RNA–Protein interactions for RNA: ENSMUST00000065304.11

Rtn3-202, Transcript of Reticulon-3, mousemouse

TSL 1 (best) BASIC

Gene Rtn3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn3-202ENSMUST00000065304 Cpb2Q9JHH6 422 aa11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 PigoQ9JJI6 1093 aa11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Caskin1Q6P9K8 1431 aa11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Rfx8D3YU81 596 aa11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Gnrh1P13562 90 aa11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Mybl1P51960 751 aa11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Dpcr1Q3TNW5 500 aa11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Rrp36Q3UFY0 244 aaKnown RBP11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Armcx2Q6A058 784 aaKnown RBP11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Slc44a1Q6X893 653 aa11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Mei4Q8BRM6 389 aa11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Rprd1bQ9CSU0 326 aaKnown RBP11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Polr3eQ9CZT4 710 aa11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Mrto4Q9D0I8 239 aaKnown RBP11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Serpinb1aQ9D154 379 aa11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Ap4s1Q9WVL1 144 aa11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 A0A1Y7VP24 259 aa11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 R3hdm1E9Q9Q2 1135 aaKnown RBP11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Rrm2P11157 390 aa11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Scg3P47867 471 aa11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Ccdc127Q3TC33 260 aa11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Foxred2Q3USW5 665 aa11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 CtcfQ61164 736 aaKnown RBP11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Rusc1Q8BG26 893 aa11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 ClmnQ8C5W0 1052 aa11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 MydgfQ9CPT4 166 aa11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Smyd3Q9CWR2 428 aa11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Dcun1d1Q9QZ73 259 aa11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Naip2Q9QUK4 1447 aa11.87□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Rgs22G3UYX5 1258 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Apoa4P06728 395 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Pik3r1P26450 724 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Uhmk1P97343 419 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Fam178bQ24JP3 464 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 CapslQ6P8Y1 208 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Znf428Q8C1M2 176 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Bud13Q8R149 637 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Mapk13Q9Z1B7 366 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Mbd2Q9Z2E1 414 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Skint6A7XUZ6 1240 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Farp1F8VPU2 1048 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 PuraP42669 321 aaKnown RBP11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 PtpreP49446 699 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Tm6sf1P58749 370 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 RenbpP82343 430 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Esrp1Q3US41 680 aaKnown RBP11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Dcun1d2Q8BZJ7 259 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Nlrp4bQ8C6J9 863 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Med15Q924H2 789 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Cep97Q9CZ62 856 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Capn9Q9D805 690 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Iqcf1Q9D9K8 182 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Naip7Q9JIB3 1402 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Naip6Q9JIB6 1403 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Pard6bQ9JK83 371 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Usp14Q9JMA1 493 aaKnown RBP11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Rgs2O08849 211 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Arpp19P56212 112 aaKnown RBP11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Cyp11b1Q3TG86 501 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 HexdcQ3U4H6 486 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Ccdc51Q3URS9 406 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 PighQ5M9N4 188 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Mapk6Q61532 720 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Gstt1Q64471 240 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Krt42Q6IFX2 452 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Ctdspl2Q8BG15 465 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Ddx18Q8K363 660 aaKnown RBP11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Brd8Q8R3B7 951 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Msi2Q920Q6 346 aaKnown RBP11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Dkc1Q9ESX5 509 aaKnown RBP11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Ddx25Q9QY15 484 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Ccdc141E9Q8Q6 1531 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Gm8237E9Q257 205 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Ap1g2O88512 791 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Fam167bP17257 162 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Papd5Q68ED3 633 aaKnown RBP11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 PolnQ7TQ07 864 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Rhot1Q8BG51 631 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Apol9bQ8C7I4 310 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Cfap61Q8CEL2 1252 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Appl1Q8K3H0 707 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Pdlim2Q8R1G6 349 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Apol9aQ8VDU3 310 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Prmt3Q922H1 532 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Tgs1Q923W1 853 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Tex13bQ99MW5 186 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 FopnlQ9CZS3 174 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Tmem206Q9D771 350 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Spata31d1bE9QA57 1361 aa11.86□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Zfp408H7BX78 710 aa11.85□□□□□ -0.51
Rtn3-202ENSMUST00000065304 ChrngP04760 519 aa11.85□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Ogfod1Q3U0K8 545 aa11.85□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Znf496Q5SXI5 585 aa11.85□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Avpr1aQ62463 423 aa11.85□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Oxsr1Q6P9R2 527 aa11.85□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Dpp8Q80YA7 892 aa11.85□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Ccdc59Q8R2N0 240 aaKnown RBP11.85□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Q9CQF4 240 aa11.85□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Fam162aQ9D6U8 155 aa11.85□□□□□ -0.51
Rtn3-202ENSMUST00000065304 Orc6Q9WUJ8 262 aa11.85□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 64.1 ms