RNA–Protein interactions for RNA: ENST00000055335.10

PPP1R3F-201, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PPP1R3F, Length 3,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-201ENST00000055335 TRAF3IP3Q9Y228 551 aa21.59■■□□□ 1.05
PPP1R3F-201ENST00000055335 ASTN1O14525 1302 aa21.59■■□□□ 1.05
PPP1R3F-201ENST00000055335 LRP5O75197 1615 aa21.59■■□□□ 1.05
PPP1R3F-201ENST00000055335 PDXKO00764 312 aa21.59■■□□□ 1.05
PPP1R3F-201ENST00000055335 TARSP26639 723 aaKnown RBP21.59■■□□□ 1.05
PPP1R3F-201ENST00000055335 CHRNA3P32297 505 aa21.59■■□□□ 1.05
PPP1R3F-201ENST00000055335 PPATQ06203 517 aa21.59■■□□□ 1.05
PPP1R3F-201ENST00000055335 DDB1Q16531 1140 aa21.59■■□□□ 1.05
PPP1R3F-201ENST00000055335 BATF3Q9NR55 127 aa21.59■■□□□ 1.05
PPP1R3F-201ENST00000055335 ARL2BPQ9Y2Y0 163 aa21.59■■□□□ 1.05
PPP1R3F-201ENST00000055335 A0A1W2PRG0 241 aa21.58■■□□□ 1.05
PPP1R3F-201ENST00000055335 RIPK1Q13546 671 aa21.58■■□□□ 1.05
PPP1R3F-201ENST00000055335 SYCP3Q8IZU3 236 aa21.58■■□□□ 1.05
PPP1R3F-201ENST00000055335 MXD3Q9BW11 206 aa21.58■■□□□ 1.05
PPP1R3F-201ENST00000055335 BHMG1C9JSJ3 638 aaPredicted RBP21.58■■□□□ 1.05
PPP1R3F-201ENST00000055335 THAP12O43422 761 aa21.58■■□□□ 1.05
PPP1R3F-201ENST00000055335 SPAG7O75391 227 aa21.58■■□□□ 1.05
PPP1R3F-201ENST00000055335 CYP2W1Q8TAV3 490 aa21.58■■□□□ 1.05
PPP1R3F-201ENST00000055335 ANO3Q9BYT9 981 aa21.58■■□□□ 1.05
PPP1R3F-201ENST00000055335 TRIM7Q9C029 511 aa21.58■■□□□ 1.05
PPP1R3F-201ENST00000055335 MTUS1Q9ULD2 1270 aa21.58■■□□□ 1.05
PPP1R3F-201ENST00000055335 CLDN3O15551 220 aa21.58■■□□□ 1.04
PPP1R3F-201ENST00000055335 CHKAP35790 457 aa21.58■■□□□ 1.04
PPP1R3F-201ENST00000055335 PSMC2P35998 433 aaKnown RBP21.58■■□□□ 1.04
PPP1R3F-201ENST00000055335 PTGIRP43119 386 aa21.58■■□□□ 1.04
PPP1R3F-201ENST00000055335 FMO5P49326 533 aa21.58■■□□□ 1.04
PPP1R3F-201ENST00000055335 MPP2Q14168 576 aa21.58■■□□□ 1.04
PPP1R3F-201ENST00000055335 SLMAPQ14BN4 828 aa21.58■■□□□ 1.04
PPP1R3F-201ENST00000055335 ASPRV1Q53RT3 343 aa21.58■■□□□ 1.04
PPP1R3F-201ENST00000055335 MFSD14BQ5SR56 506 aa21.58■■□□□ 1.04
PPP1R3F-201ENST00000055335 ERMNQ8TAM6 284 aa21.58■■□□□ 1.04
PPP1R3F-201ENST00000055335 ZNF483Q8TF39 744 aaPredicted RBP21.58■■□□□ 1.04
PPP1R3F-201ENST00000055335 RTFDC1Q9BY42 306 aaPredicted RBP21.58■■□□□ 1.04
PPP1R3F-201ENST00000055335 NKIRAS1Q9NYS0 192 aa21.58■■□□□ 1.04
PPP1R3F-201ENST00000055335 ZMYND8Q9ULU4 1186 aaPredicted RBP21.58■■□□□ 1.04
PPP1R3F-201ENST00000055335 CCDC88AQ3V6T2 1871 aa21.58■■□□□ 1.04
PPP1R3F-201ENST00000055335 EXOC3O60645 756 aa21.57■■□□□ 1.04
PPP1R3F-201ENST00000055335 PPP2R5EQ16537 467 aa21.57■■□□□ 1.04
PPP1R3F-201ENST00000055335 RBM26Q5T8P6 1007 aaKnown RBP21.57■■□□□ 1.04
PPP1R3F-201ENST00000055335 CYP4F22Q6NT55 531 aa21.57■■□□□ 1.04
PPP1R3F-201ENST00000055335 KIAA0825Q8IV33 1275 aa21.57■■□□□ 1.04
PPP1R3F-201ENST00000055335 STK33Q9BYT3 514 aa21.57■■□□□ 1.04
PPP1R3F-201ENST00000055335 PITPNM3Q9BZ71 974 aa21.57■■□□□ 1.04
PPP1R3F-201ENST00000055335 SLC5A4Q9NY91 659 aa21.57■■□□□ 1.04
PPP1R3F-201ENST00000055335 NKX1-2Q9UD57 310 aaPredicted RBP21.57■■□□□ 1.04
PPP1R3F-201ENST00000055335 HAO1Q9UJM8 370 aa21.57■■□□□ 1.04
PPP1R3F-201ENST00000055335 FAM196BA6NMK8 535 aa21.57■■□□□ 1.04
PPP1R3F-201ENST00000055335 PODXLO00592 558 aa21.57■■□□□ 1.04
PPP1R3F-201ENST00000055335 RARGP13631 454 aa21.57■■□□□ 1.04
PPP1R3F-201ENST00000055335 RAD23BP54727 409 aa21.57■■□□□ 1.04
PPP1R3F-201ENST00000055335 NPEPPSP55786 919 aa21.57■■□□□ 1.04
PPP1R3F-201ENST00000055335 IRX1P78414 480 aaPredicted RBP21.57■■□□□ 1.04
PPP1R3F-201ENST00000055335 BNIP1Q12981 228 aa21.57■■□□□ 1.04
PPP1R3F-201ENST00000055335 GRIPAP1Q4V328 841 aa21.57■■□□□ 1.04
PPP1R3F-201ENST00000055335 ERP27Q96DN0 273 aa21.57■■□□□ 1.04
PPP1R3F-201ENST00000055335 ANKRD62A6NC57 917 aa21.57■■□□□ 1.04
PPP1R3F-201ENST00000055335 TOM1O60784 492 aa21.57■■□□□ 1.04
PPP1R3F-201ENST00000055335 HOXA13P31271 388 aaPredicted RBP21.57■■□□□ 1.04
PPP1R3F-201ENST00000055335 PRUNE1Q86TP1 453 aa21.57■■□□□ 1.04
PPP1R3F-201ENST00000055335 INTS2Q9H0H0 1204 aaKnown RBP21.57■■□□□ 1.04
PPP1R3F-201ENST00000055335 PARP2Q9UGN5 583 aa21.57■■□□□ 1.04
PPP1R3F-201ENST00000055335 SYNGAP1Q96PV0 1343 aa21.56■■□□□ 1.04
PPP1R3F-201ENST00000055335 PASKQ96RG2 1323 aa21.56■■□□□ 1.04
PPP1R3F-201ENST00000055335 GJC1P36383 396 aa21.56■■□□□ 1.04
PPP1R3F-201ENST00000055335 RPUSD2Q8IZ73 545 aaKnown RBP21.56■■□□□ 1.04
PPP1R3F-201ENST00000055335 C9orf72Q96LT7 481 aa21.56■■□□□ 1.04
PPP1R3F-201ENST00000055335 FRMD4BQ9Y2L6 1034 aa21.56■■□□□ 1.04
PPP1R3F-201ENST00000055335 ARAP2Q8WZ64 1704 aa21.56■■□□□ 1.04
PPP1R3F-201ENST00000055335 ECEL1O95672 775 aa21.56■■□□□ 1.04
PPP1R3F-201ENST00000055335 ZNF131P52739 623 aa21.56■■□□□ 1.04
PPP1R3F-201ENST00000055335 FBF1Q8TES7 1133 aa21.56■■□□□ 1.04
PPP1R3F-201ENST00000055335 INTUQ9ULD6 942 aa21.56■■□□□ 1.04
PPP1R3F-201ENST00000055335 COILP38432 576 aaPredicted RBP21.55■■□□□ 1.04
PPP1R3F-201ENST00000055335 MYL7Q01449 175 aa21.55■■□□□ 1.04
PPP1R3F-201ENST00000055335 MIS18BP1Q6P0N0 1132 aa21.55■■□□□ 1.04
PPP1R3F-201ENST00000055335 HS2ST1Q7LGA3 356 aa21.55■■□□□ 1.04
PPP1R3F-201ENST00000055335 SLC30A5Q8TAD4 765 aa21.55■■□□□ 1.04
PPP1R3F-201ENST00000055335 SPOCK2Q92563 424 aa21.55■■□□□ 1.04
PPP1R3F-201ENST00000055335 RABGAP1Q9Y3P9 1069 aa21.55■■□□□ 1.04
PPP1R3F-201ENST00000055335 PAPPAQ13219 1627 aa21.55■■□□□ 1.04
PPP1R3F-201ENST00000055335 ZBTB5O15062 677 aa21.55■■□□□ 1.04
PPP1R3F-201ENST00000055335 ZNF543Q08ER8 600 aa21.55■■□□□ 1.04
PPP1R3F-201ENST00000055335 DNAJC3Q13217 504 aa21.55■■□□□ 1.04
PPP1R3F-201ENST00000055335 CYP4X1Q8N118 509 aa21.55■■□□□ 1.04
PPP1R3F-201ENST00000055335 NAF1Q96HR8 494 aaKnown RBP21.55■■□□□ 1.04
PPP1R3F-201ENST00000055335 CRAMP1Q96RY5 1269 aa21.55■■□□□ 1.04
PPP1R3F-201ENST00000055335 AP1G2O75843 785 aa21.55■■□□□ 1.04
PPP1R3F-201ENST00000055335 KRT17Q04695 432 aa21.55■■□□□ 1.04
PPP1R3F-201ENST00000055335 VSTM1Q6UX27 236 aa21.55■■□□□ 1.04
PPP1R3F-201ENST00000055335 RNF207Q6ZRF8 634 aa21.55■■□□□ 1.04
PPP1R3F-201ENST00000055335 ZNF804AQ7Z570 1209 aa21.55■■□□□ 1.04
PPP1R3F-201ENST00000055335 AGPAT1Q99943 283 aa21.55■■□□□ 1.04
PPP1R3F-201ENST00000055335 ZSWIM1Q9BR11 485 aa21.55■■□□□ 1.04
PPP1R3F-201ENST00000055335 TGFB1I1O43294 461 aa21.54■■□□□ 1.04
PPP1R3F-201ENST00000055335 ERFP50548 548 aa21.54■■□□□ 1.04
PPP1R3F-201ENST00000055335 UBXN2AP68543 259 aa21.54■■□□□ 1.04
PPP1R3F-201ENST00000055335 TMED2Q15363 201 aa21.54■■□□□ 1.04
PPP1R3F-201ENST00000055335 SGO2Q562F6 1265 aa21.54■■□□□ 1.04
PPP1R3F-201ENST00000055335 RPGRQ92834 1020 aaKnown RBP21.54■■□□□ 1.04
PPP1R3F-201ENST00000055335 KAT5Q92993 513 aa21.54■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms