RNA–Protein interactions for RNA: ENST00000221265.7

PAF1-201, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PAF1, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-201ENST00000221265 WDR59Q6PJI9 974 aa16.54■□□□□ 0.24
PAF1-201ENST00000221265 SLC35F6Q8N357 371 aa16.54■□□□□ 0.24
PAF1-201ENST00000221265 TRPV1Q8NER1 839 aa16.54■□□□□ 0.24
PAF1-201ENST00000221265 PRPF31Q8WWY3 499 aaKnown RBP16.54■□□□□ 0.24
PAF1-201ENST00000221265 BORCS6Q96GS4 357 aa16.54■□□□□ 0.24
PAF1-201ENST00000221265 TTYH3Q9C0H2 523 aa16.54■□□□□ 0.24
PAF1-201ENST00000221265 TMEM206Q9H813 350 aa16.54■□□□□ 0.24
PAF1-201ENST00000221265 ARMCX3Q9UH62 379 aaPredicted RBP16.54■□□□□ 0.24
PAF1-201ENST00000221265 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.54■□□□□ 0.24
PAF1-201ENST00000221265 TRIP12Q14669 1992 aaPredicted RBP16.54■□□□□ 0.24
PAF1-201ENST00000221265 IGKV6-21A0A0C4DH24 114 aa16.54■□□□□ 0.24
PAF1-201ENST00000221265 LRRIQ4A6NIV6 560 aa16.54■□□□□ 0.24
PAF1-201ENST00000221265 HBP1O60381 514 aa16.54■□□□□ 0.24
PAF1-201ENST00000221265 NDUFA10O95299 355 aa16.54■□□□□ 0.24
PAF1-201ENST00000221265 HOXD8P13378 290 aaPredicted RBP16.54■□□□□ 0.24
PAF1-201ENST00000221265 ADSSP30520 456 aa16.54■□□□□ 0.24
PAF1-201ENST00000221265 PRKCZQ05513 592 aa16.54■□□□□ 0.24
PAF1-201ENST00000221265 CAPSQ13938 189 aa16.54■□□□□ 0.24
PAF1-201ENST00000221265 TEX35Q5T0J7 233 aa16.54■□□□□ 0.24
PAF1-201ENST00000221265 FRMD5Q7Z6J6 570 aa16.54■□□□□ 0.24
PAF1-201ENST00000221265 KRT222Q8N1A0 295 aa16.54■□□□□ 0.24
PAF1-201ENST00000221265 TRIB2Q92519 343 aa16.54■□□□□ 0.24
PAF1-201ENST00000221265 ERGIC2Q96RQ1 377 aa16.54■□□□□ 0.24
PAF1-201ENST00000221265 ZMYND15Q9H091 742 aa16.54■□□□□ 0.24
PAF1-201ENST00000221265 H3BRB1 525 aa16.53■□□□□ 0.24
PAF1-201ENST00000221265 SLC16A3O15427 465 aaKnown RBP16.53■□□□□ 0.24
PAF1-201ENST00000221265 EPB41P11171 864 aaKnown RBP16.53■□□□□ 0.24
PAF1-201ENST00000221265 VEGFBP49765 207 aa16.53■□□□□ 0.24
PAF1-201ENST00000221265 BMS1Q14692 1282 aaKnown RBP16.53■□□□□ 0.24
PAF1-201ENST00000221265 FKBP15Q5T1M5 1219 aa16.53■□□□□ 0.24
PAF1-201ENST00000221265 TLK2Q86UE8 772 aa16.53■□□□□ 0.24
PAF1-201ENST00000221265 FAM186BQ8IYM0 893 aa16.53■□□□□ 0.24
PAF1-201ENST00000221265 GPR161Q8N6U8 529 aaKnown RBP16.53■□□□□ 0.24
PAF1-201ENST00000221265 RDH13Q8NBN7 331 aa16.53■□□□□ 0.24
PAF1-201ENST00000221265 SLC17A8Q8NDX2 589 aa16.53■□□□□ 0.24
PAF1-201ENST00000221265 ZNF668Q96K58 619 aaPredicted RBP16.53■□□□□ 0.24
PAF1-201ENST00000221265 TUT1Q9H6E5 874 aaKnown RBP16.53■□□□□ 0.24
PAF1-201ENST00000221265 CDC23Q9UJX2 597 aa16.53■□□□□ 0.24
PAF1-201ENST00000221265 SIK3Q9Y2K2 1263 aa16.53■□□□□ 0.24
PAF1-201ENST00000221265 FHOD1Q9Y613 1164 aa16.53■□□□□ 0.24
PAF1-201ENST00000221265 EPHB6O15197 1021 aa16.52■□□□□ 0.24
PAF1-201ENST00000221265 ZRANB2O95218 330 aaKnown RBP eCLIP16.52■□□□□ 0.24
PAF1-201ENST00000221265 EDN1P05305 212 aa16.52■□□□□ 0.24
PAF1-201ENST00000221265 CNGA1P29973 690 aa16.52■□□□□ 0.24
PAF1-201ENST00000221265 CLCN3P51790 818 aa16.52■□□□□ 0.24
PAF1-201ENST00000221265 KCNH2Q12809 1159 aa16.52■□□□□ 0.24
PAF1-201ENST00000221265 TRIM32Q13049 653 aa16.52■□□□□ 0.24
PAF1-201ENST00000221265 DCAF17Q5H9S7 520 aaPredicted RBP16.52■□□□□ 0.24
PAF1-201ENST00000221265 GOLGA5Q8TBA6 731 aa16.52■□□□□ 0.24
PAF1-201ENST00000221265 CRACR2AQ9BSW2 395 aa16.52■□□□□ 0.24
PAF1-201ENST00000221265 AGPAT5Q9NUQ2 364 aa16.52■□□□□ 0.24
PAF1-201ENST00000221265 ARGLU1Q9NWB6 273 aaPredicted RBP16.52■□□□□ 0.24
PAF1-201ENST00000221265 CASP8AP2Q9UKL3 1982 aa16.52■□□□□ 0.23
PAF1-201ENST00000221265 CTAGE9A4FU28 777 aa16.52■□□□□ 0.23
PAF1-201ENST00000221265 A6NJR5 290 aa16.52■□□□□ 0.23
PAF1-201ENST00000221265 EXOC3O60645 756 aa16.52■□□□□ 0.23
PAF1-201ENST00000221265 C22orf31O95567 290 aa16.52■□□□□ 0.23
PAF1-201ENST00000221265 PSMC2P35998 433 aaKnown RBP16.52■□□□□ 0.23
PAF1-201ENST00000221265 NAMPTP43490 491 aa16.52■□□□□ 0.23
PAF1-201ENST00000221265 APBA1Q02410 837 aa16.52■□□□□ 0.23
PAF1-201ENST00000221265 SP3Q02447 781 aa16.52■□□□□ 0.23
PAF1-201ENST00000221265 KCNMA1Q12791 1236 aa16.52■□□□□ 0.23
PAF1-201ENST00000221265 MEA1Q16626 185 aa16.52■□□□□ 0.23
PAF1-201ENST00000221265 DGKDQ16760 1214 aa16.52■□□□□ 0.23
PAF1-201ENST00000221265 SLC9A9Q8IVB4 645 aa16.52■□□□□ 0.23
PAF1-201ENST00000221265 METTL13Q8N6R0 699 aa16.52■□□□□ 0.23
PAF1-201ENST00000221265 RABGGTAQ92696 567 aa16.52■□□□□ 0.23
PAF1-201ENST00000221265 SLC35C1Q96A29 364 aa16.52■□□□□ 0.23
PAF1-201ENST00000221265 PCMTD1Q96MG8 357 aaPredicted RBP16.52■□□□□ 0.23
PAF1-201ENST00000221265 NUP58Q9BVL2 599 aa16.52■□□□□ 0.23
PAF1-201ENST00000221265 RNF186Q9NXI6 227 aa16.52■□□□□ 0.23
PAF1-201ENST00000221265 HSPBP1Q9NZL4 362 aa16.52■□□□□ 0.23
PAF1-201ENST00000221265 GOLGA8IPA6NC78 632 aa16.51■□□□□ 0.23
PAF1-201ENST00000221265 GOLGA8JA6NMD2 632 aa16.51■□□□□ 0.23
PAF1-201ENST00000221265 SRGAP2CP0DJJ0 459 aa16.51■□□□□ 0.23
PAF1-201ENST00000221265 CHMP4BP1P59074 171 aa16.51■□□□□ 0.23
PAF1-201ENST00000221265 BEX3Q00994 111 aa16.51■□□□□ 0.23
PAF1-201ENST00000221265 LAMTOR4Q0VGL1 99 aa16.51■□□□□ 0.23
PAF1-201ENST00000221265 TCERG1LQ5VWI1 586 aa16.51■□□□□ 0.23
PAF1-201ENST00000221265 IER5Q5VY09 327 aa16.51■□□□□ 0.23
PAF1-201ENST00000221265 EFCAB12Q6NXP0 572 aa16.51■□□□□ 0.23
PAF1-201ENST00000221265 TMCO3Q6UWJ1 677 aa16.51■□□□□ 0.23
PAF1-201ENST00000221265 SRGAP1Q7Z6B7 1085 aa16.51■□□□□ 0.23
PAF1-201ENST00000221265 RETREG2Q8NC44 543 aa16.51■□□□□ 0.23
PAF1-201ENST00000221265 DEPTORQ8TB45 409 aa16.51■□□□□ 0.23
PAF1-201ENST00000221265 GOLGA1Q92805 767 aa16.51■□□□□ 0.23
PAF1-201ENST00000221265 HVCN1Q96D96 273 aa16.51■□□□□ 0.23
PAF1-201ENST00000221265 FAM207AQ9NSI2 230 aaPredicted RBP16.51■□□□□ 0.23
PAF1-201ENST00000221265 MYO1AQ9UBC5 1043 aa16.51■□□□□ 0.23
PAF1-201ENST00000221265 PPME1Q9Y570 386 aa16.51■□□□□ 0.23
PAF1-201ENST00000221265 HNRNPDLO14979 420 aaKnown RBP16.5■□□□□ 0.23
PAF1-201ENST00000221265 XRCC5P13010 732 aaKnown RBP16.5■□□□□ 0.23
PAF1-201ENST00000221265 KLRC1P26715 233 aa16.5■□□□□ 0.23
PAF1-201ENST00000221265 DMTNQ08495 405 aa16.5■□□□□ 0.23
PAF1-201ENST00000221265 IRF5Q13568 498 aa16.5■□□□□ 0.23
PAF1-201ENST00000221265 TUBB2AQ13885 445 aa16.5■□□□□ 0.23
PAF1-201ENST00000221265 TSR1Q2NL82 804 aaKnown RBP16.5■□□□□ 0.23
PAF1-201ENST00000221265 C12orf56Q8IXR9 622 aa16.5■□□□□ 0.23
PAF1-201ENST00000221265 SAAL1Q96ER3 474 aa16.5■□□□□ 0.23
PAF1-201ENST00000221265 TUBB2BQ9BVA1 445 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms