RNA–Protein interactions for RNA: ENST00000233146.6

MSH2-201, Transcript of mutS homolog 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH2, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-201ENST00000233146 SPDYE16A6NNV3 312 aaPredicted RBP13.94□□□□□ -0.18
MSH2-201ENST00000233146 B4E1Z4 1266 aa13.94□□□□□ -0.18
MSH2-201ENST00000233146 HNRNPDQ14103 355 aaKnown RBP13.94□□□□□ -0.18
MSH2-201ENST00000233146 TMEM67Q5HYA8 995 aa13.94□□□□□ -0.18
MSH2-201ENST00000233146 NEPROQ6NW34 567 aa13.94□□□□□ -0.18
MSH2-201ENST00000233146 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.94□□□□□ -0.18
MSH2-201ENST00000233146 STMN2Q93045 179 aa13.94□□□□□ -0.18
MSH2-201ENST00000233146 SHISA4Q96DD7 197 aa13.94□□□□□ -0.18
MSH2-201ENST00000233146 BHMT2Q9H2M3 363 aa13.94□□□□□ -0.18
MSH2-201ENST00000233146 KCNK9Q9NPC2 374 aa13.94□□□□□ -0.18
MSH2-201ENST00000233146 EMILIN3Q9NT22 766 aa13.94□□□□□ -0.18
MSH2-201ENST00000233146 RASAL2Q9UJF2 1139 aa13.94□□□□□ -0.18
MSH2-201ENST00000233146 PLSCR1O15162 318 aa13.93□□□□□ -0.18
MSH2-201ENST00000233146 ZNF862O60290 1169 aa13.93□□□□□ -0.18
MSH2-201ENST00000233146 PTENP60484 403 aa13.93□□□□□ -0.18
MSH2-201ENST00000233146 IL17AQ16552 155 aa13.93□□□□□ -0.18
MSH2-201ENST00000233146 ZCRB1Q8TBF4 217 aaKnown RBP13.93□□□□□ -0.18
MSH2-201ENST00000233146 FNBP1Q96RU3 617 aa13.93□□□□□ -0.18
MSH2-201ENST00000233146 GSC2O15499 205 aa13.93□□□□□ -0.18
MSH2-201ENST00000233146 LDHAP00338 332 aaKnown RBP13.93□□□□□ -0.18
MSH2-201ENST00000233146 XBP1P17861 261 aa13.93□□□□□ -0.18
MSH2-201ENST00000233146 RELAQ04206 551 aa13.93□□□□□ -0.18
MSH2-201ENST00000233146 KIF22Q14807 665 aa13.93□□□□□ -0.18
MSH2-201ENST00000233146 SAP30BPQ9UHR5 308 aaKnown RBP13.93□□□□□ -0.18
MSH2-201ENST00000233146 ANGPTL2Q9UKU9 493 aa13.93□□□□□ -0.18
MSH2-201ENST00000233146 RIMBP3CA6NJZ7 1639 aa13.93□□□□□ -0.18
MSH2-201ENST00000233146 RIMBP3BA6NNM3 1639 aa13.93□□□□□ -0.18
MSH2-201ENST00000233146 RIMBP3Q9UFD9 1639 aa13.93□□□□□ -0.18
MSH2-201ENST00000233146 FER1L4A9Z1Z3 1794 aa13.93□□□□□ -0.18
MSH2-201ENST00000233146 A0A087X0T9 212 aa13.93□□□□□ -0.18
MSH2-201ENST00000233146 KIAA0391O15091 583 aaKnown RBP13.93□□□□□ -0.18
MSH2-201ENST00000233146 MAGEB2O15479 319 aa13.93□□□□□ -0.18
MSH2-201ENST00000233146 FAM228BP0C875 321 aa13.93□□□□□ -0.18
MSH2-201ENST00000233146 DR1Q01658 176 aa13.93□□□□□ -0.18
MSH2-201ENST00000233146 PPP2R5CQ13362 524 aa13.93□□□□□ -0.18
MSH2-201ENST00000233146 GCKRQ14397 625 aa13.93□□□□□ -0.18
MSH2-201ENST00000233146 CLIP3Q96DZ5 547 aa13.93□□□□□ -0.18
MSH2-201ENST00000233146 BTBD10Q9BSF8 475 aa13.93□□□□□ -0.18
MSH2-201ENST00000233146 PUS7LQ9H0K6 701 aaKnown RBP13.93□□□□□ -0.18
MSH2-201ENST00000233146 TTC7AQ9ULT0 858 aaPredicted RBP13.93□□□□□ -0.18
MSH2-201ENST00000233146 NR2E1Q9Y466 385 aa13.93□□□□□ -0.18
MSH2-201ENST00000233146 NFAT5O94916 1531 aa13.93□□□□□ -0.18
MSH2-201ENST00000233146 FAM187AA6NFU0 413 aa13.92□□□□□ -0.18
MSH2-201ENST00000233146 NEURL1BA8MQ27 555 aa13.92□□□□□ -0.18
MSH2-201ENST00000233146 TIMM10P62072 90 aa13.92□□□□□ -0.18
MSH2-201ENST00000233146 TBL3Q12788 808 aaKnown RBP13.92□□□□□ -0.18
MSH2-201ENST00000233146 CAMK2BQ13554 666 aa13.92□□□□□ -0.18
MSH2-201ENST00000233146 CTC1Q2NKJ3 1217 aa13.92□□□□□ -0.18
MSH2-201ENST00000233146 TAF1BQ53T94 588 aaPredicted RBP13.92□□□□□ -0.18
MSH2-201ENST00000233146 C1orf228Q6PIY5 440 aa13.92□□□□□ -0.18
MSH2-201ENST00000233146 PRICKLE1Q96MT3 831 aaPredicted RBP13.92□□□□□ -0.18
MSH2-201ENST00000233146 SERPINB12Q96P63 405 aa13.92□□□□□ -0.18
MSH2-201ENST00000233146 CGREF1Q99674 301 aa13.92□□□□□ -0.18
MSH2-201ENST00000233146 STK33Q9BYT3 514 aa13.92□□□□□ -0.18
MSH2-201ENST00000233146 GRHL1Q9NZI5 618 aa13.92□□□□□ -0.18
MSH2-201ENST00000233146 CCDC22O60826 627 aa13.92□□□□□ -0.18
MSH2-201ENST00000233146 FGFR4P22455 802 aa13.92□□□□□ -0.18
MSH2-201ENST00000233146 RABL6Q3YEC7 729 aaPredicted RBP13.92□□□□□ -0.18
MSH2-201ENST00000233146 KIAA1755Q5JYT7 1200 aa13.92□□□□□ -0.18
MSH2-201ENST00000233146 KLHDC10Q6PID8 442 aa13.92□□□□□ -0.18
MSH2-201ENST00000233146 RBM44Q6ZP01 1051 aaKnown RBP13.92□□□□□ -0.18
MSH2-201ENST00000233146 SNX24Q9Y343 169 aa13.92□□□□□ -0.18
MSH2-201ENST00000233146 ATP6V0A2Q9Y487 856 aa13.92□□□□□ -0.18
MSH2-201ENST00000233146 EXOC3O60645 756 aa13.92□□□□□ -0.18
MSH2-201ENST00000233146 DDX58O95786 925 aaKnown RBP13.92□□□□□ -0.18
MSH2-201ENST00000233146 POLR2FP61218 127 aaKnown RBP13.92□□□□□ -0.18
MSH2-201ENST00000233146 CYP4A11Q02928 519 aa13.92□□□□□ -0.18
MSH2-201ENST00000233146 CDC16Q13042 620 aa13.92□□□□□ -0.18
MSH2-201ENST00000233146 TCIRG1Q13488 830 aa13.92□□□□□ -0.18
MSH2-201ENST00000233146 TTC38Q5R3I4 469 aa13.92□□□□□ -0.18
MSH2-201ENST00000233146 ARHGEF18Q6ZSZ5 1173 aa13.92□□□□□ -0.18
MSH2-201ENST00000233146 TMTC3Q6ZXV5 915 aa13.92□□□□□ -0.18
MSH2-201ENST00000233146 TUT1Q9H6E5 874 aaKnown RBP13.92□□□□□ -0.18
MSH2-201ENST00000233146 ADAMTS13Q76LX8 1427 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 NBPF26B4DH59 902 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 CBFA2T3O75081 653 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 RARGP13631 454 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 BRAFP15056 766 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 ATP5DP30049 168 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 STRN3Q13033 797 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 LONRF1Q17RB8 773 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 CCDC153Q494R4 210 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 NAALADL2Q58DX5 795 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 PATL1Q86TB9 770 aaKnown RBP13.91□□□□□ -0.18
MSH2-201ENST00000233146 SCAIQ8N9R8 606 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 CEP70Q8NHQ1 597 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 C10orf82Q8WW14 230 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 EBF3Q9H4W6 596 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 GPR108Q9NPR9 543 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 UBAP1Q9NZ09 502 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 TELO2Q9Y4R8 837 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 NR2E3Q9Y5X4 410 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 A8MXQ7 604 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 MATN2O00339 956 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 PLCG2P16885 1265 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 KRT2P35908 639 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 INAQ16352 499 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 MAN2A1Q16706 1144 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 RTN1Q16799 776 aa13.91□□□□□ -0.18
MSH2-201ENST00000233146 SLC45A4Q5BKX6 768 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 832 ms