RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Tdrd3Q91W18 743 aaKnown RBP20.19■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Ranbp17Q99NF8 1088 aa20.19■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Arhgef25Q9CWR0 618 aa20.19■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Tcirg1Q9JHF5 834 aa20.19■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 SpdyaQ5IBH7 310 aa20.18■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 AlcamQ61490 583 aa20.18■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Styk1Q6J9G1 429 aa20.18■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 PicalmQ7M6Y3 660 aaKnown RBP20.18■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Gpr101Q80T62 511 aa20.18■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Unc5bQ8K1S3 945 aa20.18■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Ssr1Q9CY50 286 aaKnown RBP20.18■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 1700109H08RikQ9D9C0 210 aa20.18■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Mta2Q9R190 668 aa20.18■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Orc1Q9Z1N2 840 aaKnown RBP20.18■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Sned1Q70E20 1403 aa20.18■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Tbc1d16A2ABG4 766 aa20.17■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Mmrn1B2RPV6 1210 aa20.17■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 VimP20152 466 aaKnown RBP20.17■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Prr7Q3V0I2 269 aa20.17■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Ddx49Q4FZF3 480 aaKnown RBP20.17■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Trim65Q8BFW4 522 aa20.17■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Fbxo28Q8BIG4 368 aa20.17■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Znf771Q8BJ90 317 aa20.17■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Sun2Q8BJS4 731 aa20.17■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Rtp1Q8C8C1 263 aa20.17■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Slc26a6Q8CIW6 758 aa20.17■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Nmrk1Q91W63 195 aa20.17■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Xpo6Q924Z6 1125 aa20.17■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Hspbp1Q99P31 357 aaKnown RBP20.17■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Extl3Q9WVL6 918 aa20.17■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Gm4297D3YWB7 211 aa20.17■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Prl6a1O35257 230 aa20.17■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 CtshP49935 333 aa20.17■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Erbb2P70424 1256 aa20.17■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Nyap1Q6PFX7 833 aa20.17■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Vps36Q91XD6 386 aa20.17■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Xab2Q9DCD2 855 aaKnown RBP20.17■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Tacc3Q9JJ11 631 aa20.17■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Fam205a1D3YZF6 1314 aa20.17■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 1700018F24RikB2RW27 314 aa20.16■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Slc1a1P51906 523 aa20.16■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Fam207aP58468 219 aaKnown RBP20.16■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 OgdhQ60597 1023 aaKnown RBP20.16■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Serpinb6Q60854 378 aa20.16■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Tmem117Q8BH18 514 aa20.16■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 RalylQ8BTF8 293 aa20.16■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Pcdha5Q91Y15 934 aa20.16■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Cep19Q9CQA8 163 aa20.16■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Fam133bQ9CVI2 245 aaKnown RBP20.16■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Ccdc91Q9D8L5 442 aa20.16■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Cpne8Q9DC53 577 aa20.16■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Cacna2d3Q9Z1L5 1091 aa20.16■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Cfap221A9Q751 836 aa20.16■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Dhx15O35286 795 aaKnown RBP20.16■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Hmgb2P30681 210 aaKnown RBP20.16■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Msh2P43247 935 aaKnown RBP20.16■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Lmntd2Q0VET5 664 aa20.16■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Syne3Q4FZC9 975 aa20.16■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Kcnt1Q6ZPR4 1224 aa20.16■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 TwistnbQ78WZ7 330 aaKnown RBP20.16■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Rccd1Q8BTU7 377 aa20.16■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Efl1Q8C0D5 1127 aa20.16■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Gpsm2Q8VDU0 679 aa20.16■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Pls3Q99K51 630 aa20.16■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Kcnh7Q9ER47 1195 aa20.16■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Serpinb6cW4VSP4 379 aa20.16■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Cntnap5cQ0V8T7 1305 aa20.16■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Irf8P23611 424 aa20.15■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Mgat1P27808 447 aa20.15■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 LxnP70202 222 aa20.15■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Tex35Q14BK3 207 aa20.15■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Slc7a6osQ7TPE5 306 aa20.15■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Olfml3Q8BK62 406 aa20.15■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Fsd1lQ8BYN5 507 aa20.15■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Znf830Q8R1N0 363 aaKnown RBP20.15■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Pcdhgb4Q91XX6 912 aa20.15■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Ttc1Q91Z38 292 aa20.15■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Gps2Q921N8 327 aa20.15■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Q922C1 641 aa20.15■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Gimap4Q99JY3 219 aa20.15■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Phf2Q9WTU0 1096 aa20.15■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Entpd5Q9WUZ9 427 aa20.15■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 rp9P97762 213 aa20.15■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Gm10488Q4KL05 212 aa20.15■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Apol9bQ8C7I4 310 aa20.15■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Calhm6Q8C9E8 313 aa20.15■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Tut1Q8R3F9 869 aa20.15■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Apol9aQ8VDU3 310 aa20.15■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Vmn2r63E9Q0K5 859 aa20.14■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Gm9268E9Q0M3 861 aa20.14■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Vmn2r62K7N712 859 aa20.14■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Kif5cP28738 956 aaKnown RBP20.14■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Gtf2bP62915 316 aa20.14■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 R3hdm4Q4VBF2 262 aa20.14■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Cnot7Q60809 285 aa20.14■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Six1Q62231 284 aa20.14■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Ppp1r13bQ62415 1087 aa20.14■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Zcchc2Q69ZB8 1166 aa20.14■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 Xlr3bQ6P205 226 aa20.14■□□□□ 0.82
Shkbp1-201ENSMUST00000003857 D630039A03RikQ8K0M7 236 aa20.14■□□□□ 0.82
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms