RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C ZIM17P42844 174 aa7.93□□□□□ -1.14
RPD3YNL330C HAM1P47119 197 aaKnown RBP7.93□□□□□ -1.14
RPD3YNL330C GNP1P48813 663 aa7.93□□□□□ -1.14
RPD3YNL330C UBC12P52491 188 aa7.93□□□□□ -1.14
RPD3YNL330C MTL1P53214 551 aa7.93□□□□□ -1.14
RPD3YNL330C RNH70P53331 553 aa7.93□□□□□ -1.14
RPD3YNL330C SNO4Q04902 237 aa7.93□□□□□ -1.14
RPD3YNL330C DCR2Q05924 578 aa7.93□□□□□ -1.14
RPD3YNL330C PEX30Q06169 523 aa7.93□□□□□ -1.14
RPD3YNL330C HSP33Q08914 237 aaKnown RBP7.93□□□□□ -1.14
RPD3YNL330C MMT2Q08970 484 aa7.93□□□□□ -1.14
RPD3YNL330C FEX2Q08991 375 aa7.93□□□□□ -1.14
RPD3YNL330C HSP32Q08992 237 aa7.93□□□□□ -1.14
RPD3YNL330C ATP16Q12165 160 aa7.93□□□□□ -1.14
RPD3YNL330C RDI1Q12434 202 aa7.93□□□□□ -1.14
RPD3YNL330C CET1O13297 549 aaPredicted RBP7.92□□□□□ -1.14
RPD3YNL330C YBR085C-AO43137 85 aa7.92□□□□□ -1.14
RPD3YNL330C HAP4P14064 554 aa7.92□□□□□ -1.14
RPD3YNL330C YCL002CP25565 263 aa7.92□□□□□ -1.14
RPD3YNL330C ATS1P31386 333 aa7.92□□□□□ -1.14
RPD3YNL330C YMC1P32331 307 aa7.92□□□□□ -1.14
RPD3YNL330C WBP1P33767 430 aaKnown RBP7.92□□□□□ -1.14
RPD3YNL330C SFK1P35735 353 aa7.92□□□□□ -1.14
RPD3YNL330C TRR2P38816 342 aa7.92□□□□□ -1.14
RPD3YNL330C YNL195CP40168 261 aa7.92□□□□□ -1.14
RPD3YNL330C SFH5P47008 294 aa7.92□□□□□ -1.14
RPD3YNL330C COQ5P49017 307 aa7.92□□□□□ -1.14
RPD3YNL330C JAC1P53193 184 aa7.92□□□□□ -1.14
RPD3YNL330C KEI1Q06346 221 aa7.92□□□□□ -1.14
RPD3YNL330C BRX1Q08235 291 aaKnown RBP7.92□□□□□ -1.14
RPD3YNL330C SYC1Q08553 188 aaPredicted RBP7.92□□□□□ -1.14
RPD3YNL330C BTS1Q12051 335 aa7.92□□□□□ -1.14
RPD3YNL330C LEU9Q12166 604 aaKnown RBP7.92□□□□□ -1.14
RPD3YNL330C YOL107WQ12239 342 aa7.92□□□□□ -1.14
RPD3YNL330C INP53Q12271 1107 aa7.92□□□□□ -1.14
RPD3YNL330C SOD2P00447 233 aa7.91□□□□□ -1.14
RPD3YNL330C RPS14AP06367 137 aaKnown RBP7.91□□□□□ -1.14
RPD3YNL330C BAR1P12630 587 aa7.91□□□□□ -1.14
RPD3YNL330C CKS1P20486 150 aaKnown RBP7.91□□□□□ -1.14
RPD3YNL330C YCP4P25349 247 aaKnown RBP7.91□□□□□ -1.14
RPD3YNL330C HCM1P25364 564 aa7.91□□□□□ -1.14
RPD3YNL330C BOS1P25385 244 aa7.91□□□□□ -1.14
RPD3YNL330C CPR3P25719 182 aa7.91□□□□□ -1.14
RPD3YNL330C MAL32P38158 584 aa7.91□□□□□ -1.14
RPD3YNL330C RPS14BP39516 138 aaKnown RBP7.91□□□□□ -1.14
RPD3YNL330C YAL037WP39728 267 aa7.91□□□□□ -1.14
RPD3YNL330C TIR3P40552 269 aa7.91□□□□□ -1.14
RPD3YNL330C CAT5P41735 233 aa7.91□□□□□ -1.14
RPD3YNL330C ECL1P48235 211 aa7.91□□□□□ -1.14
RPD3YNL330C MAL12P53341 584 aa7.91□□□□□ -1.14
RPD3YNL330C SCS7Q03529 384 aa7.91□□□□□ -1.14
RPD3YNL330C SIZ1Q04195 904 aa7.91□□□□□ -1.14
RPD3YNL330C COX20Q04935 205 aa7.91□□□□□ -1.14
RPD3YNL330C YPR127WQ06494 345 aa7.91□□□□□ -1.14
RPD3YNL330C YPR091CQ06833 770 aa7.91□□□□□ -1.14
RPD3YNL330C YDL109CQ12103 647 aa7.91□□□□□ -1.14
RPD3YNL330C ATP14Q12349 124 aa7.91□□□□□ -1.14
RPD3YNL330C FSH3Q99369 266 aa7.91□□□□□ -1.14
RPD3YNL330C GAL4P04386 881 aa7.9□□□□□ -1.14
RPD3YNL330C ARG80P07249 177 aa7.9□□□□□ -1.14
RPD3YNL330C RED1P14291 827 aa7.9□□□□□ -1.14
RPD3YNL330C MAG1P22134 296 aaKnown RBP7.9□□□□□ -1.14
RPD3YNL330C NAM9P27929 486 aa7.9□□□□□ -1.14
RPD3YNL330C CAM1P29547 415 aaKnown RBP7.9□□□□□ -1.14
RPD3YNL330C VMA8P32610 256 aaKnown RBP7.9□□□□□ -1.14
RPD3YNL330C AUR1P36107 401 aaPredicted RBP7.9□□□□□ -1.14
RPD3YNL330C VPS51P36116 164 aa7.9□□□□□ -1.14
RPD3YNL330C FMP46P36141 133 aaKnown RBP7.9□□□□□ -1.14
RPD3YNL330C GEP4P38812 185 aa7.9□□□□□ -1.14
RPD3YNL330C FAA3P39002 694 aa7.9□□□□□ -1.14
RPD3YNL330C PHO90P39535 881 aa7.9□□□□□ -1.14
RPD3YNL330C PRP39P39682 629 aaKnown RBP7.9□□□□□ -1.14
RPD3YNL330C YMR144WP40214 342 aaKnown RBP7.9□□□□□ -1.14
RPD3YNL330C QDR1P40475 563 aa7.9□□□□□ -1.14
RPD3YNL330C SMK1P41808 388 aa7.9□□□□□ -1.14
RPD3YNL330C LOH1P47055 219 aa7.9□□□□□ -1.14
RPD3YNL330C SAY1P53324 424 aa7.9□□□□□ -1.14
RPD3YNL330C VBA1Q04301 562 aa7.9□□□□□ -1.14
RPD3YNL330C RBS1Q05672 457 aaKnown RBP7.9□□□□□ -1.14
RPD3YNL330C TAZ1Q06510 381 aa7.9□□□□□ -1.14
RPD3YNL330C YPR172WQ06608 200 aa7.9□□□□□ -1.14
RPD3YNL330C LUC7Q07508 261 aaPredicted RBP7.9□□□□□ -1.14
RPD3YNL330C CYK3Q07533 885 aa7.9□□□□□ -1.14
RPD3YNL330C YLR031WQ07978 186 aa7.9□□□□□ -1.14
RPD3YNL330C SRO7Q12038 1033 aa7.9□□□□□ -1.14
RPD3YNL330C AEP3Q12089 606 aa7.9□□□□□ -1.14
RPD3YNL330C RTC5Q12108 567 aaKnown RBP7.9□□□□□ -1.14
RPD3YNL330C AHC1Q12433 566 aa7.9□□□□□ -1.14
RPD3YNL330C HIS5P07172 385 aa7.89□□□□□ -1.15
RPD3YNL330C GCD1P09032 578 aaPredicted RBP7.89□□□□□ -1.15
RPD3YNL330C FUS1P11710 512 aa7.89□□□□□ -1.15
RPD3YNL330C RPL3P14126 387 aaKnown RBP7.89□□□□□ -1.15
RPD3YNL330C PRO1P32264 428 aa7.89□□□□□ -1.15
RPD3YNL330C PPG1P32838 368 aa7.89□□□□□ -1.15
RPD3YNL330C MDL1P33310 695 aa7.89□□□□□ -1.15
RPD3YNL330C AIM46P38885 310 aa7.89□□□□□ -1.15
RPD3YNL330C MNL1P38888 796 aa7.89□□□□□ -1.15
RPD3YNL330C FMP52P40008 231 aa7.89□□□□□ -1.15
RPD3YNL330C GIP2P40036 548 aa7.89□□□□□ -1.15
RPD3YNL330C FHN1P53279 174 aa7.89□□□□□ -1.15
Retrieved 100 of 5,963 RNA–protein pairs in 34.7 ms