RNA–Protein interactions for RNA: YKR077W

MSA2, Transcript of Putative transcriptional activator, yeastyeast

Gene MSA2, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSA2YKR077W SSO2P39926 295 aa3.59□□□□□ -1.83
MSA2YKR077W PRO2P54885 456 aaKnown RBP3.59□□□□□ -1.83
MSA2YKR077W CAB5Q03941 241 aa3.59□□□□□ -1.83
MSA2YKR077W UBX2Q04228 584 aa3.59□□□□□ -1.83
MSA2YKR077W GMC1Q04399 608 aa3.59□□□□□ -1.83
MSA2YKR077W YLR297WQ05899 129 aa3.59□□□□□ -1.83
MSA2YKR077W MIM1Q08176 113 aa3.59□□□□□ -1.83
MSA2YKR077W DFM1Q12743 341 aaKnown RBP3.59□□□□□ -1.83
MSA2YKR077W PET18P25362 215 aa3.58□□□□□ -1.84
MSA2YKR077W POP2P39008 433 aa3.58□□□□□ -1.84
MSA2YKR077W END3P39013 349 aa3.58□□□□□ -1.84
MSA2YKR077W MIC19P43594 170 aa3.58□□□□□ -1.84
MSA2YKR077W IRC4Q03036 179 aa3.58□□□□□ -1.84
MSA2YKR077W ECM19Q06011 112 aa3.58□□□□□ -1.84
MSA2YKR077W SUR1P33300 382 aa3.57□□□□□ -1.84
MSA2YKR077W YKL162CP36052 402 aa3.57□□□□□ -1.84
MSA2YKR077W DSE1P40077 573 aa3.57□□□□□ -1.84
MSA2YKR077W YFL040WP43562 540 aa3.57□□□□□ -1.84
MSA2YKR077W ZRG17P53735 605 aa3.57□□□□□ -1.84
MSA2YKR077W SMD1Q02260 146 aaPredicted RBP3.57□□□□□ -1.84
MSA2YKR077W YPR195CQ06594 109 aa3.57□□□□□ -1.84
MSA2YKR077W REX3Q12090 404 aa3.57□□□□□ -1.84
MSA2YKR077W RTC5Q12108 567 aaKnown RBP3.57□□□□□ -1.84
MSA2YKR077W YPL245WQ12179 454 aaKnown RBP3.57□□□□□ -1.84
MSA2YKR077W STF1P01098 86 aa3.56□□□□□ -1.84
MSA2YKR077W ERD1P16151 362 aa3.56□□□□□ -1.84
MSA2YKR077W SWC5P38326 303 aa3.56□□□□□ -1.84
MSA2YKR077W YMR262WP38430 313 aa3.56□□□□□ -1.84
MSA2YKR077W PET8P38921 284 aa3.56□□□□□ -1.84
MSA2YKR077W YIL054WP40524 105 aa3.56□□□□□ -1.84
MSA2YKR077W YPL080CQ02826 108 aa3.56□□□□□ -1.84
MSA2YKR077W VTI1Q04338 217 aa3.56□□□□□ -1.84
MSA2YKR077W DIB1Q06819 143 aaPredicted RBP3.56□□□□□ -1.84
MSA2YKR077W CBP2P03874 630 aaPredicted RBP3.55□□□□□ -1.84
MSA2YKR077W CPT1P17898 393 aa3.55□□□□□ -1.84
MSA2YKR077W MRPL20P22354 195 aaPredicted RBP3.55□□□□□ -1.84
MSA2YKR077W RPB9P27999 122 aa3.55□□□□□ -1.84
MSA2YKR077W ZRT1P32804 376 aa3.55□□□□□ -1.84
MSA2YKR077W AST1P35183 429 aa3.55□□□□□ -1.84
MSA2YKR077W YHR035WP38769 630 aa3.55□□□□□ -1.84
MSA2YKR077W YDR089WP38966 869 aa3.55□□□□□ -1.84
MSA2YKR077W SLM1P40485 686 aa3.55□□□□□ -1.84
MSA2YKR077W OKP1P53298 406 aa3.55□□□□□ -1.84
MSA2YKR077W ABZ2Q03266 374 aa3.55□□□□□ -1.84
MSA2YKR077W SAM4Q08985 325 aaKnown RBP3.55□□□□□ -1.84
MSA2YKR077W YPS3Q12303 508 aa3.55□□□□□ -1.84
MSA2YKR077W TRM10Q12400 293 aa3.55□□□□□ -1.84
MSA2YKR077W CUP2P15315 225 aa3.54□□□□□ -1.84
MSA2YKR077W MSS116P15424 664 aaKnown RBP3.54□□□□□ -1.84
MSA2YKR077W AGA2P32781 87 aa3.54□□□□□ -1.84
MSA2YKR077W SOP4P39543 234 aaPredicted RBP3.54□□□□□ -1.84
MSA2YKR077W CPR7P47103 393 aa3.54□□□□□ -1.84
MSA2YKR077W YGL118CP53132 145 aa3.54□□□□□ -1.84
MSA2YKR077W YNR066CP53752 436 aa3.54□□□□□ -1.84
MSA2YKR077W SNX41Q04053 625 aa3.54□□□□□ -1.84
MSA2YKR077W PAA1Q12447 191 aaKnown RBP3.54□□□□□ -1.84
MSA2YKR077W YPR1Q12458 312 aa3.54□□□□□ -1.84
MSA2YKR077W BI3Q9ZZW7 517 aa3.54□□□□□ -1.84
MSA2YKR077W FET3P38993 636 aa3.53□□□□□ -1.84
MSA2YKR077W OSW5P40219 148 aa3.53□□□□□ -1.84
MSA2YKR077W COS4P43542 379 aa3.53□□□□□ -1.84
MSA2YKR077W TFC7Q12415 435 aa3.53□□□□□ -1.84
MSA2YKR077W YIL059CP40520 121 aa3.52□□□□□ -1.85
MSA2YKR077W RIB4P50861 169 aaPredicted RBP3.52□□□□□ -1.85
MSA2YKR077W CAX4P53223 239 aa3.52□□□□□ -1.85
MSA2YKR077W UTP23Q12339 254 aaKnown RBP3.52□□□□□ -1.85
MSA2YKR077W GCD2P12754 651 aaPredicted RBP3.51□□□□□ -1.85
MSA2YKR077W INO2P26798 304 aa3.51□□□□□ -1.85
MSA2YKR077W ASG7P46993 209 aa3.51□□□□□ -1.85
MSA2YKR077W DBP6P53734 629 aaKnown RBP3.51□□□□□ -1.85
MSA2YKR077W PBP4Q07362 185 aaKnown RBP3.51□□□□□ -1.85
MSA2YKR077W VIK1Q12045 647 aa3.51□□□□□ -1.85
MSA2YKR077W CAR2P07991 424 aaKnown RBP3.5□□□□□ -1.85
MSA2YKR077W YGR266WP53326 701 aa3.5□□□□□ -1.85
MSA2YKR077W LAG2Q92325 660 aa3.5□□□□□ -1.85
MSA2YKR077W MCH2P36032 473 aa3.49□□□□□ -1.85
MSA2YKR077W ASP1P38986 381 aaPredicted RBP3.49□□□□□ -1.85
MSA2YKR077W LOH1P47055 219 aa3.49□□□□□ -1.85
MSA2YKR077W VOA1P53262 265 aa3.49□□□□□ -1.85
MSA2YKR077W SEC13Q04491 297 aaKnown RBP3.49□□□□□ -1.85
MSA2YKR077W CUR1Q06469 252 aa3.49□□□□□ -1.85
MSA2YKR077W YOR292CQ08743 309 aa3.49□□□□□ -1.85
MSA2YKR077W RFM1Q12192 310 aa3.49□□□□□ -1.85
MSA2YKR077W MDY2Q12285 212 aa3.49□□□□□ -1.85
MSA2YKR077W PRP46Q12417 451 aaPredicted RBP3.49□□□□□ -1.85
MSA2YKR077W TDH3P00359 332 aaKnown RBP RIP-Chip data3.48□□□□□ -1.85not detected
MSA2YKR077W MNN9P39107 395 aaKnown RBP3.48□□□□□ -1.85
MSA2YKR077W PES4P39684 611 aa3.48□□□□□ -1.85
MSA2YKR077W CDC40P40968 455 aaPredicted RBP3.48□□□□□ -1.85
MSA2YKR077W YMR111CQ04461 462 aaPredicted RBP3.48□□□□□ -1.85
MSA2YKR077W APC9Q12107 265 aa3.48□□□□□ -1.85
MSA2YKR077W ERP3Q12403 225 aa3.48□□□□□ -1.85
MSA2YKR077W DCP1Q12517 231 aaPredicted RBP3.48□□□□□ -1.85
MSA2YKR077W IZH4Q99393 312 aa3.48□□□□□ -1.85
MSA2YKR077W SAR1P20606 190 aaKnown RBP3.47□□□□□ -1.85
MSA2YKR077W RPL5P26321 297 aaKnown RBP3.47□□□□□ -1.85
MSA2YKR077W RPL16BP26785 198 aaKnown RBP3.47□□□□□ -1.85
MSA2YKR077W SWC4P53201 476 aa3.47□□□□□ -1.85
MSA2YKR077W ACT1P60010 375 aaKnown RBP3.47□□□□□ -1.85
MSA2YKR077W YLR446WQ06204 433 aa3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms