RNA–Protein interactions for RNA: YLR003C

CMS1, Transcript of Putative subunit of the 90S preribosome processome complex, yeastyeast

Gene CMS1, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMS1YLR003C UFE1P41834 346 aa1.8□□□□□ -2.12
CMS1YLR003C YGR266WP53326 701 aa1.8□□□□□ -2.12
CMS1YLR003C STE23Q06010 1027 aa1.8□□□□□ -2.12
CMS1YLR003C MRX9Q07349 420 aaKnown RBP1.8□□□□□ -2.12
CMS1YLR003C PBP4Q07362 185 aaKnown RBP1.8□□□□□ -2.12
CMS1YLR003C RDL2Q08742 149 aaKnown RBP1.8□□□□□ -2.12
CMS1YLR003C RTC5Q12108 567 aaKnown RBP1.8□□□□□ -2.12
CMS1YLR003C MDY2Q12285 212 aa1.8□□□□□ -2.12
CMS1YLR003C SAL1D6W196 494 aa1.79□□□□□ -2.12
CMS1YLR003C CKA2P19454 339 aa1.79□□□□□ -2.12
CMS1YLR003C KRR1P25586 316 aaPredicted RBP1.79□□□□□ -2.12
CMS1YLR003C TPS2P31688 896 aaKnown RBP1.79□□□□□ -2.12
CMS1YLR003C SUR1P33300 382 aa1.79□□□□□ -2.12
CMS1YLR003C FET3P38993 636 aa1.79□□□□□ -2.12
CMS1YLR003C YIL054WP40524 105 aa1.79□□□□□ -2.12
CMS1YLR003C YGL118CP53132 145 aa1.79□□□□□ -2.12
CMS1YLR003C CAX4P53223 239 aa1.79□□□□□ -2.12
CMS1YLR003C INP2Q03824 705 aa1.79□□□□□ -2.12
CMS1YLR003C FAR10Q06001 478 aa1.79□□□□□ -2.12
CMS1YLR003C YPR195CQ06594 109 aa1.79□□□□□ -2.12
CMS1YLR003C DTD1Q07648 150 aaKnown RBP1.79□□□□□ -2.12
CMS1YLR003C MIM1Q08176 113 aa1.79□□□□□ -2.12
CMS1YLR003C YDR018CQ12185 396 aa1.79□□□□□ -2.12
CMS1YLR003C CAR2P07991 424 aaKnown RBP1.78□□□□□ -2.12
CMS1YLR003C COX10P21592 462 aa1.78□□□□□ -2.12
CMS1YLR003C AST1P35183 429 aa1.78□□□□□ -2.12
CMS1YLR003C YKL162CP36052 402 aa1.78□□□□□ -2.12
CMS1YLR003C TRR2P38816 342 aa1.78□□□□□ -2.12
CMS1YLR003C PET8P38921 284 aa1.78□□□□□ -2.12
CMS1YLR003C YIL059CP40520 121 aa1.78□□□□□ -2.12
CMS1YLR003C HST4P53688 370 aa1.78□□□□□ -2.12
CMS1YLR003C SNX41Q04053 625 aa1.78□□□□□ -2.12
CMS1YLR003C UTP23Q12339 254 aaKnown RBP1.78□□□□□ -2.12
CMS1YLR003C CBP2P03874 630 aaPredicted RBP1.77□□□□□ -2.13
CMS1YLR003C PET18P25362 215 aa1.77□□□□□ -2.13
CMS1YLR003C RPL16BP26785 198 aaKnown RBP1.77□□□□□ -2.13
CMS1YLR003C IME2P32581 645 aa1.77□□□□□ -2.13
CMS1YLR003C RCK1P38622 512 aa1.77□□□□□ -2.13
CMS1YLR003C PES4P39684 611 aa1.77□□□□□ -2.13
CMS1YLR003C SLM1P40485 686 aa1.77□□□□□ -2.13
CMS1YLR003C PMT4P46971 762 aa1.77□□□□□ -2.13
CMS1YLR003C RIB4P50861 169 aaPredicted RBP1.77□□□□□ -2.13
CMS1YLR003C SDS23P53172 527 aa1.77□□□□□ -2.13
CMS1YLR003C VOA1P53262 265 aa1.77□□□□□ -2.13
CMS1YLR003C DIA1P54005 336 aa1.77□□□□□ -2.13
CMS1YLR003C VPS20Q04272 221 aa1.77□□□□□ -2.13
CMS1YLR003C APC4Q04601 652 aa1.77□□□□□ -2.13
CMS1YLR003C YPL245WQ12179 454 aaKnown RBP1.77□□□□□ -2.13
CMS1YLR003C RRP42Q12277 265 aaPredicted RBP1.77□□□□□ -2.13
CMS1YLR003C PRM4Q12498 284 aa1.77□□□□□ -2.13
CMS1YLR003C GCD2P12754 651 aaPredicted RBP1.76□□□□□ -2.13
CMS1YLR003C CPT1P17898 393 aa1.76□□□□□ -2.13
CMS1YLR003C YKL187CP34231 750 aa1.76□□□□□ -2.13
CMS1YLR003C SWD2P36104 329 aaPredicted RBP1.76□□□□□ -2.13
CMS1YLR003C PRY2P36110 329 aa1.76□□□□□ -2.13
CMS1YLR003C YDR089WP38966 869 aa1.76□□□□□ -2.13
CMS1YLR003C YIL012WP40551 113 aa1.76□□□□□ -2.13
CMS1YLR003C INA22P40576 216 aa1.76□□□□□ -2.13
CMS1YLR003C YFL040WP43562 540 aa1.76□□□□□ -2.13
CMS1YLR003C DBP6P53734 629 aaKnown RBP1.76□□□□□ -2.13
CMS1YLR003C YNR066CP53752 436 aa1.76□□□□□ -2.13
CMS1YLR003C MGR3Q04472 501 aa1.76□□□□□ -2.13
CMS1YLR003C YLR012CQ07927 99 aa1.76□□□□□ -2.13
CMS1YLR003C YPL278CQ08990 100 aa1.76□□□□□ -2.13
CMS1YLR003C VIK1Q12045 647 aa1.76□□□□□ -2.13
CMS1YLR003C PAA1Q12447 191 aaKnown RBP1.76□□□□□ -2.13
CMS1YLR003C DFM1Q12743 341 aaKnown RBP1.76□□□□□ -2.13
CMS1YLR003C LAG2Q92325 660 aa1.76□□□□□ -2.13
CMS1YLR003C SAR1P20606 190 aaKnown RBP1.75□□□□□ -2.13
CMS1YLR003C CDC13P32797 924 aaKnown RBP1.75□□□□□ -2.13
CMS1YLR003C MRPL6P32904 214 aa1.75□□□□□ -2.13
CMS1YLR003C FRM2P37261 193 aa1.75□□□□□ -2.13
CMS1YLR003C YHR035WP38769 630 aa1.75□□□□□ -2.13
CMS1YLR003C SOP4P39543 234 aaPredicted RBP1.75□□□□□ -2.13
CMS1YLR003C YIA6P40556 373 aa1.75□□□□□ -2.13
CMS1YLR003C SWC4P53201 476 aa1.75□□□□□ -2.13
CMS1YLR003C OKP1P53298 406 aa1.75□□□□□ -2.13
CMS1YLR003C PRO2P54885 456 aaKnown RBP1.75□□□□□ -2.13
CMS1YLR003C SMD1Q02260 146 aaPredicted RBP1.75□□□□□ -2.13
CMS1YLR003C UBX2Q04228 584 aa1.75□□□□□ -2.13
CMS1YLR003C GMC1Q04399 608 aa1.75□□□□□ -2.13
CMS1YLR003C ECM19Q06011 112 aa1.75□□□□□ -2.13
CMS1YLR003C ERP3Q12403 225 aa1.75□□□□□ -2.13
CMS1YLR003C IZH4Q99393 312 aa1.75□□□□□ -2.13
CMS1YLR003C TDH3P00359 332 aaKnown RBP RIP-Chip data1.74□□□□□ -2.13not detected
CMS1YLR003C CUP2P15315 225 aa1.74□□□□□ -2.13
CMS1YLR003C CSM1P25651 190 aa1.74□□□□□ -2.13
CMS1YLR003C RPB9P27999 122 aa1.74□□□□□ -2.13
CMS1YLR003C MNN9P39107 395 aaKnown RBP1.74□□□□□ -2.13
CMS1YLR003C EDC2P40023 145 aaPredicted RBP1.74□□□□□ -2.13
CMS1YLR003C RRG9P40156 214 aa1.74□□□□□ -2.13
CMS1YLR003C MIC19P43594 170 aa1.74□□□□□ -2.13
CMS1YLR003C ZRG17P53735 605 aa1.74□□□□□ -2.13
CMS1YLR003C ARC18Q05933 178 aaKnown RBP1.74□□□□□ -2.13
CMS1YLR003C YOR292CQ08743 309 aa1.74□□□□□ -2.13
CMS1YLR003C APC9Q12107 265 aa1.74□□□□□ -2.13
CMS1YLR003C POM33Q12164 279 aa1.74□□□□□ -2.13
CMS1YLR003C PFK27Q12471 397 aaPredicted RBP1.74□□□□□ -2.13
CMS1YLR003C RPL5P26321 297 aaKnown RBP1.73□□□□□ -2.13
CMS1YLR003C IMP1P28627 190 aa1.73□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 65.4 ms