RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Cdk4P30285 303 aa17.63■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Mageb18Q8BQR7 327 aa17.63■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Maged2Q9ER67 616 aa17.63■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Pcdh11xF6ZNL5 1338 aa17.63■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 PdxkQ8K183 312 aa17.63■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Nrbf2Q8VCQ3 287 aa17.63■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 NonoQ99K48 473 aaKnown RBP17.63■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Vps33aQ9D2N9 598 aa17.63■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Polr3cQ9D483 533 aa17.63■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Rreb1Q3UH06 1700 aaKnown RBP17.63■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Ercc6l2Q9JIM3 1537 aa17.62■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 E230025N22RikG5E8S3 482 aa17.62■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Mup5P11591 180 aa17.62■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 PpargP37238 505 aa17.62■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Krt86P97861 486 aa17.62■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 PighQ5M9N4 188 aa17.62■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Gpr101Q80T62 511 aa17.62■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Spice1Q8C804 860 aa17.62■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Vmn1r213Q8R278 384 aa17.62■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 ParvaQ9EPC1 372 aa17.62■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Doc2gQ9ESN1 387 aa17.62■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Gm15262A0A140LIQ5 728 aa17.62■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Cyp2c68K7N6C2 491 aa17.62■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Rc3h1Q4VGL6 1130 aaKnown RBP17.62■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 WdpcpQ8C456 722 aa17.62■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 P3h4Q8K2B0 443 aa17.62■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Cdk5rap3Q99LM2 503 aa17.62■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Rrp15Q9CYX7 281 aaKnown RBP17.62■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Lyve1Q8BHC0 318 aa17.62■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Morc4Q8BMD7 928 aa17.62■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Palm2Q8BR92 376 aa17.62■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Inpp5fQ8CDA1 1132 aa17.62■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Hdac11Q91WA3 347 aa17.62■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 RnmtQ9D0L8 465 aaKnown RBP17.62■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Nr1h3Q9Z0Y9 445 aa17.62■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Slc8a3S4R2P9 928 aa17.62■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Tcp11x2A2AEI7 503 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Zfp850J3QPC5 689 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Ext2P70428 718 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Myo19Q5SV80 963 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Itih3Q61704 889 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Slc39a11Q8BWY7 342 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Znrd1-asQ8R0E5 213 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Hspbp1Q99P31 357 aaKnown RBP17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Slc40a1Q9JHI9 570 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Fmnl1Q9JL26 1094 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Abhd2Q9QXM0 425 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Zfp626A0A0U1RQ84 676 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Soat2O88908 525 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Vps4bP46467 444 aaKnown RBP17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 InscQ3HNM7 579 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Edrf1Q6GQV7 1239 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Tmc4Q7TQ65 694 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Vps39Q8R5L3 886 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Slc5a5Q99PN0 618 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Tex9Q9D845 387 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Dbn1Q9QXS6 706 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Fndc1E9Q043 1732 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Slc1a1P51906 523 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Cyth2P63034 400 aaKnown RBP17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 PRAG1Q571I4 1179 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Slx1bQ8BX32 270 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 CgasQ8C6L5 507 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Btbd7Q8CFE5 1130 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Snx2Q9CWK8 519 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Serpinb3cA2RSF9 386 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Foxred2Q3USW5 665 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Tdpoz4Q6YCH2 370 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Stkld1Q80YS9 662 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 FtoQ8BGW1 502 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Bcs1lQ9CZP5 418 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Rpf2Q9JJ80 306 aaKnown RBP17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Usp31E9Q6Y8 1344 aa17.61■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Osbpl9A2A8Z1 736 aa17.6■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 TxnP10639 105 aaKnown RBP17.6■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Prr7Q3V0I2 269 aa17.6■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Dpf2Q61103 391 aaKnown RBP17.6■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 CpQ61147 1061 aa17.6■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Tdrd3Q91W18 743 aaKnown RBP17.6■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Rfx8D3YU81 596 aa17.6■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Cops2P61202 443 aaKnown RBP17.6■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Acbd5Q5XG73 508 aa17.6■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Nlrp4eQ66X19 978 aa17.6■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Slc38a7Q8BWH0 463 aa17.6■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Olfr1494Q8VGP8 315 aa17.6■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Ppp1r2Q9DCL8 206 aa17.6■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 SftpdP50404 374 aa17.6■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 RubcnlQ3TD16 648 aa17.6■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Nt5c2Q3V1L4 560 aa17.6■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Tdpoz2Q717B2 364 aa17.6■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Lrrc14Q8VC16 493 aa17.6■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Dtnbp1Q91WZ8 352 aa17.6■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Tceal1Q921P9 165 aa17.6■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Rtl9Q32KG4 1339 aa17.6■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Ssc5dQ8BV57 1371 aa17.6■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Stam2O88811 523 aa17.6■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 CraddO88843 199 aa17.6■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Otud5Q3U2S4 566 aa17.6■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Ipo5Q8BKC5 1097 aaKnown RBP17.6■□□□□ 0.41
Ubfd1-201ENSMUST00000033158 Rtn3Q9ES97 964 aa17.6■□□□□ 0.41
Retrieved 100 of 22,080 RNA–protein pairs in 45.4 ms