RNA–Protein interactions for RNA: ENSMUST00000100063.8

Scn9a-201, Transcript of Sodium channel protein type 9 subunit alpha, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Scn9a, Length 9,813 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9a-201ENSMUST00000100063 Kiaa0232Q80U59 1396 aaKnown RBP11.04□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Gm21962L7N280 338 aa11.04□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Mapk6Q61532 720 aa11.04□□□□□ -0.64
Scn9a-201ENSMUST00000100063 F13a1Q8BH61 732 aa11.04□□□□□ -0.64
Scn9a-201ENSMUST00000100063 AbraQ8BUZ1 375 aa11.04□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Spata32Q8C5V0 334 aa11.04□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Uba6Q8C7R4 1053 aa11.04□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Ing3Q8VEK6 421 aa11.04□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Mageb3Q9D2H4 330 aa11.04□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Cyp27a1Q9DBG1 533 aa11.04□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Rhox3cA2AWM0 215 aa11.04□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Rhox3hL7MU37 215 aa11.04□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Rhox3aQ4TU90 215 aa11.04□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Hps6Q8BLY7 805 aa11.04□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Peg3Q3URU2 1571 aa11.04□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Cyp3a57D3YYZ0 503 aa11.04□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Ccdc127Q3TC33 260 aa11.04□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Srek1ip1Q4V9W2 153 aa11.04□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Vav2Q60992 868 aa11.04□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Arhgap26Q6ZQ82 814 aa11.04□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Sh3tc2Q80VA5 1289 aa11.04□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Pramel6Q810Y9 485 aa11.04□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Pdxdc1Q99K01 787 aaKnown RBP11.04□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Apol6B7ZC55 329 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 GartQ64737 1010 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Apol9bQ8C7I4 310 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Trip4Q9QXN3 581 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Krt4P07744 525 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Tmem26Q3UP23 366 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Acbd5Q5XG73 508 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 SyncripQ7TMK9 623 aaKnown RBP11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Haus7Q8BKT8 364 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Ugp2Q91ZJ5 508 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Rprd1bQ9CSU0 326 aaKnown RBP11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Hspa4lP48722 838 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Ankrd13cQ3UX43 541 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Fndc11Q80WB0 326 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Ctdspl2Q8BG15 465 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Pqbp1Q91VJ5 263 aaKnown RBP11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Cyp39a1Q9JKJ9 470 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Stk39Q9Z1W9 556 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 DgkkE9Q7N4 1118 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 P01734 135 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 AcadmP45952 421 aaKnown RBP11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Rnf180Q3U827 592 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 CtcfQ61164 736 aaKnown RBP11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Fam102aQ78T81 392 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Lyve1Q8BHC0 318 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Daam1Q8BPM0 1077 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Agr3Q8R3W7 165 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Lzts3A2AHG0 700 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Mmrn1B2RPV6 1210 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Kcnj2P35561 428 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Cdo1P60334 200 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Surf6P70279 355 aaKnown RBP11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Micu3Q9CTY5 523 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Rbm31yQ9D3U4 565 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Ttc33Q9D6K7 262 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Cyp2c37P56654 490 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Tdpoz3Q717B4 365 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Slitrk1Q810C1 696 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Clic4Q9QYB1 253 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Golga5Q9QYE6 729 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Depdc5P61460 1591 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Cyp2c39P56656 490 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Sash1P59808 1230 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Thoc5Q8BKT7 683 aaKnown RBP11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 IrgqQ8VIM9 583 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Q9D9D9 101 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Grpel1Q99LP6 217 aa11.03□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Skint11A7XV14 364 aa11.02□□□□□ -0.64
Scn9a-201ENSMUST00000100063 A930018M24RikB7ZMY3 218 aa11.02□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Zfp266E9Q2S7 604 aa11.02□□□□□ -0.64
Scn9a-201ENSMUST00000100063 CtshP49935 333 aa11.02□□□□□ -0.64
Scn9a-201ENSMUST00000100063 SftpbP50405 377 aa11.02□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Acot6Q32Q92 419 aa11.02□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Atp11bQ6DFW5 1175 aa11.02□□□□□ -0.64
Scn9a-201ENSMUST00000100063 AarsQ8BGQ7 968 aa11.02□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Pak4Q8BTW9 593 aa11.02□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Tcirg1Q9JHF5 834 aa11.02□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Lcn6A2AJB9 181 aa11.02□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Prl3b1P09586 222 aa11.02□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Man1a1P45700 655 aa11.02□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Frmd8Q3UFK8 466 aa11.02□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Fam81aQ3UXZ6 364 aa11.02□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Kiaa0319lQ8K135 1048 aa11.02□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Aim2Q91VJ1 354 aaKnown RBP11.02□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Ubxn8Q9QZ49 277 aa11.02□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Usp42B2RQC2 1324 aaKnown RBP11.02□□□□□ -0.64
Scn9a-201ENSMUST00000100063 Zmynd8A2A484 1235 aaKnown RBP11.02□□□□□ -0.65
Scn9a-201ENSMUST00000100063 Acad12D3Z7X0 555 aa11.02□□□□□ -0.65
Scn9a-201ENSMUST00000100063 Grem2O88273 168 aa11.02□□□□□ -0.65
Scn9a-201ENSMUST00000100063 DbnlQ62418 436 aa11.02□□□□□ -0.65
Scn9a-201ENSMUST00000100063 Fam196bQ6GQV1 535 aa11.02□□□□□ -0.65
Scn9a-201ENSMUST00000100063 Hdac4Q6NZM9 1076 aa11.02□□□□□ -0.65
Scn9a-201ENSMUST00000100063 Basp1Q91XV3 226 aa11.02□□□□□ -0.65
Scn9a-201ENSMUST00000100063 Tmem206Q9D771 350 aa11.02□□□□□ -0.65
Scn9a-201ENSMUST00000100063 Rnf123Q5XPI3 1314 aa11.02□□□□□ -0.65
Scn9a-201ENSMUST00000100063 Cep70Q6IQY5 616 aa11.02□□□□□ -0.65
Scn9a-201ENSMUST00000100063 Fbxo41Q6NS60 873 aa11.02□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms