RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 PRKCIP41743 596 aa16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 NSFP46459 744 aaKnown RBP16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 PSMC5P62195 406 aa16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 SGO2Q562F6 1265 aa16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 CIAPIN1Q6FI81 312 aa16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 CACNA2D3Q8IZS8 1091 aa16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 SLC5A5Q92911 643 aa16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 SCLT1Q96NL6 688 aa16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 GDF3Q9NR23 364 aa16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 DNAJC17Q9NVM6 304 aaKnown RBP16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 GABBR1Q9UBS5 961 aa16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 CNOT8Q9UFF9 292 aaKnown RBP16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 DIS3Q9Y2L1 958 aaKnown RBP16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 HSPA6P17066 643 aa16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 CAP2P40123 477 aa16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 PPP2R5CQ13362 524 aa16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 TRIP13Q15645 432 aaPredicted RBP16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 GNPTABQ3T906 1256 aa16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 TADA2BQ86TJ2 420 aa16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 CCDC77Q9BR77 488 aa16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 GLIS2Q9BZE0 524 aaPredicted RBP16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 NSRP1Q9H0G5 558 aaKnown RBP16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 CTNND1O60716 968 aaKnown RBP16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 RFX1P22670 979 aa16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 LSP1P33241 339 aa16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 SPIRE1Q08AE8 756 aa16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 KRT39Q6A163 491 aa16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 SLC30A5Q8TAD4 765 aa16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 LENG9Q96B70 501 aa16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 FAM213AQ9BRX8 229 aa16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 RNF146Q9NTX7 359 aa16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 ANAPC7Q9UJX3 599 aa16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 PPP1R9AQ9ULJ8 1098 aa16.1■□□□□ 0.17
UBE2D4-201ENST00000222402 AGPSO00116 658 aa16.09■□□□□ 0.17
UBE2D4-201ENST00000222402 PIK3CAP42336 1068 aa16.09■□□□□ 0.17
UBE2D4-201ENST00000222402 LMBRD2Q68DH5 695 aaPredicted RBP16.09■□□□□ 0.17
UBE2D4-201ENST00000222402 TAAR1Q96RJ0 339 aa16.09■□□□□ 0.17
UBE2D4-201ENST00000222402 UBE4BO95155 1302 aa16.09■□□□□ 0.17
UBE2D4-201ENST00000222402 FRMPD4Q14CM0 1322 aa16.09■□□□□ 0.17
UBE2D4-201ENST00000222402 ADCY8P40145 1251 aa16.09■□□□□ 0.17
UBE2D4-201ENST00000222402 RWDD2BP57060 319 aa16.09■□□□□ 0.17
UBE2D4-201ENST00000222402 RPS6P62753 249 aaKnown RBP16.09■□□□□ 0.17
UBE2D4-201ENST00000222402 SIAH1Q8IUQ4 282 aa16.09■□□□□ 0.17
UBE2D4-201ENST00000222402 SLC17A8Q8NDX2 589 aa16.09■□□□□ 0.17
UBE2D4-201ENST00000222402 SYNCQ9H7C4 482 aa16.09■□□□□ 0.17
UBE2D4-201ENST00000222402 FRMD3A2A2Y4 597 aa16.09■□□□□ 0.17
UBE2D4-201ENST00000222402 HGSO14964 777 aaPredicted RBP16.09■□□□□ 0.17
UBE2D4-201ENST00000222402 ECEL1O95672 775 aa16.09■□□□□ 0.17
UBE2D4-201ENST00000222402 JAK3P52333 1124 aa16.09■□□□□ 0.17
UBE2D4-201ENST00000222402 KRT76Q01546 638 aa16.09■□□□□ 0.17
UBE2D4-201ENST00000222402 SNRNP35Q16560 246 aaKnown RBP16.09■□□□□ 0.17
UBE2D4-201ENST00000222402 TTMPQ5BVD1 217 aa16.09■□□□□ 0.17
UBE2D4-201ENST00000222402 GKAP1Q5VSY0 366 aaPredicted RBP16.09■□□□□ 0.17
UBE2D4-201ENST00000222402 NAV1Q8NEY1 1877 aa16.09■□□□□ 0.17
UBE2D4-201ENST00000222402 MRRFQ96E11 262 aaKnown RBP16.09■□□□□ 0.17
UBE2D4-201ENST00000222402 P2RX7Q99572 595 aaKnown RBP16.09■□□□□ 0.17
UBE2D4-201ENST00000222402 VIL1P09327 827 aaKnown RBP16.08■□□□□ 0.17
UBE2D4-201ENST00000222402 MDH1P40925 334 aaKnown RBP16.08■□□□□ 0.17
UBE2D4-201ENST00000222402 GTF2A1P52655 376 aaPredicted RBP16.08■□□□□ 0.17
UBE2D4-201ENST00000222402 TKFCQ3LXA3 575 aa16.08■□□□□ 0.17
UBE2D4-201ENST00000222402 BTNL9Q6UXG8 535 aa16.08■□□□□ 0.17
UBE2D4-201ENST00000222402 NT5DC3Q86UY8 548 aa16.08■□□□□ 0.17
UBE2D4-201ENST00000222402 ANKRD42Q8N9B4 389 aa16.08■□□□□ 0.17
UBE2D4-201ENST00000222402 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.08■□□□□ 0.17
UBE2D4-201ENST00000222402 MYH1P12882 1939 aa16.08■□□□□ 0.16
UBE2D4-201ENST00000222402 KLRG2A4D1S0 409 aaPredicted RBP16.08■□□□□ 0.16
UBE2D4-201ENST00000222402 SWSAP1Q6NVH7 229 aa16.08■□□□□ 0.16
UBE2D4-201ENST00000222402 CCDC137Q6PK04 289 aaKnown RBP16.08■□□□□ 0.16
UBE2D4-201ENST00000222402 NLRP14Q86W24 1093 aa16.08■□□□□ 0.16
UBE2D4-201ENST00000222402 PIK3CDO00329 1044 aa16.08■□□□□ 0.16
UBE2D4-201ENST00000222402 RTN2O75298 545 aa16.08■□□□□ 0.16
UBE2D4-201ENST00000222402 ICAM1P05362 532 aa16.08■□□□□ 0.16
UBE2D4-201ENST00000222402 COMTP21964 271 aa16.08■□□□□ 0.16
UBE2D4-201ENST00000222402 TMOD1P28289 359 aa16.08■□□□□ 0.16
UBE2D4-201ENST00000222402 CCND2P30279 289 aa16.08■□□□□ 0.16
UBE2D4-201ENST00000222402 JAG1P78504 1218 aa16.08■□□□□ 0.16
UBE2D4-201ENST00000222402 EN1Q05925 392 aaPredicted RBP16.08■□□□□ 0.16
UBE2D4-201ENST00000222402 MTMR2Q13614 643 aa16.08■□□□□ 0.16
UBE2D4-201ENST00000222402 DCUN1D2Q6PH85 259 aa16.08■□□□□ 0.16
UBE2D4-201ENST00000222402 DPH6Q7L8W6 267 aa16.08■□□□□ 0.16
UBE2D4-201ENST00000222402 CBWD2Q8IUF1 395 aa16.08■□□□□ 0.16
UBE2D4-201ENST00000222402 LNX1Q8TBB1 728 aaPredicted RBP16.08■□□□□ 0.16
UBE2D4-201ENST00000222402 ARHGEF26Q96DR7 871 aa16.08■□□□□ 0.16
UBE2D4-201ENST00000222402 MBOAT7Q96N66 472 aa16.08■□□□□ 0.16
UBE2D4-201ENST00000222402 CARD9Q9H257 536 aa16.08■□□□□ 0.16
UBE2D4-201ENST00000222402 TAS2R14Q9NYV8 317 aa16.08■□□□□ 0.16
UBE2D4-201ENST00000222402 SCN7AQ01118 1682 aa16.08■□□□□ 0.16
UBE2D4-201ENST00000222402 ZNF233A6NK53 670 aa16.07■□□□□ 0.16
UBE2D4-201ENST00000222402 GUCY2CP25092 1073 aa16.07■□□□□ 0.16
UBE2D4-201ENST00000222402 PPP2R2AP63151 447 aa16.07■□□□□ 0.16
UBE2D4-201ENST00000222402 BAATQ14032 418 aaPredicted RBP16.07■□□□□ 0.16
UBE2D4-201ENST00000222402 BMT2Q1RMZ1 405 aa16.07■□□□□ 0.16
UBE2D4-201ENST00000222402 TAOK1Q7L7X3 1001 aa16.07■□□□□ 0.16
UBE2D4-201ENST00000222402 SPATS2Q86XZ4 545 aaKnown RBP16.07■□□□□ 0.16
UBE2D4-201ENST00000222402 FBXL13Q8NEE6 735 aa16.07■□□□□ 0.16
UBE2D4-201ENST00000222402 ELMO3Q96BJ8 720 aa16.07■□□□□ 0.16
UBE2D4-201ENST00000222402 INTS9Q9NV88 658 aaKnown RBP16.07■□□□□ 0.16
UBE2D4-201ENST00000222402 PCDHB4Q9Y5E5 795 aa16.07■□□□□ 0.16
UBE2D4-201ENST00000222402 A0A0A6YYK5 440 aaPredicted RBP16.07■□□□□ 0.16
UBE2D4-201ENST00000222402 EIF3BP55884 814 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms