RNA–Protein interactions for RNA: ENST00000172853.14

NEB-201, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEB, Length 20,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-201ENST00000172853 NXF1Q9UBU9 619 aaKnown RBP3.65□□□□□ -1.82
NEB-201ENST00000172853 POLR1DQ9Y2S0 133 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 MRFAP1Q9Y605 127 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 CHUKO15111 745 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 DMC1Q14565 340 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 E2F4Q16254 413 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 NBPF9Q3BBW0 867 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 ZNF667Q5HYK9 610 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 FAR2Q96K12 515 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 FANCEQ9HB96 536 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 ADAM21Q9UKJ8 722 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 UBA6A0AVT1 1052 aaPredicted RBP3.65□□□□□ -1.82
NEB-201ENST00000172853 AMHP03971 560 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 FDX1P10109 184 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 CLUP10909 449 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 ACAP2Q15057 778 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 SGO2Q562F6 1265 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 USPL1Q5W0Q7 1092 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 CCDC60Q8IWA6 550 aaPredicted RBP3.65□□□□□ -1.82
NEB-201ENST00000172853 SSH3Q8TE77 659 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 ZNF560Q96MR9 790 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 FAM161BQ96MY7 647 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 ECDO95905 644 aaPredicted RBP3.65□□□□□ -1.82
NEB-201ENST00000172853 COMMD2Q86X83 199 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 NELFCDQ8IXH7 590 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 PCMTD2Q9NV79 361 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 HEMK1Q9Y5R4 338 aaPredicted RBP3.65□□□□□ -1.82
NEB-201ENST00000172853 V9GY48 417 aaPredicted RBP3.65□□□□□ -1.82
NEB-201ENST00000172853 PCP11498 1178 aaKnown RBP3.65□□□□□ -1.82
NEB-201ENST00000172853 HCLS1P14317 486 aaPredicted RBP3.65□□□□□ -1.82
NEB-201ENST00000172853 CPA3P15088 417 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 BDH1Q02338 343 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 LRRC8EQ6NSJ5 796 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 ACAD11Q709F0 780 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 MCEMP1Q8IX19 187 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 B3GALNT2Q8NCR0 500 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 C1orf131Q8NDD1 294 aaKnown RBP3.65□□□□□ -1.82
NEB-201ENST00000172853 BBS4Q96RK4 519 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 PANK4Q9NVE7 773 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 VTI1BQ9UEU0 232 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 PASKQ96RG2 1323 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 M0QYT0 321 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 CYP19A1P11511 503 aaPredicted RBP3.65□□□□□ -1.82
NEB-201ENST00000172853 CDH2P19022 906 aaPredicted RBP3.65□□□□□ -1.82
NEB-201ENST00000172853 MAPK4P31152 587 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 DGKKQ5KSL6 1271 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 KIAA1586Q9HCI6 787 aa3.65□□□□□ -1.82
NEB-201ENST00000172853 A0A087X0T9 212 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 SEMA3EO15041 775 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 RASSF9O75901 435 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 HSD17B4P51659 736 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 COPS2P61201 443 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 STX4Q12846 297 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 CYTH1Q15438 398 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 LYSMD3Q7Z3D4 306 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 C11orf96Q7Z7L8 435 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 ARHGEF25Q86VW2 580 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 RASGEF1AQ8N9B8 481 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 KIAA1468Q9P260 1216 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 TRIM33Q9UPN9 1127 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 SLC39A6Q13433 755 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 TBC1D9BQ66K14 1250 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 CEP70Q8NHQ1 597 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 RHPN1Q8TCX5 695 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 WDR60Q8WVS4 1066 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 LPIN2Q92539 896 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 DNMBPQ6XZF7 1577 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 POC1B-GALNT4F8VUJ3 575 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 MTSS1O43312 755 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 MZF1P28698 734 aaPredicted RBP3.65□□□□□ -1.83
NEB-201ENST00000172853 SGCGQ13326 291 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 LINS1Q8NG48 757 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 MRPS31Q92665 395 aaKnown RBP3.65□□□□□ -1.83
NEB-201ENST00000172853 CYP39A1Q9NYL5 469 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 FHOD1Q9Y613 1164 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 HGSO14964 777 aaPredicted RBP3.65□□□□□ -1.83
NEB-201ENST00000172853 CLIC2O15247 247 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 ASAP2O43150 1006 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 OR6A2O95222 327 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 RBM6P78332 1123 aaKnown RBP3.65□□□□□ -1.83
NEB-201ENST00000172853 ACTN3Q08043 901 aaPredicted RBP3.65□□□□□ -1.83
NEB-201ENST00000172853 UGT3A1Q6NUS8 523 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 CCDC127Q96BQ5 260 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 CHST12Q9NRB3 414 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 DYRK1BQ9Y463 629 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 PCDHB11Q9Y5F2 797 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 SLC30A1Q9Y6M5 507 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 CYTH3O43739 400 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 PARNO95453 639 aaKnown RBP3.65□□□□□ -1.83
NEB-201ENST00000172853 HSPA4LO95757 839 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 KCNA2P16389 499 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 BTDP43251 543 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 TCF25Q9BQ70 676 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 MCCC2Q9HCC0 563 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 K7ERI5 159 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 RPLP2P05387 115 aaKnown RBP3.65□□□□□ -1.83
NEB-201ENST00000172853 ITGAXP20702 1163 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 DMTNQ08495 405 aa3.65□□□□□ -1.83
NEB-201ENST00000172853 DYNC1I2Q13409 638 aaKnown RBP3.65□□□□□ -1.83
NEB-201ENST00000172853 PRIMPOLQ96LW4 560 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms