RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W GPN2Q08726 347 aaPredicted RBP5.47□□□□□ -1.53
PRE3YJL001W TFS1P14306 219 aa5.46□□□□□ -1.54
PRE3YJL001W SAN1P22470 610 aa5.46□□□□□ -1.54
PRE3YJL001W ELF1P36053 145 aa5.46□□□□□ -1.54
PRE3YJL001W YBR138CP38277 524 aa5.46□□□□□ -1.54
PRE3YJL001W YHR097CP38809 366 aaKnown RBP5.46□□□□□ -1.54
PRE3YJL001W FET3P38993 636 aa5.46□□□□□ -1.54
PRE3YJL001W ARF3P40994 183 aaRIP-Chip data5.46□□□□□ -1.54not detected
PRE3YJL001W DCP2P53550 970 aaKnown RBP5.46□□□□□ -1.54
PRE3YJL001W DBP6P53734 629 aaKnown RBP5.46□□□□□ -1.54
PRE3YJL001W YMR010WQ03687 405 aa5.46□□□□□ -1.54
PRE3YJL001W URC2Q04411 772 aa5.46□□□□□ -1.54
PRE3YJL001W COQ11Q05892 277 aa5.46□□□□□ -1.54
PRE3YJL001W PUT2P07275 575 aa5.45□□□□□ -1.54
PRE3YJL001W YMR085WP0CF18 432 aa5.45□□□□□ -1.54
PRE3YJL001W PHO91P27514 894 aa5.45□□□□□ -1.54
PRE3YJL001W RAD14P28519 371 aa5.45□□□□□ -1.54
PRE3YJL001W MCM10P32354 571 aa5.45□□□□□ -1.54
PRE3YJL001W MRPL36P36531 177 aa5.45□□□□□ -1.54
PRE3YJL001W MTC4P38335 694 aaKnown RBP5.45□□□□□ -1.54
PRE3YJL001W IDP2P41939 412 aa5.45□□□□□ -1.54
PRE3YJL001W QRI1P43123 477 aaKnown RBP5.45□□□□□ -1.54
PRE3YJL001W IMA1P53051 589 aa5.45□□□□□ -1.54
PRE3YJL001W PCP1P53259 346 aa5.45□□□□□ -1.54
PRE3YJL001W CTL1Q03220 320 aaKnown RBP5.45□□□□□ -1.54
PRE3YJL001W MRPL1Q04599 285 aa5.45□□□□□ -1.54
PRE3YJL001W COX20Q04935 205 aa5.45□□□□□ -1.54
PRE3YJL001W HOF1Q05080 669 aa5.45□□□□□ -1.54
PRE3YJL001W SGT1Q08446 395 aa5.45□□□□□ -1.54
PRE3YJL001W RDL2Q08742 149 aaKnown RBP5.45□□□□□ -1.54
PRE3YJL001W NCA2Q12374 616 aa5.45□□□□□ -1.54
PRE3YJL001W GEP5Q12393 293 aa5.45□□□□□ -1.54
PRE3YJL001W CAR1P00812 333 aaKnown RBP5.44□□□□□ -1.54
PRE3YJL001W RHO1P06780 209 aaKnown RBP5.44□□□□□ -1.54
PRE3YJL001W RER1P25560 188 aa5.44□□□□□ -1.54
PRE3YJL001W YCR051WP25631 222 aa5.44□□□□□ -1.54
PRE3YJL001W APL3P38065 1025 aa5.44□□□□□ -1.54
PRE3YJL001W DTR1P38125 572 aa5.44□□□□□ -1.54
PRE3YJL001W RFC4P40339 323 aaKnown RBP5.44□□□□□ -1.54
PRE3YJL001W LAS21P40367 830 aa5.44□□□□□ -1.54
PRE3YJL001W IDS2P46958 469 aa5.44□□□□□ -1.54
PRE3YJL001W RSN1Q03516 953 aa5.44□□□□□ -1.54
PRE3YJL001W MCP1Q12106 302 aa5.44□□□□□ -1.54
PRE3YJL001W YDL180WQ12301 547 aa5.44□□□□□ -1.54
PRE3YJL001W PSY3Q12318 242 aa5.44□□□□□ -1.54
PRE3YJL001W ITR1P30605 584 aa5.43□□□□□ -1.54
PRE3YJL001W PRE2P30656 287 aaKnown RBP5.43□□□□□ -1.54
PRE3YJL001W ARP2P32381 391 aaKnown RBP5.43□□□□□ -1.54
PRE3YJL001W CYS4P32582 507 aaKnown RBP5.43□□□□□ -1.54
PRE3YJL001W SLC1P33333 303 aa5.43□□□□□ -1.54
PRE3YJL001W MRPL17P36528 281 aa5.43□□□□□ -1.54
PRE3YJL001W ECM34P38728 170 aa5.43□□□□□ -1.54
PRE3YJL001W GDS1P41913 522 aa5.43□□□□□ -1.54
PRE3YJL001W TOS2P50078 622 aa5.43□□□□□ -1.54
PRE3YJL001W MRM2P53123 320 aa5.43□□□□□ -1.54
PRE3YJL001W YKU80Q04437 629 aa5.43□□□□□ -1.54
PRE3YJL001W YOR214CQ12282 236 aa5.43□□□□□ -1.54
PRE3YJL001W RPN6Q12377 434 aa5.43□□□□□ -1.54
PRE3YJL001W SET6Q12529 373 aa5.43□□□□□ -1.54
PRE3YJL001W SPO24Q3E752 67 aa5.43□□□□□ -1.54
PRE3YJL001W MER1P16523 270 aa5.42□□□□□ -1.54
PRE3YJL001W CLB3P24870 427 aa5.42□□□□□ -1.54
PRE3YJL001W TEF4P36008 412 aaKnown RBP5.42□□□□□ -1.54
PRE3YJL001W YBR220CP38318 560 aa5.42□□□□□ -1.54
PRE3YJL001W YHR180WP38868 163 aa5.42□□□□□ -1.54
PRE3YJL001W RGI1P40043 161 aaPredicted RBP5.42□□□□□ -1.54
PRE3YJL001W PRE6P40303 254 aaKnown RBP5.42□□□□□ -1.54
PRE3YJL001W YGR126WP53274 230 aa5.42□□□□□ -1.54
PRE3YJL001W COS6P53344 381 aa5.42□□□□□ -1.54
PRE3YJL001W MNT4P53745 580 aa5.42□□□□□ -1.54
PRE3YJL001W MRPL19P53875 158 aa5.42□□□□□ -1.54
PRE3YJL001W ARV1Q06541 321 aa5.42□□□□□ -1.54
PRE3YJL001W AIM6Q07716 390 aa5.42□□□□□ -1.54
PRE3YJL001W DCI1Q08558 271 aa5.42□□□□□ -1.54
PRE3YJL001W RKI1Q12189 258 aa5.42□□□□□ -1.54
PRE3YJL001W YOL087CQ99247 1116 aa5.42□□□□□ -1.54
PRE3YJL001W LHP1P33399 275 aaKnown RBP5.41□□□□□ -1.54
PRE3YJL001W ZTA1P38230 334 aaKnown RBP5.41□□□□□ -1.54
PRE3YJL001W RRP4P38792 359 aaKnown RBP5.41□□□□□ -1.54
PRE3YJL001W BNA1P47096 177 aa5.41□□□□□ -1.54
PRE3YJL001W SNF12P53628 566 aa5.41□□□□□ -1.54
PRE3YJL001W SMX3P54999 86 aaPredicted RBP5.41□□□□□ -1.54
PRE3YJL001W YPL108WQ02872 168 aaPredicted RBP5.41□□□□□ -1.54
PRE3YJL001W RNH1Q04740 348 aa5.41□□□□□ -1.54
PRE3YJL001W SFH1Q06168 426 aa5.41□□□□□ -1.54
PRE3YJL001W YAL064W-BO13512 126 aa5.4□□□□□ -1.54
PRE3YJL001W CCW14O13547 238 aa5.4□□□□□ -1.54
PRE3YJL001W RPS1BP23248 255 aaKnown RBP5.4□□□□□ -1.54
PRE3YJL001W ITR2P30606 609 aa5.4□□□□□ -1.54
PRE3YJL001W COG3P40094 801 aa5.4□□□□□ -1.54
PRE3YJL001W HXT9P40885 567 aa5.4□□□□□ -1.54
PRE3YJL001W ADO1P47143 340 aaKnown RBP5.4□□□□□ -1.54
PRE3YJL001W MTQ1P53944 314 aa5.4□□□□□ -1.54
PRE3YJL001W ASI1P54074 624 aa5.4□□□□□ -1.54
PRE3YJL001W HXT11P54862 567 aa5.4□□□□□ -1.54
PRE3YJL001W KAP120Q02932 1032 aa5.4□□□□□ -1.54
PRE3YJL001W FMN1Q03778 218 aa5.4□□□□□ -1.54
PRE3YJL001W SSQ1Q05931 657 aaPredicted RBP5.4□□□□□ -1.54
PRE3YJL001W BRX1Q08235 291 aaKnown RBP5.4□□□□□ -1.54
PRE3YJL001W SOF1P33750 489 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 5,963 RNA–protein pairs in 51.1 ms