RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 BC051142Q3V0M8 400 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 FancbQ5XJY6 703 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 SkiQ60698 725 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Raver2Q7TPD6 673 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Kcnf1Q7TSH7 493 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Nod1Q8BHB0 953 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 BrdtQ91Y44 956 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Spc24Q9D083 201 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Anapc7Q9WVM3 565 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Supt3B0QZW4 406 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Trove2O08848 538 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Psmc4P54775 418 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Psmc1P62192 440 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Pstpip1P97814 415 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Fam92bQ3V2J0 292 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Gja3Q64448 417 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Cdc14aQ6GQT0 603 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Llgl1Q80Y17 1036 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Git2Q9JLQ2 708 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Tex13c2A0A0G2JGA3 530 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Fgd3O88842 733 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Cd86P42082 309 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Tdpoz2Q717B2 364 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Uba6Q8C7R4 1053 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Spice1Q8C804 860 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Gm43738A0A0G2JEA5 862 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Ugt1a8D3Z748 530 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Ugt1a10E9PXN7 530 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Apba3O88888 571 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Siah1aP61092 282 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Celf6Q7TN33 460 aaKnown RBP12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Q8BGN9 141 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Trim32Q8CH72 655 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Cpa5Q8R4H4 436 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Grin3bQ91ZU9 1003 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Trim54Q9ERP3 366 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Vnn1Q9Z0K8 512 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Krt36B1AQ75 473 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Olfr1354E9Q5G9 310 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Erbb2P70424 1256 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Tlr11Q6R5P0 926 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Agap1Q8BXK8 857 aaKnown RBP12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 NcaphQ8C156 731 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 MyripQ8K3I4 856 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Art2bO35975 289 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Vcam1P29533 739 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Tmem109Q3UBX0 243 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Ece1Q4PZA2 769 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Psmd5Q8BJY1 504 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Rps6ka5Q8C050 863 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Calhm6Q8C9E8 313 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Rrp1bQ91YK2 724 aaKnown RBP12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Rassf3Q99P51 232 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Tlr2Q9QUN7 784 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 RarbP22605 482 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Fen1P39749 378 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 TdgP56581 421 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Chp1P61022 195 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Fgfr4Q03142 799 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Neurl1bQ0MW30 546 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Sez6lQ6P1D5 963 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 AmphQ7TQF7 686 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Ccdc68Q8BVC4 333 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Snx10Q9CWT3 201 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 PrameQ9D4Z5 464 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 MefvQ9JJ26 767 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Syngap1F6SEU4 1340 aa12.68□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Gm5483B2RV77 97 aa12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Mdh1P14152 334 aa12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Lilrb3P97484 841 aa12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 BcrQ6PAJ1 1270 aa12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 C2cd5Q7TPS5 1016 aaKnown RBP12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Tcp10aQ80W76 438 aa12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Nop9Q8BMC4 636 aaKnown RBP12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Tc2nQ91XT6 489 aa12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Cpsf3Q9QXK7 684 aa12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Mrc1Q61830 1456 aa12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Il2P04351 169 aa12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Ranbp1P34022 203 aaKnown RBP12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Tp53i13Q5F267 385 aa12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Fam83aQ8K2P2 436 aa12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Smc6Q924W5 1097 aa12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Gipc1Q9Z0G0 333 aa12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Gm3371F7CQW8 167 aa12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Agap2Q3UHD9 1186 aa12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 TfrcQ62351 763 aaKnown RBP12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Acbd3Q8BMP6 525 aa12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Q922C1 641 aa12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Zc3h4Q6ZPZ3 1304 aaKnown RBP12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Nwd2Q6P5U7 1742 aa12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Mboat4P0C7A3 435 aa12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 SnrpfP62307 86 aaKnown RBP12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 PRAG1Q571I4 1179 aa12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Tph2Q8CGV2 488 aa12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Pcdha11Q91Y19 950 aa12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Arl2bpQ9D385 163 aa12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Krt27Q9Z320 448 aa12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Serpinb3aG3X9V8 387 aa12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Rasa2P58069 847 aa12.67□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Gm4981Q3ULJ8 291 aa12.67□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 17 ms