RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 MIOSQ9NXC5 875 aa15.2■□□□□ 0.02
VEGFA-201ENST00000230480 PIN4Q9Y237 131 aaKnown RBP15.2■□□□□ 0.02
VEGFA-201ENST00000230480 PCDHB7Q9Y5E2 793 aa15.2■□□□□ 0.02
VEGFA-201ENST00000230480 H3BNC9 293 aa15.19■□□□□ 0.02
VEGFA-201ENST00000230480 INO80B-WBP1J3KQ70 363 aa15.19■□□□□ 0.02
VEGFA-201ENST00000230480 SPTLC2O15270 562 aa15.19■□□□□ 0.02
VEGFA-201ENST00000230480 GRM6O15303 877 aa15.19■□□□□ 0.02
VEGFA-201ENST00000230480 MEFVO15553 781 aaPredicted RBP15.19■□□□□ 0.02
VEGFA-201ENST00000230480 PPP6R2O75170 966 aa15.19■□□□□ 0.02
VEGFA-201ENST00000230480 YEATS4O95619 227 aa15.19■□□□□ 0.02
VEGFA-201ENST00000230480 ZSCAN20P17040 1043 aaPredicted RBP15.19■□□□□ 0.02
VEGFA-201ENST00000230480 IBSPP21815 317 aaPredicted RBP15.19■□□□□ 0.02
VEGFA-201ENST00000230480 UBA7P41226 1012 aa15.19■□□□□ 0.02
VEGFA-201ENST00000230480 RAD51AP2Q09MP3 1159 aa15.19■□□□□ 0.02
VEGFA-201ENST00000230480 GIT2Q14161 759 aa15.19■□□□□ 0.02
VEGFA-201ENST00000230480 BTG3Q14201 252 aaPredicted RBP15.19■□□□□ 0.02
VEGFA-201ENST00000230480 FIBCD1Q8N539 461 aa15.19■□□□□ 0.02
VEGFA-201ENST00000230480 PANK2Q9BZ23 570 aa15.19■□□□□ 0.02
VEGFA-201ENST00000230480 ARHGAP28Q9P2N2 729 aa15.19■□□□□ 0.02
VEGFA-201ENST00000230480 PCDHA7Q9UN72 937 aa15.19■□□□□ 0.02
VEGFA-201ENST00000230480 HES2Q9Y543 173 aa15.19■□□□□ 0.02
VEGFA-201ENST00000230480 PCDHB2Q9Y5E7 798 aa15.19■□□□□ 0.02
VEGFA-201ENST00000230480 LRRIQ4A6NIV6 560 aa15.18■□□□□ 0.02
VEGFA-201ENST00000230480 TBKBP1A7MCY6 615 aa15.18■□□□□ 0.02
VEGFA-201ENST00000230480 EOMESO95936 686 aa15.18■□□□□ 0.02
VEGFA-201ENST00000230480 STAG3L1P0CL83 205 aa15.18■□□□□ 0.02
VEGFA-201ENST00000230480 FOSL2P15408 326 aa15.18■□□□□ 0.02
VEGFA-201ENST00000230480 ZNF131P52739 623 aa15.18■□□□□ 0.02
VEGFA-201ENST00000230480 PEX3P56589 373 aa15.18■□□□□ 0.02
VEGFA-201ENST00000230480 TFDP1Q14186 410 aa15.18■□□□□ 0.02
VEGFA-201ENST00000230480 KRI1Q8N9T8 703 aaKnown RBP15.18■□□□□ 0.02
VEGFA-201ENST00000230480 HELQQ8TDG4 1101 aa15.18■□□□□ 0.02
VEGFA-201ENST00000230480 KIFAP3Q92845 792 aa15.18■□□□□ 0.02
VEGFA-201ENST00000230480 KCNN1Q92952 543 aa15.18■□□□□ 0.02
VEGFA-201ENST00000230480 DNAJC19Q96DA6 116 aa15.18■□□□□ 0.02
VEGFA-201ENST00000230480 REEP2Q9BRK0 252 aa15.18■□□□□ 0.02
VEGFA-201ENST00000230480 TMEM117Q9H0C3 514 aa15.18■□□□□ 0.02
VEGFA-201ENST00000230480 NT5C3AQ9H0P0 336 aa15.18■□□□□ 0.02
VEGFA-201ENST00000230480 PDZD7Q9H5P4 517 aa15.18■□□□□ 0.02
VEGFA-201ENST00000230480 PTPRHQ9HD43 1115 aa15.18■□□□□ 0.02
VEGFA-201ENST00000230480 DAXXQ9UER7 740 aaPredicted RBP15.18■□□□□ 0.02
VEGFA-201ENST00000230480 TTC28Q96AY4 2481 aa15.18■□□□□ 0.02
VEGFA-201ENST00000230480 MYMKA6NI61 221 aa15.17■□□□□ 0.02
VEGFA-201ENST00000230480 ACKR2O00590 384 aa15.17■□□□□ 0.02
VEGFA-201ENST00000230480 INPPL1O15357 1258 aa15.17■□□□□ 0.02
VEGFA-201ENST00000230480 ITGB1P05556 798 aa15.17■□□□□ 0.02
VEGFA-201ENST00000230480 HSP90AA1P07900 732 aaKnown RBP15.17■□□□□ 0.02
VEGFA-201ENST00000230480 NCLP19338 710 aaKnown RBP15.17■□□□□ 0.02
VEGFA-201ENST00000230480 STK38Q15208 465 aa15.17■□□□□ 0.02
VEGFA-201ENST00000230480 TWF2Q6IBS0 349 aaKnown RBP15.17■□□□□ 0.02
VEGFA-201ENST00000230480 TMEM161BQ8NDZ6 487 aa15.17■□□□□ 0.02
VEGFA-201ENST00000230480 SPPL3Q8TCT6 385 aa15.17■□□□□ 0.02
VEGFA-201ENST00000230480 ZNF396Q96N95 335 aaPredicted RBP15.17■□□□□ 0.02
VEGFA-201ENST00000230480 HAPLN2Q9GZV7 340 aa15.17■□□□□ 0.02
VEGFA-201ENST00000230480 DACT1Q9NYF0 836 aa15.17■□□□□ 0.02
VEGFA-201ENST00000230480 PLAGL2Q9UPG8 496 aa15.17■□□□□ 0.02
VEGFA-201ENST00000230480 IPPQ9Y573 584 aa15.17■□□□□ 0.02
VEGFA-201ENST00000230480 CNTNAP2Q9UHC6 1331 aa15.17■□□□□ 0.02
VEGFA-201ENST00000230480 NCOR1O75376 2440 aa15.16■□□□□ 0.02
VEGFA-201ENST00000230480 TDRD15B5MCY1 1934 aaKnown RBP15.16■□□□□ 0.02
VEGFA-201ENST00000230480 SLC16A4O15374 487 aa15.16■□□□□ 0.02
VEGFA-201ENST00000230480 DDHD2O94830 711 aa15.16■□□□□ 0.02
VEGFA-201ENST00000230480 SSBP05455 408 aaKnown RBP eCLIP15.16■□□□□ 0.02
VEGFA-201ENST00000230480 PDIA4P13667 645 aaKnown RBP15.16■□□□□ 0.02
VEGFA-201ENST00000230480 AXLP30530 894 aa15.16■□□□□ 0.02
VEGFA-201ENST00000230480 ANP32AP39687 249 aaKnown RBP15.16■□□□□ 0.02
VEGFA-201ENST00000230480 PBX3P40426 434 aa15.16■□□□□ 0.02
VEGFA-201ENST00000230480 DHX8Q14562 1220 aaKnown RBP15.16■□□□□ 0.02
VEGFA-201ENST00000230480 PCBP1Q15365 356 aaKnown RBP eCLIP15.16■□□□□ 0.024e-7■■□□□ 11.7
VEGFA-201ENST00000230480 GPBP1Q86WP2 473 aa15.16■□□□□ 0.02
VEGFA-201ENST00000230480 TMEM173Q86WV6 379 aaPredicted RBP15.16■□□□□ 0.02
VEGFA-201ENST00000230480 ZNF280BQ86YH2 543 aa15.16■□□□□ 0.02
VEGFA-201ENST00000230480 KLHL23Q8NBE8 558 aa15.16■□□□□ 0.02
VEGFA-201ENST00000230480 FBXO22Q8NEZ5 403 aa15.16■□□□□ 0.02
VEGFA-201ENST00000230480 MAFAQ8NHW3 353 aaPredicted RBP15.16■□□□□ 0.02
VEGFA-201ENST00000230480 BCL7CQ8WUZ0 217 aaPredicted RBP15.16■□□□□ 0.02
VEGFA-201ENST00000230480 SPIRE2Q8WWL2 714 aa15.16■□□□□ 0.02
VEGFA-201ENST00000230480 IKZF4Q9H2S9 585 aa15.16■□□□□ 0.02
VEGFA-201ENST00000230480 A0A0C4DFX4 3053 aa15.16■□□□□ 0.02
VEGFA-201ENST00000230480 UNC80Q8N2C7 3258 aa15.16■□□□□ 0.02
VEGFA-201ENST00000230480 CUTAO60888 179 aa15.15■□□□□ 0.02
VEGFA-201ENST00000230480 PRKCBP05771 671 aa15.15■□□□□ 0.02
VEGFA-201ENST00000230480 RB1P06400 928 aa15.15■□□□□ 0.02
VEGFA-201ENST00000230480 PLS3P13797 630 aa15.15■□□□□ 0.02
VEGFA-201ENST00000230480 PROZP22891 400 aa15.15■□□□□ 0.02
VEGFA-201ENST00000230480 IRS1P35568 1242 aa15.15■□□□□ 0.02
VEGFA-201ENST00000230480 GPM6BQ13491 265 aa15.15■□□□□ 0.02
VEGFA-201ENST00000230480 COLGALT1Q8NBJ5 622 aa15.15■□□□□ 0.02
VEGFA-201ENST00000230480 RNF169Q8NCN4 708 aa15.15■□□□□ 0.02
VEGFA-201ENST00000230480 LEO1Q8WVC0 666 aaPredicted RBP15.15■□□□□ 0.02
VEGFA-201ENST00000230480 LARP4BQ92615 738 aaKnown RBP15.15■□□□□ 0.02
VEGFA-201ENST00000230480 CALML4Q96GE6 196 aa15.15■□□□□ 0.02
VEGFA-201ENST00000230480 ZBTB45Q96K62 511 aaPredicted RBP15.15■□□□□ 0.02
VEGFA-201ENST00000230480 CCDC43Q96MW1 224 aaKnown RBP15.15■□□□□ 0.02
VEGFA-201ENST00000230480 SAMD11Q96NU1 681 aa15.15■□□□□ 0.02
VEGFA-201ENST00000230480 STRA6Q9BX79 667 aa15.15■□□□□ 0.02
VEGFA-201ENST00000230480 VN1R3Q9BXE9 311 aa15.15■□□□□ 0.02
VEGFA-201ENST00000230480 FGFBP2Q9BYJ0 223 aa15.15■□□□□ 0.02
VEGFA-201ENST00000230480 NXF3Q9H4D5 531 aaKnown RBP15.15■□□□□ 0.02
VEGFA-201ENST00000230480 TMEM134Q9H6X4 195 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms