENST00000241704 PPP1R21Q6ZMI0 780 aa11.76□□□□□ -0.53
COPA-201ENST00000241704 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.76□□□□□ -0.535e-6■■■■■ 37.4
COPA-201ENST00000241704 FAM149B1Q96BN6 582 aa11.76□□□□□ -0.53
COPA-201ENST00000241704 EIF2AK1Q9BQI3 630 aaKnown RBP11.76□□□□□ -0.53
COPA-201ENST00000241704 RGL1Q9NZL6 768 aa11.76□□□□□ -0.53
COPA-201ENST00000241704 G3BP2Q9UN86 482 aaKnown RBP11.76□□□□□ -0.53
COPA-201ENST00000241704 DNAJC8O75937 253 aaPredicted RBP11.75□□□□□ -0.53
COPA-201ENST00000241704 GSTA1P08263 222 aa11.75□□□□□ -0.53
COPA-201ENST00000241704 CETPP11597 493 aa11.75□□□□□ -0.53
COPA-201ENST00000241704 CYP2B6P20813 491 aa11.75□□□□□ -0.53
COPA-201ENST00000241704 NSFP46459 744 aaKnown RBP11.75□□□□□ -0.53
COPA-201ENST00000241704 DHX9Q08211 1270 aaKnown RBP11.75□□□□□ -0.53
COPA-201ENST00000241704 EHHADHQ08426 723 aa11.75□□□□□ -0.53
COPA-201ENST00000241704 NFIAQ12857 509 aa11.75□□□□□ -0.53
COPA-201ENST00000241704 EPHA7Q15375 998 aa11.75□□□□□ -0.53
COPA-201ENST00000241704 TWF2Q6IBS0 349 aaKnown RBP11.75□□□□□ -0.53
COPA-201ENST00000241704 DAGLBQ8NCG7 672 aa11.75□□□□□ -0.53
COPA-201ENST00000241704 GABPB2Q8TAK5 448 aaPredicted RBP11.75□□□□□ -0.53
COPA-201ENST00000241704 TXLNGQ9NUQ3 528 aa11.75□□□□□ -0.53
COPA-201ENST00000241704 DMGDHQ9UI17 866 aaKnown RBP11.75□□□□□ -0.53
COPA-201ENST00000241704 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.75□□□□□ -0.53
COPA-201ENST00000241704 KRIT1O00522 736 aa11.75□□□□□ -0.53
COPA-201ENST00000241704 SESN3P58005 492 aa11.75□□□□□ -0.53
COPA-201ENST00000241704 PPP2R5DQ14738 602 aa11.75□□□□□ -0.53
COPA-201ENST00000241704 KNOP1Q1ED39 458 aaKnown RBP11.75□□□□□ -0.53
COPA-201ENST00000241704 CRELD2Q6UXH1 353 aaPredicted RBP11.75□□□□□ -0.53
COPA-201ENST00000241704 FAM114A2Q9NRY5 505 aa11.75□□□□□ -0.53
COPA-201ENST00000241704 MED1Q15648 1581 aaPredicted RBP11.75□□□□□ -0.53
COPA-201ENST00000241704 RASSF9O75901 435 aa11.75□□□□□ -0.53
COPA-201ENST00000241704 NR3C1P04150 777 aa11.75□□□□□ -0.53
COPA-201ENST00000241704 EPHX2P34913 555 aa11.75□□□□□ -0.53
COPA-201ENST00000241704 ITIH3Q06033 890 aa11.75□□□□□ -0.53
COPA-201ENST00000241704 SREBF2Q12772 1141 aa11.75□□□□□ -0.53
COPA-201ENST00000241704 DPYDQ12882 1025 aa11.75□□□□□ -0.53
COPA-201ENST00000241704 C10orf76Q5T2E6 689 aa11.75□□□□□ -0.53
COPA-201ENST00000241704 ZNF483Q8TF39 744 aaPredicted RBP11.75□□□□□ -0.53
COPA-201ENST00000241704 PRDM5Q9NQX1 630 aaPredicted RBP11.75□□□□□ -0.53
COPA-201ENST00000241704 NXF1Q9UBU9 619 aaKnown RBP11.75□□□□□ -0.53
COPA-201ENST00000241704 ELF3P78545 371 aaPredicted RBP11.75□□□□□ -0.53
COPA-201ENST00000241704 KLC1Q07866 573 aa11.75□□□□□ -0.53
COPA-201ENST00000241704 BZW1Q7L1Q6 419 aaKnown RBP11.75□□□□□ -0.53
COPA-201ENST00000241704 ARHGAP22Q7Z5H3 698 aa11.75□□□□□ -0.53
COPA-201ENST00000241704 FAXDC2Q96IV6 333 aa11.75□□□□□ -0.53
COPA-201ENST00000241704 PRMT6Q96LA8 375 aaPredicted RBP11.75□□□□□ -0.53
COPA-201ENST00000241704 DPH5Q9H2P9 285 aa11.75□□□□□ -0.53
COPA-201ENST00000241704 ADARB2Q9NS39 739 aaKnown RBP11.75□□□□□ -0.53
COPA-201ENST00000241704 TYW1Q9NV66 732 aaKnown RBP11.75□□□□□ -0.53
COPA-201ENST00000241704 CORO1CQ9ULV4 474 aaPredicted RBP11.75□□□□□ -0.53
COPA-201ENST00000241704 INPP5FQ9Y2H2 1132 aa11.75□□□□□ -0.53
COPA-201ENST00000241704 A0A0U1RQJ8 604 aa11.74□□□□□ -0.53
COPA-201ENST00000241704 UBE2Q2LH0YL09 131 aa11.74□□□□□ -0.53
COPA-201ENST00000241704 CARSP49589 748 aaKnown RBP11.74□□□□□ -0.53
COPA-201ENST00000241704 KIF11P52732 1056 aa11.74□□□□□ -0.53
COPA-201ENST00000241704 PTPAQ15257 358 aa11.74□□□□□ -0.53
COPA-201ENST00000241704 LRRN2O75325 713 aa11.74□□□□□ -0.53
COPA-201ENST00000241704 EYA4O95677 639 aa11.74□□□□□ -0.53
COPA-201ENST00000241704 OATP04181 439 aa11.74□□□□□ -0.53
COPA-201ENST00000241704 PSMC5P62195 406 aa11.74□□□□□ -0.53
COPA-201ENST00000241704 THEMIS2Q5TEJ8 643 aa11.74□□□□□ -0.53
COPA-201ENST00000241704 AGBL2Q5U5Z8 902 aa11.74□□□□□ -0.53
COPA-201ENST00000241704 SLFN12LQ6IEE8 588 aa11.74□□□□□ -0.53
COPA-201ENST00000241704 THNSL1Q8IYQ7 743 aa11.74□□□□□ -0.53
COPA-201ENST00000241704 SPATA33Q96N06 139 aa11.74□□□□□ -0.53
COPA-201ENST00000241704 LXNQ9BS40 222 aa11.74□□□□□ -0.53
COPA-201ENST00000241704 UBE2TQ9NPD8 197 aaPredicted RBP11.74□□□□□ -0.53
COPA-201ENST00000241704 CAPN11Q9UMQ6 739 aa11.74□□□□□ -0.53
COPA-201ENST00000241704 DENND3A2RUS2 1198 aa11.74□□□□□ -0.53
COPA-201ENST00000241704 GFPT2O94808 682 aa11.74□□□□□ -0.53
COPA-201ENST00000241704 FAM163AQ96GL9 167 aaPredicted RBP11.74□□□□□ -0.53
COPA-201ENST00000241704 C7orf25Q9BPX7 421 aa11.74□□□□□ -0.53
COPA-201ENST00000241704 TMEM60Q9H2L4 133 aa11.74□□□□□ -0.53
COPA-201ENST00000241704 TUFT1Q9NNX1 390 aa11.74□□□□□ -0.53
COPA-201ENST00000241704 MRC1P22897 1456 aa11.74□□□□□ -0.53
COPA-201ENST00000241704 SYNJ2BP-COX16A0A087WUM0 186 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms