RNA–Protein interactions for RNA: YDR494W

RSM28, Transcript of Mitochondrial ribosomal protein of the small subunit, yeastyeast

Gene RSM28, Length 1,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RSM28YDR494W ASG7P46993 209 aa2.25□□□□□ -2.05
RSM28YDR494W GMC1Q04399 608 aa2.25□□□□□ -2.05
RSM28YDR494W ECM19Q06011 112 aa2.25□□□□□ -2.05
RSM28YDR494W DFM1Q12743 341 aaKnown RBP2.25□□□□□ -2.05
RSM28YDR494W CUP2P15315 225 aa2.24□□□□□ -2.05
RSM28YDR494W ERD1P16151 362 aa2.24□□□□□ -2.05
RSM28YDR494W TPM1P17536 199 aaKnown RBP2.24□□□□□ -2.05
RSM28YDR494W AGA2P32781 87 aa2.24□□□□□ -2.05
RSM28YDR494W YIL059CP40520 121 aa2.24□□□□□ -2.05
RSM28YDR494W CPR7P47103 393 aa2.24□□□□□ -2.05
RSM28YDR494W SMD1Q02260 146 aaPredicted RBP2.24□□□□□ -2.05
RSM28YDR494W STE23Q06010 1027 aa2.24□□□□□ -2.05
RSM28YDR494W YLR012CQ07927 99 aa2.24□□□□□ -2.05
RSM28YDR494W MIM1Q08176 113 aa2.24□□□□□ -2.05
RSM28YDR494W CDC37P06101 506 aaKnown RBP2.23□□□□□ -2.05
RSM28YDR494W RPB9P27999 122 aa2.23□□□□□ -2.05
RSM28YDR494W YPS1P32329 569 aa2.23□□□□□ -2.05
RSM28YDR494W BUD2P33314 1104 aa2.23□□□□□ -2.05
RSM28YDR494W END3P39013 349 aa2.23□□□□□ -2.05
RSM28YDR494W SLM1P40485 686 aa2.23□□□□□ -2.05
RSM28YDR494W UTP25P40498 721 aaKnown RBP2.23□□□□□ -2.05
RSM28YDR494W YGL118CP53132 145 aa2.23□□□□□ -2.05
RSM28YDR494W CAX4P53223 239 aa2.23□□□□□ -2.05
RSM28YDR494W IRC4Q03036 179 aa2.23□□□□□ -2.05
RSM28YDR494W VTI1Q04338 217 aa2.23□□□□□ -2.05
RSM28YDR494W YPL245WQ12179 454 aaKnown RBP2.23□□□□□ -2.05
RSM28YDR494W MRPL20P22354 195 aaPredicted RBP2.22□□□□□ -2.05
RSM28YDR494W IME2P32581 645 aa2.22□□□□□ -2.05
RSM28YDR494W ZRT1P32804 376 aa2.22□□□□□ -2.05
RSM28YDR494W PET8P38921 284 aa2.22□□□□□ -2.05
RSM28YDR494W AIM20P40451 204 aa2.22□□□□□ -2.05
RSM28YDR494W INA22P40576 216 aa2.22□□□□□ -2.05
RSM28YDR494W COS4P43542 379 aa2.22□□□□□ -2.05
RSM28YDR494W YPL080CQ02826 108 aa2.22□□□□□ -2.05
RSM28YDR494W CAB5Q03941 241 aa2.22□□□□□ -2.05
RSM28YDR494W UBX2Q04228 584 aa2.22□□□□□ -2.05
RSM28YDR494W YLR297WQ05899 129 aa2.22□□□□□ -2.05
RSM28YDR494W DIB1Q06819 143 aaPredicted RBP2.22□□□□□ -2.05
RSM28YDR494W SAM4Q08985 325 aaKnown RBP2.22□□□□□ -2.05
RSM28YDR494W TFC7Q12415 435 aa2.22□□□□□ -2.05
RSM28YDR494W SSO2P39926 295 aa2.21□□□□□ -2.06
RSM28YDR494W YNR066CP53752 436 aa2.21□□□□□ -2.06
RSM28YDR494W SNX41Q04053 625 aa2.21□□□□□ -2.06
RSM28YDR494W MGR3Q04472 501 aa2.21□□□□□ -2.06
RSM28YDR494W TRM10Q12400 293 aa2.21□□□□□ -2.06
RSM28YDR494W YPR1Q12458 312 aa2.21□□□□□ -2.06
RSM28YDR494W STF1P01098 86 aa2.2□□□□□ -2.06
RSM28YDR494W CBP2P03874 630 aaPredicted RBP2.2□□□□□ -2.06
RSM28YDR494W INO2P26798 304 aa2.2□□□□□ -2.06
RSM28YDR494W SUR1P33300 382 aa2.2□□□□□ -2.06
RSM28YDR494W YKL162CP36052 402 aa2.2□□□□□ -2.06
RSM28YDR494W SWC5P38326 303 aa2.2□□□□□ -2.06
RSM28YDR494W YHR035WP38769 630 aa2.2□□□□□ -2.06
RSM28YDR494W SOP4P39543 234 aaPredicted RBP2.2□□□□□ -2.06
RSM28YDR494W VPS20Q04272 221 aa2.2□□□□□ -2.06
RSM28YDR494W VIK1Q12045 647 aa2.2□□□□□ -2.06
RSM28YDR494W UTP23Q12339 254 aaKnown RBP2.2□□□□□ -2.06
RSM28YDR494W PRP46Q12417 451 aaPredicted RBP2.2□□□□□ -2.06
RSM28YDR494W PET18P25362 215 aa2.19□□□□□ -2.06
RSM28YDR494W ASP1P38986 381 aaPredicted RBP2.19□□□□□ -2.06
RSM28YDR494W FET3P38993 636 aa2.19□□□□□ -2.06
RSM28YDR494W POP2P39008 433 aa2.19□□□□□ -2.06
RSM28YDR494W YFL040WP43562 540 aa2.19□□□□□ -2.06
RSM28YDR494W OKP1P53298 406 aa2.19□□□□□ -2.06
RSM28YDR494W ABZ2Q03266 374 aa2.19□□□□□ -2.06
RSM28YDR494W PBP4Q07362 185 aaKnown RBP2.19□□□□□ -2.06
RSM28YDR494W PAA1Q12447 191 aaKnown RBP2.19□□□□□ -2.06
RSM28YDR494W KRR1P25586 316 aaPredicted RBP2.18□□□□□ -2.06
RSM28YDR494W EDC2P40023 145 aaPredicted RBP2.18□□□□□ -2.06
RSM28YDR494W RPN14P53196 417 aa2.18□□□□□ -2.06
RSM28YDR494W YGR266WP53326 701 aa2.18□□□□□ -2.06
RSM28YDR494W PRO2P54885 456 aaKnown RBP2.18□□□□□ -2.06
RSM28YDR494W YOR292CQ08743 309 aa2.18□□□□□ -2.06
RSM28YDR494W REX3Q12090 404 aa2.18□□□□□ -2.06
RSM28YDR494W RTC5Q12108 567 aaKnown RBP2.18□□□□□ -2.06
RSM28YDR494W ERP3Q12403 225 aa2.18□□□□□ -2.06
RSM28YDR494W TDH3P00359 332 aaKnown RBP RIP-Chip data2.17□□□□□ -2.06not detected
RSM28YDR494W RPS23AP0CX29 145 aaKnown RBP2.17□□□□□ -2.06
RSM28YDR494W RPS23BP0CX30 145 aa2.17□□□□□ -2.06
RSM28YDR494W HPR1P17629 752 aaKnown RBP2.17□□□□□ -2.06
RSM28YDR494W MRPL6P32904 214 aa2.17□□□□□ -2.06
RSM28YDR494W OSW5P40219 148 aa2.17□□□□□ -2.06
RSM28YDR494W YPL264CQ08980 353 aa2.17□□□□□ -2.06
RSM28YDR494W LAG2Q92325 660 aa2.17□□□□□ -2.06
RSM28YDR494W IZH4Q99393 312 aa2.17□□□□□ -2.06
RSM28YDR494W YPR096CO13587 100 aa2.16□□□□□ -2.06
RSM28YDR494W CAR2P07991 424 aaKnown RBP2.16□□□□□ -2.06
RSM28YDR494W MSS116P15424 664 aaKnown RBP2.16□□□□□ -2.06
RSM28YDR494W RPL16BP26785 198 aaKnown RBP2.16□□□□□ -2.06
RSM28YDR494W CSE1P33307 960 aa2.16□□□□□ -2.06
RSM28YDR494W MCH2P36032 473 aa2.16□□□□□ -2.06
RSM28YDR494W AIM29P36154 155 aa2.16□□□□□ -2.06
RSM28YDR494W ECM14P38836 430 aa2.16□□□□□ -2.06
RSM28YDR494W YDR089WP38966 869 aa2.16□□□□□ -2.06
RSM28YDR494W SPO73P40031 143 aa2.16□□□□□ -2.06
RSM28YDR494W RIB4P50861 169 aaPredicted RBP2.16□□□□□ -2.06
RSM28YDR494W SWC4P53201 476 aa2.16□□□□□ -2.06
RSM28YDR494W ACT1P60010 375 aaKnown RBP2.16□□□□□ -2.06
RSM28YDR494W CSI1Q04368 295 aa2.16□□□□□ -2.06
RSM28YDR494W YMR111CQ04461 462 aaPredicted RBP2.16□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 73.2 ms