RNA–Protein interactions for RNA: YPR066W

UBA3, Transcript of Protein that activates Rub1p (NEDD8) before neddylation, yeast

Gene UBA3, Length 900 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBA3	YPR066W	TAL1	P15019	335 aa	Known RBP	4.61	□□□□□ -1.67
UBA3	YPR066W	PRP16	P15938	1071 aa	Predicted RBP	4.61	□□□□□ -1.67
UBA3	YPR066W	URA10	P30402	227 aa		4.61	□□□□□ -1.67
UBA3	YPR066W	PRP18	P33411	251 aa	Predicted RBP	4.61	□□□□□ -1.67
UBA3	YPR066W	LOS1	P33418	1100 aa	Predicted RBP	4.61	□□□□□ -1.67
UBA3	YPR066W	CCT4	P39078	528 aa	Known RBP	4.61	□□□□□ -1.67
UBA3	YPR066W	MST28	P39552	234 aa		4.61	□□□□□ -1.67
UBA3	YPR066W	DSN1	P40568	576 aa		4.61	□□□□□ -1.67
UBA3	YPR066W	RPA34	P47006	233 aa	Predicted RBP	4.61	□□□□□ -1.67
UBA3	YPR066W	PRO2	P54885	456 aa	Known RBP	4.61	□□□□□ -1.67
UBA3	YPR066W	SLT2	Q00772	484 aa		4.61	□□□□□ -1.67
UBA3	YPR066W	OSH6	Q02201	448 aa		4.61	□□□□□ -1.67
UBA3	YPR066W	MRP51	Q02950	344 aa		4.61	□□□□□ -1.67
UBA3	YPR066W	MMT1	Q03218	510 aa		4.61	□□□□□ -1.67
UBA3	YPR066W	URC2	Q04411	772 aa		4.61	□□□□□ -1.67
UBA3	YPR066W	CDC123	Q05791	360 aa		4.61	□□□□□ -1.67
UBA3	YPR066W	RRP9	Q06506	573 aa	Known RBP	4.61	□□□□□ -1.67
UBA3	YPR066W	NOP6	Q07623	225 aa	Known RBP	4.61	□□□□□ -1.67
UBA3	YPR066W	MUM3	Q08750	479 aa		4.61	□□□□□ -1.67
UBA3	YPR066W	STT4	P37297	1900 aa		4.61	□□□□□ -1.67
UBA3	YPR066W	BRR2	P32639	2163 aa	Known RBP	4.61	□□□□□ -1.67
UBA3	YPR066W	HEM2	P05373	342 aa		4.6	□□□□□ -1.67
UBA3	YPR066W	STE3	P06783	470 aa		4.6	□□□□□ -1.67
UBA3	YPR066W	RPL12A	P0CX53	165 aa	Known RBP	4.6	□□□□□ -1.67
UBA3	YPR066W	RPL12B	P0CX54	165 aa		4.6	□□□□□ -1.67
UBA3	YPR066W	RNA14	P25298	677 aa	Known RBP	4.6	□□□□□ -1.67
UBA3	YPR066W	MAL13	P53338	473 aa		4.6	□□□□□ -1.67
UBA3	YPR066W	MPS1	P54199	764 aa		4.6	□□□□□ -1.67
UBA3	YPR066W	SPP2	Q02521	185 aa		4.6	□□□□□ -1.67
UBA3	YPR066W	PET117	Q02771	107 aa		4.6	□□□□□ -1.67
UBA3	YPR066W	YMR027W	Q04371	470 aa		4.6	□□□□□ -1.67
UBA3	YPR066W	YET3	Q07451	203 aa		4.6	□□□□□ -1.67
UBA3	YPR066W	ICT1	Q12385	394 aa		4.6	□□□□□ -1.67
UBA3	YPR066W	ATR1	P13090	542 aa		4.59	□□□□□ -1.67
UBA3	YPR066W	PUT3	P25502	979 aa	Predicted RBP	4.59	□□□□□ -1.67
UBA3	YPR066W	SKN1	P33336	771 aa		4.59	□□□□□ -1.67
UBA3	YPR066W	TIP20	P33891	701 aa		4.59	□□□□□ -1.67
UBA3	YPR066W	CAB3	P36076	571 aa		4.59	□□□□□ -1.67
UBA3	YPR066W	ETR1	P38071	380 aa		4.59	□□□□□ -1.67
UBA3	YPR066W	SMX2	P40204	77 aa	Known RBP	4.59	□□□□□ -1.67
UBA3	YPR066W	SIM1	P40472	476 aa		4.59	□□□□□ -1.67
UBA3	YPR066W	SPG5	P42933	373 aa		4.59	□□□□□ -1.67
UBA3	YPR066W	MIC19	P43594	170 aa		4.59	□□□□□ -1.67
UBA3	YPR066W	BIR1	P47134	954 aa		4.59	□□□□□ -1.67
UBA3	YPR066W	YPL199C	Q08954	240 aa		4.59	□□□□□ -1.67
UBA3	YPR066W	YPL247C	Q12523	523 aa		4.59	□□□□□ -1.67
UBA3	YPR066W	CPA1	P07258	411 aa	Known RBP	4.58	□□□□□ -1.68
UBA3	YPR066W	SAG1	P20840	650 aa		4.58	□□□□□ -1.68
UBA3	YPR066W	CWP1	P28319	239 aa		4.58	□□□□□ -1.68
UBA3	YPR066W	MGM101	P32787	269 aa	Known RBP	4.58	□□□□□ -1.68
UBA3	YPR066W	PTM1	P32857	523 aa		4.58	□□□□□ -1.68
UBA3	YPR066W	CYM1	P32898	989 aa		4.58	□□□□□ -1.68
UBA3	YPR066W	FMP46	P36141	133 aa	Known RBP	4.58	□□□□□ -1.68
UBA3	YPR066W	RRF1	P38771	230 aa		4.58	□□□□□ -1.68
UBA3	YPR066W	SSN8	P47821	323 aa		4.58	□□□□□ -1.68
UBA3	YPR066W	TOS2	P50078	622 aa		4.58	□□□□□ -1.68
UBA3	YPR066W	COS10	P52924	374 aa		4.58	□□□□□ -1.68
UBA3	YPR066W	MPS2	P53159	387 aa		4.58	□□□□□ -1.68
UBA3	YPR066W	GOT1	Q03554	138 aa		4.58	□□□□□ -1.68
UBA3	YPR066W	YMR209C	Q03648	457 aa		4.58	□□□□□ -1.68
UBA3	YPR066W	RIO1	Q12196	484 aa	Known RBP	4.58	□□□□□ -1.68
UBA3	YPR066W	YOR012W	Q12351	137 aa		4.58	□□□□□ -1.68
UBA3	YPR066W	SET6	Q12529	373 aa		4.58	□□□□□ -1.68
UBA3	YPR066W	POL30	P15873	258 aa	Known RBP	4.57	□□□□□ -1.68
UBA3	YPR066W	CDC13	P32797	924 aa	Known RBP	4.57	□□□□□ -1.68
UBA3	YPR066W	SUR1	P33300	382 aa		4.57	□□□□□ -1.68
UBA3	YPR066W	YBR137W	P38276	179 aa		4.57	□□□□□ -1.68
UBA3	YPR066W	YHR182W	P38870	785 aa		4.57	□□□□□ -1.68
UBA3	YPR066W	UTP18	P40362	594 aa	Predicted RBP	4.57	□□□□□ -1.68
UBA3	YPR066W	INA22	P40576	216 aa		4.57	□□□□□ -1.68
UBA3	YPR066W	STE24	P47154	453 aa		4.57	□□□□□ -1.68
UBA3	YPR066W	CAF40	P53829	373 aa		4.57	□□□□□ -1.68
UBA3	YPR066W	RHO3	Q00245	231 aa	Known RBP	4.57	□□□□□ -1.68
UBA3	YPR066W	PRP3	Q03338	469 aa	Predicted RBP	4.57	□□□□□ -1.68
UBA3	YPR066W	MGR3	Q04472	501 aa		4.57	□□□□□ -1.68
UBA3	YPR066W	RPO26	P20435	155 aa		4.56	□□□□□ -1.68
UBA3	YPR066W	DAL82	P21705	255 aa		4.56	□□□□□ -1.68
UBA3	YPR066W	SLM5	P25345	492 aa	Known RBP	4.56	□□□□□ -1.68
UBA3	YPR066W	UBC6	P33296	250 aa	Predicted RBP	4.56	□□□□□ -1.68
UBA3	YPR066W	SEC27	P41811	889 aa	Known RBP	4.56	□□□□□ -1.68
UBA3	YPR066W	BOL2	P53082	120 aa		4.56	□□□□□ -1.68
UBA3	YPR066W	BIO4	P53630	237 aa		4.56	□□□□□ -1.68
UBA3	YPR066W	ZRG17	P53735	605 aa		4.56	□□□□□ -1.68
UBA3	YPR066W	HXT11	P54862	567 aa		4.56	□□□□□ -1.68
UBA3	YPR066W	CSN9	Q03981	162 aa		4.56	□□□□□ -1.68
UBA3	YPR066W	BSC6	Q08280	497 aa		4.56	□□□□□ -1.68
UBA3	YPR066W	GTT2	Q12390	233 aa		4.56	□□□□□ -1.68
UBA3	YPR066W	GPA2	P10823	449 aa		4.55	□□□□□ -1.68
UBA3	YPR066W	MCK1	P21965	375 aa	Known RBP	4.55	□□□□□ -1.68
UBA3	YPR066W	MEI5	P32489	222 aa		4.55	□□□□□ -1.68
UBA3	YPR066W	TOA2	P32774	122 aa		4.55	□□□□□ -1.68
UBA3	YPR066W	KKQ8	P36004	724 aa		4.55	□□□□□ -1.68
UBA3	YPR066W	RIB5	P38145	238 aa		4.55	□□□□□ -1.68
UBA3	YPR066W	MIX23	P38162	196 aa		4.55	□□□□□ -1.68
UBA3	YPR066W	EFM1	P38732	585 aa		4.55	□□□□□ -1.68
UBA3	YPR066W	FAA2	P39518	744 aa		4.55	□□□□□ -1.68
UBA3	YPR066W	OST1	P41543	476 aa	Known RBP	4.55	□□□□□ -1.68
UBA3	YPR066W	GPI8	P49018	411 aa		4.55	□□□□□ -1.68
UBA3	YPR066W	LSC1	P53598	329 aa	Known RBP	4.55	□□□□□ -1.68
UBA3	YPR066W	WSC2	P53832	503 aa		4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms