RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 FAM109BQ6ICB4 259 aaPredicted RBP6.41□□□□□ -1.38
AFP-201ENST00000226359 RSPH3Q86UC2 560 aa6.41□□□□□ -1.38
AFP-201ENST00000226359 GLG1Q92896 1179 aa6.41□□□□□ -1.38
AFP-201ENST00000226359 SNX21Q969T3 373 aa6.41□□□□□ -1.38
AFP-201ENST00000226359 SLKQ9H2G2 1235 aaPredicted RBP6.41□□□□□ -1.38
AFP-201ENST00000226359 BRD7Q9NPI1 651 aa6.41□□□□□ -1.38
AFP-201ENST00000226359 GTF2IRD1Q9UHL9 959 aa6.41□□□□□ -1.38
AFP-201ENST00000226359 SLC4A7Q9Y6M7 1214 aa6.41□□□□□ -1.38
AFP-201ENST00000226359 EMSYQ7Z589 1322 aa6.41□□□□□ -1.38
AFP-201ENST00000226359 ALPK3Q96L96 1907 aa6.4□□□□□ -1.38
AFP-201ENST00000226359 KIF28PB7ZC32 967 aa6.4□□□□□ -1.38
AFP-201ENST00000226359 CAND2O75155 1236 aa6.4□□□□□ -1.38
AFP-201ENST00000226359 HOXD8P13378 290 aaPredicted RBP6.4□□□□□ -1.38
AFP-201ENST00000226359 SELPP16109 830 aa6.4□□□□□ -1.38
AFP-201ENST00000226359 IFNAR1P17181 557 aa6.4□□□□□ -1.38
AFP-201ENST00000226359 PTGS1P23219 599 aa6.4□□□□□ -1.38
AFP-201ENST00000226359 GBP2P32456 591 aaPredicted RBP6.4□□□□□ -1.38
AFP-201ENST00000226359 EIF4A3P38919 411 aaKnown RBP6.4□□□□□ -1.38
AFP-201ENST00000226359 ARSDP51689 593 aa6.4□□□□□ -1.38
AFP-201ENST00000226359 CCT2P78371 535 aaKnown RBP6.4□□□□□ -1.38
AFP-201ENST00000226359 GRIN2CQ14957 1233 aa6.4□□□□□ -1.38
AFP-201ENST00000226359 RABEP1Q15276 862 aa6.4□□□□□ -1.38
AFP-201ENST00000226359 EFHC2Q5JST6 749 aa6.4□□□□□ -1.38
AFP-201ENST00000226359 C9orf50Q5SZB4 431 aa6.4□□□□□ -1.38
AFP-201ENST00000226359 TMEM63BQ5T3F8 832 aa6.4□□□□□ -1.38
AFP-201ENST00000226359 JAKMIP3Q5VZ66 844 aa6.4□□□□□ -1.38
AFP-201ENST00000226359 FAM160B1Q5W0V3 765 aa6.4□□□□□ -1.38
AFP-201ENST00000226359 LILRB2Q8N423 598 aa6.4□□□□□ -1.38
AFP-201ENST00000226359 SEPT1Q8WYJ6 367 aa6.4□□□□□ -1.38
AFP-201ENST00000226359 HERVK_113Q902F9 699 aa6.4□□□□□ -1.38
AFP-201ENST00000226359 ZNF274Q96GC6 653 aaPredicted RBP6.4□□□□□ -1.38
AFP-201ENST00000226359 MXRA8Q9BRK3 442 aa6.4□□□□□ -1.38
AFP-201ENST00000226359 JPH1Q9HDC5 661 aaPredicted RBP6.4□□□□□ -1.38
AFP-201ENST00000226359 JADE2Q9NQC1 790 aa6.4□□□□□ -1.38
AFP-201ENST00000226359 SH3GLB2Q9NR46 395 aa6.4□□□□□ -1.38
AFP-201ENST00000226359 HDAC6Q9UBN7 1215 aa6.4□□□□□ -1.38
AFP-201ENST00000226359 UBIAD1Q9Y5Z9 338 aa6.4□□□□□ -1.38
AFP-201ENST00000226359 CEP290O15078 2479 aa6.4□□□□□ -1.38
AFP-201ENST00000226359 GRIN2DO15399 1336 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 M0QZ92 97 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 SOX1O00570 391 aaPredicted RBP6.4□□□□□ -1.39
AFP-201ENST00000226359 EREGO14944 169 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 FBXO24O75426 580 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 BAIAP3O94812 1187 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 RPLP1P05386 114 aaKnown RBP6.4□□□□□ -1.39
AFP-201ENST00000226359 ACRP10323 421 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 PDIA3P30101 505 aaKnown RBP6.4□□□□□ -1.39
AFP-201ENST00000226359 CDC27P30260 824 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 SREBF1P36956 1147 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 MRPS9P82933 396 aaKnown RBP6.4□□□□□ -1.39
AFP-201ENST00000226359 FAM160A1Q05DH4 1040 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 HSDL1Q3SXM5 330 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 CEP55Q53EZ4 464 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 TMEM240Q5SV17 173 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 GALNT17Q6IS24 598 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 ZNF365Q70YC5 407 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 LRRC8DQ7L1W4 858 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 NIPA1Q7RTP0 329 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 DEFB128Q7Z7B8 93 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 PLA2G4DQ86XP0 818 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 ATP6V0A1Q93050 837 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 PHKBQ93100 1093 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 TIFAQ96CG3 184 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 SLC9A7Q96T83 725 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 RSRP1Q9BUV0 290 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 AGXT2Q9BYV1 514 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 UPF3BQ9BZI7 483 aaKnown RBP6.4□□□□□ -1.39
AFP-201ENST00000226359 IRF2BPLQ9H1B7 796 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 NUCKS1Q9H1E3 243 aaKnown RBP6.4□□□□□ -1.39
AFP-201ENST00000226359 SMARCAD1Q9H4L7 1026 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 DDX56Q9NY93 547 aaKnown RBP6.4□□□□□ -1.39
AFP-201ENST00000226359 FAM13BQ9NYF5 915 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 ERAP1Q9NZ08 941 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 SLC9A2Q9UBY0 812 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 KCNMB2Q9Y691 235 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 TRIOBPQ9H2D6 2365 aa6.4□□□□□ -1.39
AFP-201ENST00000226359 NFASCO94856 1347 aa6.39□□□□□ -1.39
AFP-201ENST00000226359 MCM3APO60318 1980 aa6.39□□□□□ -1.39
AFP-201ENST00000226359 ESYT3A0FGR9 886 aa6.39□□□□□ -1.39
AFP-201ENST00000226359 RRN3P2A6NIE6 340 aa6.39□□□□□ -1.39
AFP-201ENST00000226359 HSP90AA1P07900 732 aaKnown RBP6.39□□□□□ -1.39
AFP-201ENST00000226359 SMIM10L2AP0DMW4 78 aa6.39□□□□□ -1.39
AFP-201ENST00000226359 SMIM10L2BP0DMW5 78 aa6.39□□□□□ -1.39
AFP-201ENST00000226359 ITGB8P26012 769 aa6.39□□□□□ -1.39
AFP-201ENST00000226359 TCF7P36402 384 aaPredicted RBP6.39□□□□□ -1.39
AFP-201ENST00000226359 PPFIA1Q13136 1202 aa6.39□□□□□ -1.39
AFP-201ENST00000226359 STK3Q13188 491 aa6.39□□□□□ -1.39
AFP-201ENST00000226359 TRIM29Q14134 588 aa6.39□□□□□ -1.39
AFP-201ENST00000226359 CCDC85BQ15834 202 aaPredicted RBP6.39□□□□□ -1.39
AFP-201ENST00000226359 GDF6Q6KF10 455 aaPredicted RBP6.39□□□□□ -1.39
AFP-201ENST00000226359 FBXL19Q6PCT2 694 aa6.39□□□□□ -1.39
AFP-201ENST00000226359 CCDC81Q6ZN84 652 aa6.39□□□□□ -1.39
AFP-201ENST00000226359 NLRP8Q86W28 1048 aa6.39□□□□□ -1.39
AFP-201ENST00000226359 Q8N3U1 123 aa6.39□□□□□ -1.39
AFP-201ENST00000226359 C3orf58Q8NDZ4 430 aa6.39□□□□□ -1.39
AFP-201ENST00000226359 ZNF837Q96EG3 531 aaPredicted RBP6.39□□□□□ -1.39
AFP-201ENST00000226359 SCLYQ96I15 445 aa6.39□□□□□ -1.39
AFP-201ENST00000226359 DNAJC7Q99615 494 aa6.39□□□□□ -1.39
AFP-201ENST00000226359 GPR20Q99678 358 aa6.39□□□□□ -1.39
AFP-201ENST00000226359 NAP1L4Q99733 375 aaKnown RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms