RNA–Protein interactions for RNA: ENST00000216038.5

RTCB-201, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTCB, Length 2,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-201ENST00000216038 FAM200AQ8TCP9 573 aa10.92□□□□□ -0.66
RTCB-201ENST00000216038 PAWRQ96IZ0 340 aaKnown RBP10.92□□□□□ -0.66
RTCB-201ENST00000216038 OSMRQ99650 979 aa10.92□□□□□ -0.66
RTCB-201ENST00000216038 STRA6Q9BX79 667 aa10.92□□□□□ -0.66
RTCB-201ENST00000216038 INO80BQ9C086 356 aaPredicted RBP10.92□□□□□ -0.66
RTCB-201ENST00000216038 GEMIN8Q9NWZ8 242 aaKnown RBP10.92□□□□□ -0.66
RTCB-201ENST00000216038 ARHGAP28Q9P2N2 729 aa10.92□□□□□ -0.66
RTCB-201ENST00000216038 TBX20Q9UMR3 447 aa10.92□□□□□ -0.66
RTCB-201ENST00000216038 PCDHB13Q9Y5F0 798 aa10.92□□□□□ -0.66
RTCB-201ENST00000216038 RANBP2P49792 3224 aaKnown RBP10.92□□□□□ -0.66
RTCB-201ENST00000216038 ZMYM2Q9UBW7 1377 aa10.91□□□□□ -0.66
RTCB-201ENST00000216038 K7ERI5 159 aa10.91□□□□□ -0.66
RTCB-201ENST00000216038 CLIC2O15247 247 aa10.91□□□□□ -0.66
RTCB-201ENST00000216038 EDN1P05305 212 aa10.91□□□□□ -0.66
RTCB-201ENST00000216038 EN2P19622 333 aaPredicted RBP10.91□□□□□ -0.66
RTCB-201ENST00000216038 THPOP40225 353 aa10.91□□□□□ -0.66
RTCB-201ENST00000216038 GTF2BQ00403 316 aa10.91□□□□□ -0.66
RTCB-201ENST00000216038 TFDP1Q14186 410 aa10.91□□□□□ -0.66
RTCB-201ENST00000216038 IQCB1Q15051 598 aa10.91□□□□□ -0.66
RTCB-201ENST00000216038 KNOP1Q1ED39 458 aaKnown RBP10.91□□□□□ -0.66
RTCB-201ENST00000216038 P2RX5Q93086 422 aa10.91□□□□□ -0.66
RTCB-201ENST00000216038 KCTD10Q9H3F6 313 aa10.91□□□□□ -0.66
RTCB-201ENST00000216038 PCDH10Q9P2E7 1040 aa10.91□□□□□ -0.66
RTCB-201ENST00000216038 BECN2A8MW95 431 aa10.91□□□□□ -0.66
RTCB-201ENST00000216038 EIF3DO15371 548 aaKnown RBP eCLIP10.91□□□□□ -0.66
RTCB-201ENST00000216038 ASAP2O43150 1006 aa10.91□□□□□ -0.66
RTCB-201ENST00000216038 GPR32O75388 356 aa10.91□□□□□ -0.66
RTCB-201ENST00000216038 CAPN2P17655 700 aa10.91□□□□□ -0.66
RTCB-201ENST00000216038 PTENP60484 403 aa10.91□□□□□ -0.66
RTCB-201ENST00000216038 CENPPQ6IPU0 288 aa10.91□□□□□ -0.66
RTCB-201ENST00000216038 TAF2Q6P1X5 1199 aa10.91□□□□□ -0.66
RTCB-201ENST00000216038 STXBP4Q6ZWJ1 553 aa10.91□□□□□ -0.66
RTCB-201ENST00000216038 SLC43A3Q8NBI5 491 aa10.91□□□□□ -0.66
RTCB-201ENST00000216038 TMEM40Q8WWA1 233 aa10.91□□□□□ -0.66
RTCB-201ENST00000216038 DHX38Q92620 1227 aaKnown RBP10.91□□□□□ -0.66
RTCB-201ENST00000216038 BICD1Q96G01 975 aa10.91□□□□□ -0.66
RTCB-201ENST00000216038 DHTKD1Q96HY7 919 aaPredicted RBP10.91□□□□□ -0.66
RTCB-201ENST00000216038 ADAMTS10Q9H324 1103 aa10.91□□□□□ -0.66
RTCB-201ENST00000216038 RWDD2AQ9UIY3 292 aa10.91□□□□□ -0.66
RTCB-201ENST00000216038 SIP14410 1827 aa10.9□□□□□ -0.66
RTCB-201ENST00000216038 ANKRD63C9JTQ0 380 aa10.9□□□□□ -0.66
RTCB-201ENST00000216038 B4GALT5O43286 388 aa10.9□□□□□ -0.66
RTCB-201ENST00000216038 TGFB1I1O43294 461 aa10.9□□□□□ -0.66
RTCB-201ENST00000216038 CCNE1P24864 410 aa10.9□□□□□ -0.66
RTCB-201ENST00000216038 ERCC5P28715 1186 aaPredicted RBP10.9□□□□□ -0.66
RTCB-201ENST00000216038 PHKA2P46019 1235 aa10.9□□□□□ -0.66
RTCB-201ENST00000216038 CDK7P50613 346 aa10.9□□□□□ -0.66
RTCB-201ENST00000216038 MYL5Q02045 173 aa10.9□□□□□ -0.66
RTCB-201ENST00000216038 STRN3Q13033 797 aa10.9□□□□□ -0.66
RTCB-201ENST00000216038 NCAPHQ15003 741 aa10.9□□□□□ -0.66
RTCB-201ENST00000216038 COBLL1Q53SF7 1204 aa10.9□□□□□ -0.66
RTCB-201ENST00000216038 COL13A1Q5TAT6 717 aaPredicted RBP10.9□□□□□ -0.66
RTCB-201ENST00000216038 CDCA2Q69YH5 1023 aaPredicted RBP10.9□□□□□ -0.66
RTCB-201ENST00000216038 TTI2Q6NXR4 508 aa10.9□□□□□ -0.66
RTCB-201ENST00000216038 SLC39A5Q6ZMH5 540 aa10.9□□□□□ -0.66
RTCB-201ENST00000216038 CDR2LQ86X02 465 aaPredicted RBP10.9□□□□□ -0.66
RTCB-201ENST00000216038 ZBTB8OSQ8IWT0 167 aa10.9□□□□□ -0.66
RTCB-201ENST00000216038 CCDC112Q8NEF3 446 aa10.9□□□□□ -0.66
RTCB-201ENST00000216038 ACCSQ96QU6 501 aa10.9□□□□□ -0.66
RTCB-201ENST00000216038 DUSP9Q99956 384 aaKnown RBP10.9□□□□□ -0.66
RTCB-201ENST00000216038 OSBPL7Q9BZF2 842 aa10.9□□□□□ -0.66
RTCB-201ENST00000216038 ST6GALNAC4Q9H4F1 302 aa10.9□□□□□ -0.66
RTCB-201ENST00000216038 SAMSN1Q9NSI8 373 aaKnown RBP10.9□□□□□ -0.66
RTCB-201ENST00000216038 FANCLQ9NW38 375 aa10.9□□□□□ -0.66
RTCB-201ENST00000216038 NFE2L3Q9Y4A8 694 aa10.9□□□□□ -0.66
RTCB-201ENST00000216038 CEP290O15078 2479 aa10.9□□□□□ -0.66
RTCB-201ENST00000216038 TULP1O00294 542 aaPredicted RBP10.89□□□□□ -0.67
RTCB-201ENST00000216038 HNRNPDLO14979 420 aaKnown RBP10.89□□□□□ -0.67
RTCB-201ENST00000216038 PRKCBP05771 671 aa10.89□□□□□ -0.67
RTCB-201ENST00000216038 COL6A1P12109 1028 aa10.89□□□□□ -0.67
RTCB-201ENST00000216038 MBTD1Q05BQ5 628 aa10.89□□□□□ -0.67
RTCB-201ENST00000216038 MAPK6Q16659 721 aa10.89□□□□□ -0.67
RTCB-201ENST00000216038 TPD52L1Q16890 204 aaPredicted RBP10.89□□□□□ -0.67
RTCB-201ENST00000216038 BMT2Q1RMZ1 405 aa10.89□□□□□ -0.67
RTCB-201ENST00000216038 TRIM60Q495X7 471 aa10.89□□□□□ -0.67
RTCB-201ENST00000216038 MAP4K3Q8IVH8 894 aa10.89□□□□□ -0.67
RTCB-201ENST00000216038 FAM126BQ8IXS8 530 aa10.89□□□□□ -0.67
RTCB-201ENST00000216038 NOC3LQ8WTT2 800 aaKnown RBP10.89□□□□□ -0.67
RTCB-201ENST00000216038 ZBTB45Q96K62 511 aaPredicted RBP10.89□□□□□ -0.67
RTCB-201ENST00000216038 TARS2Q9BW92 718 aaKnown RBP10.89□□□□□ -0.67
RTCB-201ENST00000216038 CCDC113Q9H0I3 377 aa10.89□□□□□ -0.67
RTCB-201ENST00000216038 GBP3Q9H0R5 595 aa10.89□□□□□ -0.67
RTCB-201ENST00000216038 PCIF1Q9H4Z3 704 aa10.89□□□□□ -0.67
RTCB-201ENST00000216038 CDY2AQ9Y6F7 541 aa10.89□□□□□ -0.67
RTCB-201ENST00000216038 CHRNA1P02708 482 aa10.89□□□□□ -0.67
RTCB-201ENST00000216038 CYP2J2P51589 502 aa10.89□□□□□ -0.67
RTCB-201ENST00000216038 EFNA5P52803 228 aa10.89□□□□□ -0.67
RTCB-201ENST00000216038 MRPS6P82932 125 aaKnown RBP10.89□□□□□ -0.67
RTCB-201ENST00000216038 PLCB2Q00722 1185 aa10.89□□□□□ -0.67
RTCB-201ENST00000216038 PTPN11Q06124 597 aaPredicted RBP10.89□□□□□ -0.67
RTCB-201ENST00000216038 PTK7Q13308 1070 aa10.89□□□□□ -0.67
RTCB-201ENST00000216038 TMEM132AQ24JP5 1023 aa10.89□□□□□ -0.67
RTCB-201ENST00000216038 ZCWPW2Q504Y3 356 aa10.89□□□□□ -0.67
RTCB-201ENST00000216038 ZNF618Q5T7W0 954 aa10.89□□□□□ -0.67
RTCB-201ENST00000216038 SLC39A4Q6P5W5 647 aa10.89□□□□□ -0.67
RTCB-201ENST00000216038 RSPH3Q86UC2 560 aa10.89□□□□□ -0.67
RTCB-201ENST00000216038 C17orf53Q8N3J3 647 aaPredicted RBP10.89□□□□□ -0.67
RTCB-201ENST00000216038 CSGALNACT2Q8N6G5 542 aa10.89□□□□□ -0.67
RTCB-201ENST00000216038 SLC17A8Q8NDX2 589 aa10.89□□□□□ -0.67
RTCB-201ENST00000216038 ZSWIM2Q8NEG5 633 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms