RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 GBP1P32455 592 aa13.27□□□□□ -0.28
TM9SF4-201ENST00000217315 TMEM270Q6UE05 265 aa13.27□□□□□ -0.28
TM9SF4-201ENST00000217315 EFCAB13Q8IY85 973 aa13.27□□□□□ -0.28
TM9SF4-201ENST00000217315 CASKIN2Q8WXE0 1202 aa13.27□□□□□ -0.28
TM9SF4-201ENST00000217315 ZNF408Q9H9D4 720 aa13.27□□□□□ -0.28
TM9SF4-201ENST00000217315 OLFML3Q9NRN5 406 aa13.27□□□□□ -0.28
TM9SF4-201ENST00000217315 A0A087WUV0 522 aaPredicted RBP13.27□□□□□ -0.29
TM9SF4-201ENST00000217315 WDR46O15213 610 aaKnown RBP13.27□□□□□ -0.29
TM9SF4-201ENST00000217315 ZBTB16Q05516 673 aa13.27□□□□□ -0.29
TM9SF4-201ENST00000217315 ZNF668Q96K58 619 aaPredicted RBP13.27□□□□□ -0.29
TM9SF4-201ENST00000217315 ATP6V0A4Q9HBG4 840 aa13.27□□□□□ -0.29
TM9SF4-201ENST00000217315 ADAM22Q9P0K1 906 aa13.27□□□□□ -0.29
TM9SF4-201ENST00000217315 DIS3Q9Y2L1 958 aaKnown RBP13.27□□□□□ -0.29
TM9SF4-201ENST00000217315 NUP188Q5SRE5 1749 aa13.27□□□□□ -0.29
TM9SF4-201ENST00000217315 CRYBG1Q9Y4K1 1723 aa13.27□□□□□ -0.29
TM9SF4-201ENST00000217315 DUOX1Q9NRD9 1551 aa13.27□□□□□ -0.29
TM9SF4-201ENST00000217315 ANXA13P27216 316 aa13.27□□□□□ -0.29
TM9SF4-201ENST00000217315 EPC2Q52LR7 807 aa13.27□□□□□ -0.29
TM9SF4-201ENST00000217315 CCDC137Q6PK04 289 aaKnown RBP13.27□□□□□ -0.29
TM9SF4-201ENST00000217315 CCDC89Q8N998 374 aa13.27□□□□□ -0.29
TM9SF4-201ENST00000217315 IKZF4Q9H2S9 585 aa13.27□□□□□ -0.29
TM9SF4-201ENST00000217315 CLEC11AQ9Y240 323 aa13.27□□□□□ -0.29
TM9SF4-201ENST00000217315 NUP98P52948 1817 aa13.27□□□□□ -0.29
TM9SF4-201ENST00000217315 COL18A1P39060 1754 aa13.26□□□□□ -0.29
TM9SF4-201ENST00000217315 PODXLO00592 558 aa13.26□□□□□ -0.29
TM9SF4-201ENST00000217315 NR3C2P08235 984 aa13.26□□□□□ -0.29
TM9SF4-201ENST00000217315 TMEM253P0C7T8 217 aa13.26□□□□□ -0.29
TM9SF4-201ENST00000217315 RFX1P22670 979 aa13.26□□□□□ -0.29
TM9SF4-201ENST00000217315 EIF3BP55884 814 aaKnown RBP13.26□□□□□ -0.29
TM9SF4-201ENST00000217315 MEI1Q5TIA1 1274 aa13.26□□□□□ -0.29
TM9SF4-201ENST00000217315 SCARA5Q6ZMJ2 495 aa13.26□□□□□ -0.29
TM9SF4-201ENST00000217315 RUBCNQ92622 972 aa13.26□□□□□ -0.29
TM9SF4-201ENST00000217315 LPAR1Q92633 364 aa13.26□□□□□ -0.29
TM9SF4-201ENST00000217315 ANAPC5Q9UJX4 755 aa13.26□□□□□ -0.29
TM9SF4-201ENST00000217315 CD2APQ9Y5K6 639 aa13.26□□□□□ -0.29
TM9SF4-201ENST00000217315 ZKSCAN8Q15776 578 aaPredicted RBP13.26□□□□□ -0.29
TM9SF4-201ENST00000217315 NBPF9Q3BBW0 867 aa13.26□□□□□ -0.29
TM9SF4-201ENST00000217315 ARSHQ5FYA8 562 aa13.26□□□□□ -0.29
TM9SF4-201ENST00000217315 SRLQ86TD4 932 aa13.26□□□□□ -0.29
TM9SF4-201ENST00000217315 C1orf54Q8WWF1 131 aa13.26□□□□□ -0.29
TM9SF4-201ENST00000217315 PLCD4Q9BRC7 762 aa13.26□□□□□ -0.29
TM9SF4-201ENST00000217315 TMEM150BA6NC51 233 aa13.26□□□□□ -0.29
TM9SF4-201ENST00000217315 POC1B-GALNT4F8VUJ3 575 aa13.26□□□□□ -0.29
TM9SF4-201ENST00000217315 TNNC2P02585 160 aa13.26□□□□□ -0.29
TM9SF4-201ENST00000217315 HNRNPH3P31942 346 aaKnown RBP13.26□□□□□ -0.29
TM9SF4-201ENST00000217315 ACOT2P49753 483 aa13.26□□□□□ -0.29
TM9SF4-201ENST00000217315 CCDC13Q8IYE1 715 aa13.26□□□□□ -0.29
TM9SF4-201ENST00000217315 LRRC15Q8TF66 581 aa13.26□□□□□ -0.29
TM9SF4-201ENST00000217315 TRIM11Q96F44 468 aa13.26□□□□□ -0.29
TM9SF4-201ENST00000217315 MRPL47Q9HD33 250 aaKnown RBP13.26□□□□□ -0.29
TM9SF4-201ENST00000217315 N4BP2Q86UW6 1770 aaPredicted RBP13.26□□□□□ -0.29
TM9SF4-201ENST00000217315 F8VZ95 297 aa13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 ATP2A2P16615 1042 aaKnown RBP13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 KCTD19Q17RG1 926 aaPredicted RBP13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 CBWD2Q8IUF1 395 aa13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 THNSL1Q8IYQ7 743 aa13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 ATG4CQ96DT6 458 aa13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 PI4K2AQ9BTU6 479 aa13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 TTYH3Q9C0H2 523 aa13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 POLR3FQ9H1D9 316 aaPredicted RBP13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 SUCLA2Q9P2R7 463 aaPredicted RBP13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 PJA2O43164 708 aa13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 RTN2O75298 545 aa13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 ICAM1P05362 532 aa13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 SPATA31C1P0DKV0 1188 aa13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 DPEP1P16444 411 aa13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 CNGA1P29973 690 aa13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 KCNJ1P48048 391 aa13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 DYNLT1P63172 113 aa13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 SLMAPQ14BN4 828 aa13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 SETDB1Q15047 1291 aa13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 TKFCQ3LXA3 575 aa13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 FAM160B1Q5W0V3 765 aa13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 SAMD7Q7Z3H4 446 aa13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 SPATS2Q86XZ4 545 aaKnown RBP13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 PPP1R14CQ8TAE6 165 aa13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 PPP1R16BQ96T49 567 aa13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 PMS2P54278 862 aa13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 IRX5P78411 483 aaPredicted RBP13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 SULF1Q8IWU6 871 aa13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 ETNPPLQ8TBG4 499 aa13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 NLRP4Q96MN2 994 aa13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 DNAI2Q9GZS0 605 aa13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 KCTD10Q9H3F6 313 aa13.25□□□□□ -0.29
TM9SF4-201ENST00000217315 PFASO15067 1338 aa13.24□□□□□ -0.29
TM9SF4-201ENST00000217315 LRRD1A4D1F6 860 aa13.24□□□□□ -0.29
TM9SF4-201ENST00000217315 DDX3XO00571 662 aaKnown RBP eCLIP13.24□□□□□ -0.295e-8■□□□□ 9.7
TM9SF4-201ENST00000217315 CLDN3O15551 220 aa13.24□□□□□ -0.29
TM9SF4-201ENST00000217315 PPP1R37O75864 691 aa13.24□□□□□ -0.29
TM9SF4-201ENST00000217315 ITGA4P13612 1032 aa13.24□□□□□ -0.29
TM9SF4-201ENST00000217315 COMTP21964 271 aa13.24□□□□□ -0.29
TM9SF4-201ENST00000217315 CHRNA3P32297 505 aa13.24□□□□□ -0.29
TM9SF4-201ENST00000217315 DNAJC24Q6P3W2 148 aa13.24□□□□□ -0.29
TM9SF4-201ENST00000217315 KCTD17Q8N5Z5 321 aa13.24□□□□□ -0.29
TM9SF4-201ENST00000217315 TMEM143Q96AN5 459 aa13.24□□□□□ -0.29
TM9SF4-201ENST00000217315 RNF25Q96BH1 459 aaPredicted RBP13.24□□□□□ -0.29
TM9SF4-201ENST00000217315 HAUS1Q96CS2 278 aa13.24□□□□□ -0.29
TM9SF4-201ENST00000217315 CALR3Q96L12 384 aaKnown RBP13.24□□□□□ -0.29
TM9SF4-201ENST00000217315 PSMD1Q99460 953 aa13.24□□□□□ -0.29
TM9SF4-201ENST00000217315 PRM3Q9NNZ6 103 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms