RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 RaraP11416 462 aa24.67■■□□□ 1.54
Scn1b-201ENSMUST00000098548 MsnP26041 577 aaKnown RBP24.67■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Zc3h18Q0P678 948 aaKnown RBP24.67■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Agxt2Q3UEG6 513 aa24.67■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Dhx37Q6NZL1 1150 aa24.67■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Lrrn2Q6PHP6 730 aa24.67■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Gjc2Q8BQU6 440 aa24.67■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Ttc26Q8BS45 554 aa24.67■■□□□ 1.54
Scn1b-201ENSMUST00000098548 SucoQ8C341 1250 aa24.67■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Mamdc2Q8CG85 686 aa24.67■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Med15Q924H2 789 aa24.67■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Plagl2Q925T4 496 aa24.67■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Lpin2Q99PI5 893 aa24.67■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Cfap53Q9D439 514 aa24.67■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Nup210lQ9D2F7 1881 aa24.66■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Pate3B3GLJ3 98 aa24.66■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Heatr4E9Q357 955 aa24.66■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Gm4788E9Q8B5 879 aa24.66■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Nmt1O70310 496 aaKnown RBP24.66■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Palb2Q3U0P1 1104 aa24.66■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Rhbdf1Q6PIX5 856 aa24.66■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Bicdl2Q8CHW5 507 aa24.66■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Vopp1Q8R1C3 172 aa24.66■■□□□ 1.54
Scn1b-201ENSMUST00000098548 AagabQ8R2R3 316 aa24.66■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Grin3bQ91ZU9 1003 aa24.66■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Tbc1d15Q9CXF4 671 aa24.66■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Tmem206Q9D771 350 aa24.66■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Fam217aQ9D9W6 419 aa24.66■■□□□ 1.54
Scn1b-201ENSMUST00000098548 PorcnQ9JJJ7 461 aa24.66■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Gm12800B1AUV4 484 aa24.65■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Cntnap3E9PY62 1287 aa24.65■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Gm4841E9QAA8 417 aa24.65■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Gm12794L7MTS5 483 aa24.65■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Ube3aO08759 870 aa24.65■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Kcnh2O35219 1162 aa24.65■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Kpna6O35345 536 aa24.65■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Mdm4O35618 489 aa24.65■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Tap2P36371 702 aa24.65■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Hoxb13P70321 286 aa24.65■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Snx27Q3UHD6 539 aa24.65■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Q5XFZ0 217 aa24.65■■□□□ 1.54
Scn1b-201ENSMUST00000098548 LbpQ61805 481 aa24.65■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Fmnl3Q6ZPF4 1028 aa24.65■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Tubb2aQ7TMM9 445 aa24.65■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Chtf18Q8BIW9 969 aa24.65■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Ppme1Q8BVQ5 386 aa24.65■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Vps52Q8C754 723 aaKnown RBP24.65■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Spice1Q8C804 860 aa24.65■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Prpf31Q8CCF0 499 aaKnown RBP24.65■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Arl8aQ8VEH3 186 aa24.65■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Tubb2bQ9CWF2 445 aa24.65■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Desi2Q9D291 194 aa24.65■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Nol7Q9D7Z3 254 aaKnown RBP24.65■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Ddx25Q9QY15 484 aa24.65■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Adamts9E9PUN6 1931 aa24.64■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Ap1b1O35643 943 aaKnown RBP24.64■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Tnni3P48787 211 aa24.64■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Gng11P61953 73 aa24.64■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Col19a1Q0VF58 1136 aa24.64■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Gemin4Q6P6L6 1058 aaKnown RBP24.64■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Olfr395Q8VGR3 312 aa24.64■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Slc14a1Q8VHL0 384 aa24.64■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Htra3Q9D236 459 aa24.64■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Psma7Q9Z2U0 248 aa24.64■■□□□ 1.54
Scn1b-201ENSMUST00000098548 Cbfa2t2O70374 594 aa24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 TdgP56581 421 aa24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Mark2Q05512 776 aa24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Tcerg1lQ3B807 590 aa24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Capn13Q3UW68 665 aa24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Ccdc42Q5SV66 316 aa24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 EregQ61521 162 aa24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Xpnpep1Q6P1B1 623 aa24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Ppp2r5aQ6PD03 486 aa24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Slc15a5Q8CBB2 566 aa24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Frat2Q8K025 231 aa24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Eif3cQ8R1B4 911 aaKnown RBP24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Tbc1d13Q8R3D1 400 aa24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Luc7lQ9CYI4 371 aaKnown RBP24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Erp44Q9D1Q6 406 aa24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Drc3Q9D5E4 523 aa24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Elf2Q9JHC9 593 aa24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Trpm5Q9JJH7 1158 aa24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Fut2Q9JL27 347 aa24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Akt3Q9WUA6 479 aa24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 A0A286YCQ6 122 aa24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Apol6B7ZC55 329 aa24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Nfe2Q07279 373 aa24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Tmtc1Q3UV71 942 aa24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Mief2Q5NCS9 454 aa24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Nudt16Q6P3D0 195 aa24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Pabpc4Q6PHQ9 660 aaKnown RBP24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Celf6Q7TN33 460 aaKnown RBP24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Pi4kbQ8BKC8 816 aa24.63■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Nfxl1E9Q8I7 918 aaKnown RBP24.62■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Tp53P02340 387 aa24.62■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Trap1aP19473 224 aa24.62■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Tgfbrap1Q3UR70 860 aa24.62■■□□□ 1.53
Scn1b-201ENSMUST00000098548 Gas8Q60779 478 aa24.62■■□□□ 1.53
Scn1b-201ENSMUST00000098548 CtifQ6PEE2 600 aaKnown RBP24.62■■□□□ 1.53
Scn1b-201ENSMUST00000098548 E2f7Q6S7F2 904 aa24.62■■□□□ 1.53
Retrieved 100 of 22,080 RNA–protein pairs in 25.5 ms