RNA–Protein interactions for RNA: snR13

snR13, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR13, Length 124 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR13snR13 NBL1Q3E7Y6 73 aa1.5□□□□□ -2.17
snR13snR13 REP1P03871 373 aa1.49□□□□□ -2.17
snR13snR13 RBK1P25332 333 aa1.49□□□□□ -2.17
snR13snR13 MEI5P32489 222 aa1.49□□□□□ -2.17
snR13snR13 MED8P38304 223 aa1.49□□□□□ -2.17
snR13snR13 ASP1P38986 381 aaPredicted RBP1.49□□□□□ -2.17
snR13snR13 SMC2P38989 1170 aaKnown RBP1.49□□□□□ -2.17
snR13snR13 SCC4P40090 624 aa1.49□□□□□ -2.17
snR13snR13 BTT1P40314 149 aaPredicted RBP1.49□□□□□ -2.17
snR13snR13 ECO1P43605 281 aa1.49□□□□□ -2.17
snR13snR13 HSH155P49955 971 aaKnown RBP1.49□□□□□ -2.17
snR13snR13 YNL146WP53906 100 aa1.49□□□□□ -2.17
snR13snR13 RCF1Q03713 159 aa1.49□□□□□ -2.17
snR13snR13 DTD1Q07648 150 aaKnown RBP1.49□□□□□ -2.17
snR13snR13 PRM4Q12498 284 aa1.49□□□□□ -2.17
snR13snR13 ARO4P32449 370 aaKnown RBP1.48□□□□□ -2.17
snR13snR13 CSE1P33307 960 aa1.48□□□□□ -2.17
snR13snR13 CUE3P53137 624 aaKnown RBP1.48□□□□□ -2.17
snR13snR13 PXR1P53335 271 aaPredicted RBP1.48□□□□□ -2.17
snR13snR13 YPL080CQ02826 108 aa1.48□□□□□ -2.17
snR13snR13 MIX17Q03667 156 aa1.48□□□□□ -2.17
snR13snR13 DBP9Q06218 594 aaKnown RBP1.48□□□□□ -2.17
snR13snR13 DXO1Q06349 442 aa1.48□□□□□ -2.17
snR13snR13 RDL2Q08742 149 aaKnown RBP1.48□□□□□ -2.17
snR13snR13 YPL245WQ12179 454 aaKnown RBP1.48□□□□□ -2.17
snR13snR13 CBP2P03874 630 aaPredicted RBP1.47□□□□□ -2.17
snR13snR13 MET2P08465 486 aa1.47□□□□□ -2.17
snR13snR13 BUD2P33314 1104 aa1.47□□□□□ -2.17
snR13snR13 YKR032WP36127 104 aa1.47□□□□□ -2.17
snR13snR13 LAS1P36146 502 aaPredicted RBP1.47□□□□□ -2.17
snR13snR13 YFR045WP43617 309 aa1.47□□□□□ -2.17
snR13snR13 TAF6P53040 516 aa1.47□□□□□ -2.17
snR13snR13 YGL114WP53134 725 aa1.47□□□□□ -2.17
snR13snR13 YNL040WP53960 456 aaPredicted RBP1.47□□□□□ -2.17
snR13snR13 BUR2Q05949 395 aa1.47□□□□□ -2.17
snR13snR13 IES3Q12345 250 aa1.47□□□□□ -2.17
snR13snR13 ERP3Q12403 225 aa1.47□□□□□ -2.17
snR13snR13 TAL1P15019 335 aaKnown RBP1.46□□□□□ -2.18
snR13snR13 SUR1P33300 382 aa1.46□□□□□ -2.18
snR13snR13 PET8P38921 284 aa1.46□□□□□ -2.18
snR13snR13 EDC2P40023 145 aaPredicted RBP1.46□□□□□ -2.18
snR13snR13 FYV8P46949 817 aaKnown RBP1.46□□□□□ -2.18
snR13snR13 RVB1Q03940 463 aaKnown RBP1.46□□□□□ -2.18
snR13snR13 CLP1Q08685 445 aaPredicted RBP1.46□□□□□ -2.18
snR13snR13 NFI1Q12216 726 aa1.46□□□□□ -2.18
snR13snR13 TDH2P00358 332 aaKnown RBP1.45□□□□□ -2.18
snR13snR13 TDH3P00359 332 aaKnown RBP RIP-Chip data1.45□□□□□ -2.18not detected
snR13snR13 ERD1P16151 362 aa1.45□□□□□ -2.18
snR13snR13 KRE1P17260 313 aa1.45□□□□□ -2.18
snR13snR13 CDC42P19073 191 aa1.45□□□□□ -2.18
snR13snR13 VMA5P31412 392 aaKnown RBP1.45□□□□□ -2.18
snR13snR13 SIF2P38262 535 aa1.45□□□□□ -2.18
snR13snR13 YIL089WP40500 205 aa1.45□□□□□ -2.18
snR13snR13 YNR066CP53752 436 aa1.45□□□□□ -2.18
snR13snR13 ACT1P60010 375 aaKnown RBP1.45□□□□□ -2.18
snR13snR13 RGM1Q00453 211 aa1.45□□□□□ -2.18
snR13snR13 SEC13Q04491 297 aaKnown RBP1.45□□□□□ -2.18
snR13snR13 YLR012CQ07927 99 aa1.45□□□□□ -2.18
snR13snR13 VIK1Q12045 647 aa1.45□□□□□ -2.18
snR13snR13 MRX4Q12467 430 aa1.45□□□□□ -2.18
snR13snR13 POT1P27796 417 aaKnown RBP RIP-Chip data1.44□□□□□ -2.18not detected
snR13snR13 ACB1P31787 87 aa1.44□□□□□ -2.18
snR13snR13 YGR016WP53209 190 aa1.44□□□□□ -2.18
snR13snR13 PDR16P53860 351 aaKnown RBP1.44□□□□□ -2.18
snR13snR13 CDD1Q06549 142 aa1.44□□□□□ -2.18
snR13snR13 PML1Q07930 204 aaPredicted RBP1.44□□□□□ -2.18
snR13snR13 FEX1Q08913 375 aa1.44□□□□□ -2.18
snR13snR13 FEX2Q08991 375 aa1.44□□□□□ -2.18
snR13snR13 YDR262WQ12331 272 aa1.44□□□□□ -2.18
snR13snR13 PRE7P23724 241 aaKnown RBP1.43□□□□□ -2.18
snR13snR13 YER084WP40057 128 aa1.43□□□□□ -2.18
snR13snR13 UFD1P53044 361 aa1.43□□□□□ -2.18
snR13snR13 YGR168CP53293 376 aa1.43□□□□□ -2.18
snR13snR13 UBX2Q04228 584 aa1.43□□□□□ -2.18
snR13snR13 YOR292CQ08743 309 aa1.43□□□□□ -2.18
snR13snR13 RNR2P09938 399 aaKnown RBP1.42□□□□□ -2.18
snR13snR13 YOL163WP0CF20 169 aa1.42□□□□□ -2.18
snR13snR13 YAK1P14680 807 aa1.42□□□□□ -2.18
snR13snR13 RSA4P25382 515 aaKnown RBP1.42□□□□□ -2.18
snR13snR13 VPH2P32341 215 aa1.42□□□□□ -2.18
snR13snR13 AIM29P36154 155 aa1.42□□□□□ -2.18
snR13snR13 SOP4P39543 234 aaPredicted RBP1.42□□□□□ -2.18
snR13snR13 IRC4Q03036 179 aa1.42□□□□□ -2.18
snR13snR13 ARC18Q05933 178 aaKnown RBP1.42□□□□□ -2.18
snR13snR13 PEX30Q06169 523 aa1.42□□□□□ -2.18
snR13snR13 LAG2Q92325 660 aa1.42□□□□□ -2.18
snR13snR13 VPS1P21576 704 aaKnown RBP1.41□□□□□ -2.18
snR13snR13 YEL043WP32618 956 aa1.41□□□□□ -2.18
snR13snR13 MRPL6P32904 214 aa1.41□□□□□ -2.18
snR13snR13 GPX1P36014 167 aa1.41□□□□□ -2.18
snR13snR13 YBL081WP38180 368 aaKnown RBP1.41□□□□□ -2.18
snR13snR13 ATG12P38316 186 aa1.41□□□□□ -2.18
snR13snR13 LIN1P38852 340 aaPredicted RBP1.41□□□□□ -2.18
snR13snR13 PES4P39684 611 aa1.41□□□□□ -2.18
snR13snR13 YFL040WP43562 540 aa1.41□□□□□ -2.18
snR13snR13 SYF2P53277 215 aaPredicted RBP1.41□□□□□ -2.18
snR13snR13 SNF6P18888 332 aa1.4□□□□□ -2.19
snR13snR13 ZRT1P32804 376 aa1.4□□□□□ -2.19
snR13snR13 YGP1P38616 354 aaKnown RBP1.4□□□□□ -2.19
snR13snR13 YHR035WP38769 630 aa1.4□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 41.8 ms