RNA–Protein interactions for RNA: snR54

snR54, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR54, Length 86 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR54snR54 YGP1P38616 354 aaKnown RBP1.42□□□□□ -2.18
snR54snR54 YNL040WP53960 456 aaPredicted RBP1.42□□□□□ -2.18
snR54snR54 ADH5P38113 351 aaKnown RBP1.41□□□□□ -2.18
snR54snR54 MMS21P38632 267 aa1.41□□□□□ -2.18
snR54snR54 YHR122WP38829 231 aa1.41□□□□□ -2.18
snR54snR54 PET8P38921 284 aa1.41□□□□□ -2.18
snR54snR54 YER188WP40103 239 aa1.41□□□□□ -2.18
snR54snR54 HCH1P53834 153 aa1.41□□□□□ -2.18
snR54snR54 MRX4Q12467 430 aa1.41□□□□□ -2.18
snR54snR54 PRE7P23724 241 aaKnown RBP1.4□□□□□ -2.19
snR54snR54 MYO3P36006 1272 aa1.4□□□□□ -2.19
snR54snR54 PEX32P38292 413 aa1.4□□□□□ -2.19
snR54snR54 CTM1P38818 585 aa1.4□□□□□ -2.19
snR54snR54 PCL7P40186 285 aa1.4□□□□□ -2.19
snR54snR54 ERP3Q12403 225 aa1.4□□□□□ -2.19
snR54snR54 CBP2P03874 630 aaPredicted RBP1.39□□□□□ -2.19
snR54snR54 SAG1P20840 650 aa1.39□□□□□ -2.19
snR54snR54 HXT2P23585 541 aa1.39□□□□□ -2.19
snR54snR54 RSA4P25382 515 aaKnown RBP1.39□□□□□ -2.19
snR54snR54 RDS1P25611 832 aa1.39□□□□□ -2.19
snR54snR54 PUP2P32379 260 aa1.39□□□□□ -2.19
snR54snR54 PEX30Q06169 523 aa1.39□□□□□ -2.19
snR54snR54 MRX9Q07349 420 aaKnown RBP1.39□□□□□ -2.19
snR54snR54 STE3P06783 470 aa1.38□□□□□ -2.19
snR54snR54 YLL053CP0CD98 152 aa1.38□□□□□ -2.19
snR54snR54 DCC1P25559 380 aa1.38□□□□□ -2.19
snR54snR54 SUR1P33300 382 aa1.38□□□□□ -2.19
snR54snR54 CSE1P33307 960 aa1.38□□□□□ -2.19
snR54snR54 GDT1P38301 280 aaPredicted RBP1.38□□□□□ -2.19
snR54snR54 EDC2P40023 145 aaPredicted RBP1.38□□□□□ -2.19
snR54snR54 YMR134WP40207 237 aa1.38□□□□□ -2.19
snR54snR54 UFD1P53044 361 aa1.38□□□□□ -2.19
snR54snR54 YNR066CP53752 436 aa1.38□□□□□ -2.19
snR54snR54 PRM4Q12498 284 aa1.38□□□□□ -2.19
snR54snR54 SPO24Q3E752 67 aa1.38□□□□□ -2.19
snR54snR54 BUD2P33314 1104 aa1.37□□□□□ -2.19
snR54snR54 FYV8P46949 817 aaKnown RBP1.37□□□□□ -2.19
snR54snR54 MNN5P46982 586 aa1.37□□□□□ -2.19
snR54snR54 RPA34P47006 233 aaPredicted RBP1.37□□□□□ -2.19
snR54snR54 YNL143CP53908 130 aa1.37□□□□□ -2.19
snR54snR54 YNL095CP53932 642 aa1.37□□□□□ -2.19
snR54snR54 RDL2Q08742 149 aaKnown RBP1.37□□□□□ -2.19
snR54snR54 HSP82P02829 709 aaKnown RBP1.36□□□□□ -2.19
snR54snR54 YAK1P14680 807 aa1.36□□□□□ -2.19
snR54snR54 MEI5P32489 222 aa1.36□□□□□ -2.19
snR54snR54 RXT2P38255 430 aa1.36□□□□□ -2.19
snR54snR54 ALP1P38971 573 aa1.36□□□□□ -2.19
snR54snR54 JEM1P40358 645 aa1.36□□□□□ -2.19
snR54snR54 YIL089WP40500 205 aa1.36□□□□□ -2.19
snR54snR54 SYF2P53277 215 aaPredicted RBP1.36□□□□□ -2.19
snR54snR54 PXR1P53335 271 aaPredicted RBP1.36□□□□□ -2.19
snR54snR54 YPL245WQ12179 454 aaKnown RBP1.36□□□□□ -2.19
snR54snR54 FRE6Q12473 712 aa1.36□□□□□ -2.19
snR54snR54 RGS2Q99188 309 aa1.36□□□□□ -2.19
snR54snR54 DAD2P36162 133 aa1.35□□□□□ -2.19
snR54snR54 PRP39P39682 629 aaKnown RBP1.35□□□□□ -2.19
snR54snR54 BTT1P40314 149 aaPredicted RBP1.35□□□□□ -2.19
snR54snR54 SEC13Q04491 297 aaKnown RBP1.35□□□□□ -2.19
snR54snR54 YOR292CQ08743 309 aa1.35□□□□□ -2.19
snR54snR54 YOL163WP0CF20 169 aa1.34□□□□□ -2.19
snR54snR54 SSU72P53538 206 aaPredicted RBP1.34□□□□□ -2.19
snR54snR54 DTD1Q07648 150 aaKnown RBP1.34□□□□□ -2.19
snR54snR54 YAL063C-AQ3E791 96 aa1.34□□□□□ -2.19
snR54snR54 RBK1P25332 333 aa1.33□□□□□ -2.2
snR54snR54 GPX1P36014 167 aa1.33□□□□□ -2.2
snR54snR54 NBP1P52919 319 aaPredicted RBP1.33□□□□□ -2.2
snR54snR54 TAF6P53040 516 aa1.33□□□□□ -2.2
snR54snR54 EOS1P53938 366 aa1.33□□□□□ -2.2
snR54snR54 OSH6Q02201 448 aa1.33□□□□□ -2.2
snR54snR54 YLR012CQ07927 99 aa1.33□□□□□ -2.2
snR54snR54 ERP4Q12450 207 aa1.33□□□□□ -2.2
snR54snR54 SKS1Q12505 502 aa1.33□□□□□ -2.2
snR54snR54 ERD1P16151 362 aa1.32□□□□□ -2.2
snR54snR54 YCR025CP25352 136 aa1.32□□□□□ -2.2
snR54snR54 YBR062CP38239 180 aa1.32□□□□□ -2.2
snR54snR54 PIR5P46999 287 aa1.32□□□□□ -2.2
snR54snR54 AQR1P53943 586 aa1.32□□□□□ -2.2
snR54snR54 VIK1Q12045 647 aa1.32□□□□□ -2.2
snR54snR54 TIM22Q12328 207 aa1.32□□□□□ -2.2
snR54snR54 AIM29P36154 155 aa1.31□□□□□ -2.2
snR54snR54 YIL012WP40551 113 aa1.31□□□□□ -2.2
snR54snR54 YNL146WP53906 100 aa1.31□□□□□ -2.2
snR54snR54 BUR2Q05949 395 aa1.31□□□□□ -2.2
snR54snR54 DBP9Q06218 594 aaKnown RBP1.31□□□□□ -2.2
snR54snR54 RDS3Q06835 107 aaPredicted RBP1.31□□□□□ -2.2
snR54snR54 VPH2P32341 215 aa1.3□□□□□ -2.2
snR54snR54 CAB3P36076 571 aa1.3□□□□□ -2.2
snR54snR54 YHL044WP38727 235 aa1.3□□□□□ -2.2
snR54snR54 SOP4P39543 234 aaPredicted RBP1.3□□□□□ -2.2
snR54snR54 YFL040WP43562 540 aa1.3□□□□□ -2.2
snR54snR54 MIG2P53035 382 aa1.3□□□□□ -2.2
snR54snR54 YGL114WP53134 725 aa1.3□□□□□ -2.2
snR54snR54 RVB1Q03940 463 aaKnown RBP1.3□□□□□ -2.2
snR54snR54 UBX2Q04228 584 aa1.3□□□□□ -2.2
snR54snR54 ARC18Q05933 178 aaKnown RBP1.3□□□□□ -2.2
snR54snR54 PLB3Q08108 686 aa1.3□□□□□ -2.2
snR54snR54 YPL278CQ08990 100 aa1.3□□□□□ -2.2
snR54snR54 PRR2Q12310 699 aa1.3□□□□□ -2.2
snR54snR54 VPS1P21576 704 aaKnown RBP1.29□□□□□ -2.2
snR54snR54 MRPL6P32904 214 aa1.29□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 222.4 ms