RNA–Protein interactions for RNA: YOL117W

RRI2, Transcript of Subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI2, Length 1,938 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI2YOL117W PRP46Q12417 451 aaPredicted RBP1.95□□□□□ -2.1
RRI2YOL117W RNR2P09938 399 aaKnown RBP1.95□□□□□ -2.1
RRI2YOL117W GAL3P13045 520 aa1.95□□□□□ -2.1
RRI2YOL117W SPS100P13130 326 aa1.95□□□□□ -2.1
RRI2YOL117W VMA5P31412 392 aaKnown RBP1.95□□□□□ -2.1
RRI2YOL117W ACB1P31787 87 aa1.95□□□□□ -2.1
RRI2YOL117W SMI1P32566 505 aa1.95□□□□□ -2.1
RRI2YOL117W CAJ1P39101 391 aa1.95□□□□□ -2.1
RRI2YOL117W RVB1Q03940 463 aaKnown RBP1.95□□□□□ -2.1
RRI2YOL117W YPL264CQ08980 353 aa1.95□□□□□ -2.1
RRI2YOL117W TRM10Q12400 293 aa1.95□□□□□ -2.1
RRI2YOL117W RPS23AP0CX29 145 aaKnown RBP1.94□□□□□ -2.1
RRI2YOL117W RPS23BP0CX30 145 aa1.94□□□□□ -2.1
RRI2YOL117W RPL18AP0CX49 186 aaKnown RBP1.94□□□□□ -2.1
RRI2YOL117W RPL18BP0CX50 186 aaKnown RBP1.94□□□□□ -2.1
RRI2YOL117W RBK1P25332 333 aa1.94□□□□□ -2.1
RRI2YOL117W PRO2P54885 456 aaKnown RBP1.94□□□□□ -2.1
RRI2YOL117W GTO3Q04806 366 aa1.94□□□□□ -2.1
RRI2YOL117W SLM1P40485 686 aa1.93□□□□□ -2.1
RRI2YOL117W INA22P40576 216 aa1.93□□□□□ -2.1
RRI2YOL117W YNR066CP53752 436 aa1.93□□□□□ -2.1
RRI2YOL117W DTD1Q07648 150 aaKnown RBP1.93□□□□□ -2.1
RRI2YOL117W MSS116P15424 664 aaKnown RBP1.93□□□□□ -2.1
RRI2YOL117W MEI5P32489 222 aa1.93□□□□□ -2.1
RRI2YOL117W YIL059CP40520 121 aa1.93□□□□□ -2.1
RRI2YOL117W HRT1Q08273 121 aa1.93□□□□□ -2.1
RRI2YOL117W ITR2P30606 609 aa1.92□□□□□ -2.1
RRI2YOL117W ARO4P32449 370 aaKnown RBP1.92□□□□□ -2.1
RRI2YOL117W YKL162CP36052 402 aa1.92□□□□□ -2.1
RRI2YOL117W SOP4P39543 234 aaPredicted RBP1.92□□□□□ -2.1
RRI2YOL117W VPS20Q04272 221 aa1.92□□□□□ -2.1
RRI2YOL117W YDR222WQ04925 415 aa1.92□□□□□ -2.1
RRI2YOL117W YPL245WQ12179 454 aaKnown RBP1.92□□□□□ -2.1
RRI2YOL117W DAL5P15365 543 aa1.91□□□□□ -2.1
RRI2YOL117W HPR1P17629 752 aaKnown RBP1.91□□□□□ -2.1
RRI2YOL117W YPS1P32329 569 aa1.91□□□□□ -2.1
RRI2YOL117W YIL054WP40524 105 aa1.91□□□□□ -2.1
RRI2YOL117W HIT1P46973 164 aa1.91□□□□□ -2.1
RRI2YOL117W YJL144WP47009 104 aa1.91□□□□□ -2.1
RRI2YOL117W DIA1P54005 336 aa1.91□□□□□ -2.1
RRI2YOL117W ERP3Q12403 225 aa1.91□□□□□ -2.1
RRI2YOL117W SPT7P35177 1332 aa1.91□□□□□ -2.1
RRI2YOL117W INO2P26798 304 aa1.91□□□□□ -2.1
RRI2YOL117W SDH4P37298 181 aa1.91□□□□□ -2.1
RRI2YOL117W ECM14P38836 430 aa1.91□□□□□ -2.1
RRI2YOL117W ASP1P38986 381 aaPredicted RBP1.91□□□□□ -2.1
RRI2YOL117W SMC2P38989 1170 aaKnown RBP1.91□□□□□ -2.1
RRI2YOL117W UTP25P40498 721 aaKnown RBP1.91□□□□□ -2.1
RRI2YOL117W YFR045WP43617 309 aa1.91□□□□□ -2.1
RRI2YOL117W YGL118CP53132 145 aa1.91□□□□□ -2.1
RRI2YOL117W CAX4P53223 239 aa1.91□□□□□ -2.1
RRI2YOL117W YGR168CP53293 376 aa1.91□□□□□ -2.1
RRI2YOL117W OKP1P53298 406 aa1.91□□□□□ -2.1
RRI2YOL117W BUR2Q05949 395 aa1.91□□□□□ -2.1
RRI2YOL117W YOR292CQ08743 309 aa1.91□□□□□ -2.1
RRI2YOL117W SGT2Q12118 346 aaKnown RBP1.91□□□□□ -2.1
RRI2YOL117W PAA1Q12447 191 aaKnown RBP1.91□□□□□ -2.1
RRI2YOL117W VMA2P16140 517 aaKnown RBP1.9□□□□□ -2.11
RRI2YOL117W MRPL20P22354 195 aaPredicted RBP1.9□□□□□ -2.11
RRI2YOL117W MCH2P36032 473 aa1.9□□□□□ -2.11
RRI2YOL117W CTM1P38818 585 aa1.9□□□□□ -2.11
RRI2YOL117W AIM20P40451 204 aa1.9□□□□□ -2.11
RRI2YOL117W ASG7P46993 209 aa1.9□□□□□ -2.11
RRI2YOL117W IRC4Q03036 179 aa1.9□□□□□ -2.11
RRI2YOL117W MGR3Q04472 501 aa1.9□□□□□ -2.11
RRI2YOL117W TFC7Q12415 435 aa1.9□□□□□ -2.11
RRI2YOL117W DAL81P21657 970 aa1.89□□□□□ -2.11
RRI2YOL117W VPH2P32341 215 aa1.89□□□□□ -2.11
RRI2YOL117W GPX1P36014 167 aa1.89□□□□□ -2.11
RRI2YOL117W YHR035WP38769 630 aa1.89□□□□□ -2.11
RRI2YOL117W CDC40P40968 455 aaPredicted RBP1.89□□□□□ -2.11
RRI2YOL117W SNX41Q04053 625 aa1.89□□□□□ -2.11
RRI2YOL117W CDC37P06101 506 aaKnown RBP1.89□□□□□ -2.11
RRI2YOL117W OPI1P21957 404 aa1.89□□□□□ -2.11
RRI2YOL117W YBR062CP38239 180 aa1.89□□□□□ -2.11
RRI2YOL117W UFD1P53044 361 aa1.89□□□□□ -2.11
RRI2YOL117W YLR446WQ06204 433 aa1.89□□□□□ -2.11
RRI2YOL117W DXO1Q06349 442 aa1.89□□□□□ -2.11
RRI2YOL117W CBP2P03874 630 aaPredicted RBP1.88□□□□□ -2.11
RRI2YOL117W CDC42P19073 191 aa1.88□□□□□ -2.11
RRI2YOL117W SUR1P33300 382 aa1.88□□□□□ -2.11
RRI2YOL117W SWC5P38326 303 aa1.88□□□□□ -2.11
RRI2YOL117W YPL080CQ02826 108 aa1.88□□□□□ -2.11
RRI2YOL117W CAB5Q03941 241 aa1.88□□□□□ -2.11
RRI2YOL117W SEC13Q04491 297 aaKnown RBP1.88□□□□□ -2.11
RRI2YOL117W YAL063C-AQ3E791 96 aa1.88□□□□□ -2.11
RRI2YOL117W ERD1P16151 362 aa1.87□□□□□ -2.11
RRI2YOL117W PET18P25362 215 aa1.87□□□□□ -2.11
RRI2YOL117W TKL2P33315 681 aa1.87□□□□□ -2.11
RRI2YOL117W MED8P38304 223 aa1.87□□□□□ -2.11
RRI2YOL117W FET3P38993 636 aa1.87□□□□□ -2.11
RRI2YOL117W SSO2P39926 295 aa1.87□□□□□ -2.11
RRI2YOL117W HSH155P49955 971 aaKnown RBP1.87□□□□□ -2.11
RRI2YOL117W YNL040WP53960 456 aaPredicted RBP1.87□□□□□ -2.11
RRI2YOL117W YPR063CQ12160 140 aa1.87□□□□□ -2.11
RRI2YOL117W TDH2P00358 332 aaKnown RBP1.87□□□□□ -2.11
RRI2YOL117W TDH3P00359 332 aaKnown RBP RIP-Chip data1.87□□□□□ -2.11not detected
RRI2YOL117W PRE7P23724 241 aaKnown RBP1.87□□□□□ -2.11
RRI2YOL117W ALK2P32789 676 aaPredicted RBP1.87□□□□□ -2.11
RRI2YOL117W YPC1P38298 316 aa1.87□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms