RNA–Protein interactions for RNA: ENSMUST00000063588.10

Vamp1-202, Transcript of Vesicle-associated membrane protein 1, mousemouse

TSL 2 BASIC

Gene Vamp1, Length 1,400 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1-202ENSMUST00000063588 Zfp623Q9CY99 499 aa12.24□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Cnga3Q9JJZ8 631 aa12.24□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Trp53inp1Q9QXE4 239 aa12.24□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Zranb2Q9R020 330 aaKnown RBP12.24□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Rnf103Q9R1W3 683 aa12.24□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Arih1Q9Z1K5 555 aa12.24□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Ank3G5E8K5 1961 aa12.24□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Mmrn2A6H6E2 943 aa12.23□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Pdzrn4E9PUZ9 1014 aa12.23□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Efna5O08543 228 aa12.23□□□□□ -0.45
Vamp1-202ENSMUST00000063588 XlrP05531 208 aa12.23□□□□□ -0.45
Vamp1-202ENSMUST00000063588 GclcP97494 637 aa12.23□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Rnf113a2Q14B01 337 aa12.23□□□□□ -0.45
Vamp1-202ENSMUST00000063588 LbrQ3U9G9 626 aaKnown RBP12.23□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Gpr162Q3UN16 588 aa12.23□□□□□ -0.45
Vamp1-202ENSMUST00000063588 ItgadQ3V0T4 1168 aa12.23□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Asap3Q5U464 904 aa12.23□□□□□ -0.45
Vamp1-202ENSMUST00000063588 ItgaeQ60677 1167 aa12.23□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Pacsin1Q61644 441 aa12.23□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Ncapg2Q6DFV1 1138 aa12.23□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Atp6v0d2Q80SY3 350 aa12.23□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Znf579Q80VM4 562 aa12.23□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Map3k11Q80XI6 850 aa12.23□□□□□ -0.45
Vamp1-202ENSMUST00000063588 N4bp3Q8C7U1 537 aa12.23□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Fbxo43Q8CDI2 640 aa12.23□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Mmgt1Q8K273 131 aaKnown RBP12.23□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Atp2a1Q8R429 994 aa12.23□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Wrap53Q8VC51 532 aa12.23□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Rnf25Q9QZR0 456 aa12.23□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Twf2Q9Z0P5 349 aaKnown RBP12.23□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Robo3Q9Z2I4 1366 aa12.23□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Arid2E9Q7E2 1828 aa12.23□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Ralgapa2A3KGS3 1872 aa12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Sclt1G5E861 688 aa12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 P01734 135 aa12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 MybP06876 636 aa12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Lmnb2P21619 596 aaKnown RBP12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Map2k1P31938 393 aa12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Fmr1P35922 614 aaKnown RBP12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Morf4l1P60762 362 aa12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Polr2fP61219 127 aa12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 CiitaP79621 1155 aa12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Cul4aQ3TCH7 759 aa12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Q3TTJ4 293 aa12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Olfm4Q3UZZ4 505 aa12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Ece1Q4PZA2 769 aa12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 IbspQ61711 324 aa12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 KaznQ69ZS8 779 aa12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Mtmr10Q7TPM9 771 aa12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Depdc1bQ8BH88 529 aa12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Lrrc24Q8BHA1 521 aa12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Fbxo44Q8BK26 255 aa12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Kctd6Q8BNL5 237 aa12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Vmn1r218Q8R261 298 aa12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Sgip1Q8VD37 806 aa12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Olfr395Q8VGR3 312 aa12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Srgap2Q91Z67 1071 aa12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Psmd6Q99JI4 389 aa12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Tmem206Q9D771 350 aa12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Hyou1Q9JKR6 999 aaKnown RBP12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Astn1Q61137 1302 aa12.22□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Aoc3O70423 765 aa12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Alkbh1P0CB42 389 aa12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Il2rbP16297 539 aa12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Gna15P30678 374 aa12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Scp2P32020 547 aaKnown RBP12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Pik3caP42337 1068 aa12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Gfpt1P47856 697 aa12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Tnni3P48787 211 aa12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Anp32eP97822 260 aaKnown RBP12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 HmmrQ00547 794 aaKnown RBP12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 SelpQ01102 768 aa12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Btg1-ps1Q3V0S2 161 aa12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Btg1-ps2Q3V0X0 161 aa12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Mkrn3Q60764 544 aa12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Trim37Q6PCX9 961 aa12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 NfrkbQ6PIJ4 1296 aaKnown RBP12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Nucks1Q80XU3 234 aaKnown RBP12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Tcaf1Q8BNE1 924 aa12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Lrrc45Q8CIM1 670 aa12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Ago2Q8CJG0 860 aaKnown RBP12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Ctage5Q8R311 779 aa12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Hdhd5Q91WM2 419 aa12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Ubxn1Q922Y1 297 aa12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Znf687Q9D2D7 1237 aa12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Rbm31yQ9D3U4 565 aa12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Llcfc1Q9D9P8 108 aa12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Tbx20Q9ES03 445 aa12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Uchl3Q9JKB1 230 aa12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 EmcnQ9R0H2 261 aa12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Tmem131O70472 1877 aa12.21□□□□□ -0.45
Vamp1-202ENSMUST00000063588 Pds5aQ6A026 1332 aa12.21□□□□□ -0.46
Vamp1-202ENSMUST00000063588 Gm7086A0A1W2P766 342 aa12.2□□□□□ -0.46
Vamp1-202ENSMUST00000063588 Fam71aB7XG49 585 aa12.2□□□□□ -0.46
Vamp1-202ENSMUST00000063588 Zfp266E9Q2S7 604 aa12.2□□□□□ -0.46
Vamp1-202ENSMUST00000063588 Enc1O35709 589 aa12.2□□□□□ -0.46
Vamp1-202ENSMUST00000063588 Apba3O88888 571 aa12.2□□□□□ -0.46
Vamp1-202ENSMUST00000063588 Ptgs2Q05769 604 aa12.2□□□□□ -0.46
Vamp1-202ENSMUST00000063588 Atp8b1Q148W0 1251 aa12.2□□□□□ -0.46
Vamp1-202ENSMUST00000063588 Wdr18Q4VBE8 431 aa12.2□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms