RNA–Protein interactions for RNA: YGL228W

SHE10, Transcript of Protein involved in outer spore wall assembly, yeastyeast

Gene SHE10, Length 1,734 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE10YGL228W RRP9Q06506 573 aaKnown RBP4.93□□□□□ -1.62
SHE10YGL228W MLC2Q06580 163 aa4.93□□□□□ -1.62
SHE10YGL228W THP3Q12049 470 aaKnown RBP4.93□□□□□ -1.62
SHE10YGL228W MDM32Q12171 622 aa4.93□□□□□ -1.62
SHE10YGL228W YOR343CQ12484 108 aa4.93□□□□□ -1.62
SHE10YGL228W TRA1P38811 3744 aa4.93□□□□□ -1.62
SHE10YGL228W SCO1P23833 295 aa4.92□□□□□ -1.62
SHE10YGL228W CDC39P25655 2108 aaKnown RBP4.92□□□□□ -1.62
SHE10YGL228W SLC1P33333 303 aa4.92□□□□□ -1.62
SHE10YGL228W PAD1P33751 242 aaKnown RBP RIP-Chip data4.92□□□□□ -1.62not detected
SHE10YGL228W YER010CP40011 234 aa4.92□□□□□ -1.62
SHE10YGL228W DDI1P40087 428 aa4.92□□□□□ -1.62
SHE10YGL228W YER158CP40095 573 aa4.92□□□□□ -1.62
SHE10YGL228W JLP2P40206 208 aa4.92□□□□□ -1.62
SHE10YGL228W YIL165CP40446 119 aa4.92□□□□□ -1.62
SHE10YGL228W PKP1P40530 394 aa4.92□□□□□ -1.62
SHE10YGL228W SAM37P50110 327 aa4.92□□□□□ -1.62
SHE10YGL228W YGR054WP53235 642 aaKnown RBP4.92□□□□□ -1.62
SHE10YGL228W MNT4P53745 580 aa4.92□□□□□ -1.62
SHE10YGL228W FDC1Q03034 503 aa4.92□□□□□ -1.62
SHE10YGL228W YDR209CQ03480 137 aa4.92□□□□□ -1.62
SHE10YGL228W MRPL1Q04599 285 aa4.92□□□□□ -1.62
SHE10YGL228W BUR2Q05949 395 aa4.92□□□□□ -1.62
SHE10YGL228W BRE4Q07660 1125 aa4.92□□□□□ -1.62
SHE10YGL228W YDL176WQ12027 708 aa4.92□□□□□ -1.62
SHE10YGL228W ACF2Q12168 779 aa4.92□□□□□ -1.62
SHE10YGL228W SWM1Q12379 170 aa4.92□□□□□ -1.62
SHE10YGL228W SET6Q12529 373 aa4.92□□□□□ -1.62
SHE10YGL228W LSO1Q3E827 93 aa4.92□□□□□ -1.62
SHE10YGL228W CPR2P23285 205 aa4.92□□□□□ -1.62
SHE10YGL228W CLB2P24869 491 aa4.92□□□□□ -1.62
SHE10YGL228W MSN4P33749 630 aa4.92□□□□□ -1.62
SHE10YGL228W TPO5P36029 618 aa4.92□□□□□ -1.62
SHE10YGL228W DTR1P38125 572 aa4.92□□□□□ -1.62
SHE10YGL228W GPX2P38143 162 aa4.92□□□□□ -1.62
SHE10YGL228W CHK1P38147 527 aa4.92□□□□□ -1.62
SHE10YGL228W CHS7P38843 316 aa4.92□□□□□ -1.62
SHE10YGL228W SER3P40054 469 aa4.92□□□□□ -1.62
SHE10YGL228W BUR6P40096 142 aa4.92□□□□□ -1.62
SHE10YGL228W HIS6P40545 261 aa4.92□□□□□ -1.62
SHE10YGL228W YJL218WP40892 196 aaKnown RBP4.92□□□□□ -1.62
SHE10YGL228W PFS2P42841 465 aaKnown RBP4.92□□□□□ -1.62
SHE10YGL228W VOA1P53262 265 aa4.92□□□□□ -1.62
SHE10YGL228W MKC7P53379 596 aa4.92□□□□□ -1.62
SHE10YGL228W OGG1P53397 376 aaPredicted RBP4.92□□□□□ -1.62
SHE10YGL228W CPR8P53728 308 aa4.92□□□□□ -1.62
SHE10YGL228W SRL4Q03085 281 aa4.92□□□□□ -1.62
SHE10YGL228W RSM10Q03201 203 aa4.92□□□□□ -1.62
SHE10YGL228W PFA5Q03289 374 aa4.92□□□□□ -1.62
SHE10YGL228W TFB3Q03290 321 aa4.92□□□□□ -1.62
SHE10YGL228W SPC19Q03954 165 aa4.92□□□□□ -1.62
SHE10YGL228W MIX14Q04341 121 aa4.92□□□□□ -1.62
SHE10YGL228W YLR346CQ06139 101 aa4.92□□□□□ -1.62
SHE10YGL228W YDL114WQ07530 308 aa4.92□□□□□ -1.62
SHE10YGL228W YEL009C-AA0A023PZF2 135 aa4.91□□□□□ -1.62
SHE10YGL228W REP1P03871 373 aa4.91□□□□□ -1.62
SHE10YGL228W GIT1P25346 518 aa4.91□□□□□ -1.62
SHE10YGL228W YCR102CP25608 368 aa4.91□□□□□ -1.62
SHE10YGL228W PPA2P28239 310 aa4.91□□□□□ -1.62
SHE10YGL228W EHD3P28817 500 aa4.91□□□□□ -1.62
SHE10YGL228W THI2P38141 450 aa4.91□□□□□ -1.62
SHE10YGL228W ECO1P43605 281 aa4.91□□□□□ -1.62
SHE10YGL228W SFH5P47008 294 aa4.91□□□□□ -1.62
SHE10YGL228W ECL1P48235 211 aa4.91□□□□□ -1.62
SHE10YGL228W YGR066CP53242 292 aa4.91□□□□□ -1.62
SHE10YGL228W YGR126WP53274 230 aa4.91□□□□□ -1.62
SHE10YGL228W SAY1P53324 424 aa4.91□□□□□ -1.62
SHE10YGL228W ATG4P53867 494 aa4.91□□□□□ -1.62
SHE10YGL228W YDR249CQ03787 373 aa4.91□□□□□ -1.62
SHE10YGL228W GPI17Q04080 534 aa4.91□□□□□ -1.62
SHE10YGL228W YMR315WQ04869 349 aaKnown RBP4.91□□□□□ -1.62
SHE10YGL228W IRC19Q07843 230 aa4.91□□□□□ -1.62
SHE10YGL228W RDL2Q08742 149 aaKnown RBP4.91□□□□□ -1.62
SHE10YGL228W YOL114CQ12322 202 aa4.91□□□□□ -1.62
SHE10YGL228W TY1A-NL1Q12391 440 aaKnown RBP4.91□□□□□ -1.62
SHE10YGL228W FLO9P39712 1322 aa4.9□□□□□ -1.62
SHE10YGL228W NFT1P0CE68 1218 aa4.9□□□□□ -1.62
SHE10YGL228W YHR214C-DP0CX93 97 aa4.9□□□□□ -1.62
SHE10YGL228W SEC12P11655 471 aa4.9□□□□□ -1.62
SHE10YGL228W ERG8P24521 451 aa4.9□□□□□ -1.62
SHE10YGL228W PUB1P32588 453 aaKnown RBP RIP-Chip data4.9□□□□□ -1.62not detected
SHE10YGL228W ECT1P33412 323 aa4.9□□□□□ -1.62
SHE10YGL228W COS9P36034 407 aa4.9□□□□□ -1.62
SHE10YGL228W PHO90P39535 881 aa4.9□□□□□ -1.62
SHE10YGL228W YIL169CP40442 995 aa4.9□□□□□ -1.62
SHE10YGL228W SDP1P40479 209 aa4.9□□□□□ -1.62
SHE10YGL228W REE1P40893 198 aa4.9□□□□□ -1.62
SHE10YGL228W NIT2P47016 307 aa4.9□□□□□ -1.62
SHE10YGL228W YAE1P47118 141 aaPredicted RBP4.9□□□□□ -1.62
SHE10YGL228W YJR098CP47139 656 aa4.9□□□□□ -1.62
SHE10YGL228W NUP42P49686 430 aaKnown RBP4.9□□□□□ -1.62
SHE10YGL228W LYS5P50113 272 aa4.9□□□□□ -1.62
SHE10YGL228W CWC23P52868 283 aaPredicted RBP4.9□□□□□ -1.62
SHE10YGL228W SCS7Q03529 384 aa4.9□□□□□ -1.62
SHE10YGL228W GRX3Q03835 250 aa4.9□□□□□ -1.62
SHE10YGL228W AGE1Q04412 482 aa4.9□□□□□ -1.62
SHE10YGL228W HLR1Q04429 423 aa4.9□□□□□ -1.62
SHE10YGL228W YMR252CQ04814 134 aa4.9□□□□□ -1.62
SHE10YGL228W RBS1Q05672 457 aaKnown RBP4.9□□□□□ -1.62
SHE10YGL228W YOR032W-AQ8TGS1 66 aa4.9□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 33 ms