RNA–Protein interactions for RNA: YDL084W

SUB2, Transcript of Component of the TREX complex required for nuclear mRNA export, yeast

Gene SUB2, Length 1,341 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SUB2	YDL084W	NDJ1	Q12366	352 aa		5.42	□□□□□ -1.54
SUB2	YDL084W	YKL183C-A	Q3E765	70 aa		5.42	□□□□□ -1.54
SUB2	YDL084W	RPS21A	P0C0V8	87 aa	Known RBP	5.41	□□□□□ -1.54
SUB2	YDL084W	POX1	P13711	748 aa		5.41	□□□□□ -1.54
SUB2	YDL084W	RPB10	P22139	70 aa		5.41	□□□□□ -1.54
SUB2	YDL084W	ILV6	P25605	309 aa	Known RBP	5.41	□□□□□ -1.54
SUB2	YDL084W	MRPL9	P31334	269 aa		5.41	□□□□□ -1.54
SUB2	YDL084W	SYN8	P31377	255 aa		5.41	□□□□□ -1.54
SUB2	YDL084W	YEF1	P32622	495 aa		5.41	□□□□□ -1.54
SUB2	YDL084W	RAD23	P32628	398 aa	Known RBP	5.41	□□□□□ -1.54
SUB2	YDL084W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	5.41	□□□□□ -1.54	not detected
SUB2	YDL084W	WBP1	P33767	430 aa	Known RBP	5.41	□□□□□ -1.54
SUB2	YDL084W	CBP4	P37267	147 aa		5.41	□□□□□ -1.54
SUB2	YDL084W	APN2	P38207	520 aa		5.41	□□□□□ -1.54
SUB2	YDL084W	SLM4	P38247	162 aa		5.41	□□□□□ -1.54
SUB2	YDL084W	IML3	P38265	245 aa		5.41	□□□□□ -1.54
SUB2	YDL084W	GIC1	P38785	314 aa		5.41	□□□□□ -1.54
SUB2	YDL084W	YHR210C	P38893	341 aa		5.41	□□□□□ -1.54
SUB2	YDL084W	UTP7	P40055	554 aa	Known RBP	5.41	□□□□□ -1.54
SUB2	YDL084W	GTS1	P40956	396 aa		5.41	□□□□□ -1.54
SUB2	YDL084W	FKH2	P41813	862 aa		5.41	□□□□□ -1.54
SUB2	YDL084W	GSM1	P42950	618 aa		5.41	□□□□□ -1.54
SUB2	YDL084W	DPB11	P47027	764 aa	Predicted RBP	5.41	□□□□□ -1.54
SUB2	YDL084W	AVT4	P50944	713 aa		5.41	□□□□□ -1.54
SUB2	YDL084W	TAD1	P53065	400 aa		5.41	□□□□□ -1.54
SUB2	YDL084W	FLC3	P53121	802 aa		5.41	□□□□□ -1.54
SUB2	YDL084W	YNL184C	P53876	108 aa		5.41	□□□□□ -1.54
SUB2	YDL084W	IDP3	P53982	420 aa	Known RBP	5.41	□□□□□ -1.54
SUB2	YDL084W	USB1	Q12208	290 aa	Known RBP	5.41	□□□□□ -1.54
SUB2	YDL084W	FOL3	Q12676	427 aa	Predicted RBP	5.41	□□□□□ -1.54
SUB2	YDL084W	YPT6	Q99260	215 aa		5.41	□□□□□ -1.54
SUB2	YDL084W	PDR12	Q02785	1511 aa		5.41	□□□□□ -1.54
SUB2	YDL084W	TY1B-BR	Q12193	1756 aa		5.41	□□□□□ -1.54
SUB2	YDL084W	TY1B-GR3	Q12316	1755 aa		5.41	□□□□□ -1.54
SUB2	YDL084W	TY1B-OR	Q92393	1755 aa		5.41	□□□□□ -1.54
SUB2	YDL084W	COX2	P00410	251 aa		5.4	□□□□□ -1.55
SUB2	YDL084W	TPI1	P00942	248 aa	Known RBP	5.4	□□□□□ -1.55
SUB2	YDL084W	TPK2	P06245	380 aa		5.4	□□□□□ -1.55
SUB2	YDL084W	HIP1	P06775	603 aa		5.4	□□□□□ -1.55
SUB2	YDL084W	SAM2	P19358	384 aa	Known RBP	5.4	□□□□□ -1.55
SUB2	YDL084W	YMR31	P19955	123 aa		5.4	□□□□□ -1.55
SUB2	YDL084W	URK1	P27515	501 aa		5.4	□□□□□ -1.55
SUB2	YDL084W	CYS3	P31373	394 aa	Known RBP	5.4	□□□□□ -1.55
SUB2	YDL084W	ARO7	P32178	256 aa		5.4	□□□□□ -1.55
SUB2	YDL084W	SCD5	P34758	872 aa		5.4	□□□□□ -1.55
SUB2	YDL084W	AVT5	P38176	459 aa		5.4	□□□□□ -1.55
SUB2	YDL084W	MMS21	P38632	267 aa		5.4	□□□□□ -1.55
SUB2	YDL084W	HEM14	P40012	539 aa		5.4	□□□□□ -1.55
SUB2	YDL084W	DSE1	P40077	573 aa		5.4	□□□□□ -1.55
SUB2	YDL084W	MOB1	P40484	314 aa		5.4	□□□□□ -1.55
SUB2	YDL084W	YJL107C	P42947	387 aa		5.4	□□□□□ -1.55
SUB2	YDL084W	BST1	P43571	1029 aa		5.4	□□□□□ -1.55
SUB2	YDL084W	GLO1	P50107	326 aa		5.4	□□□□□ -1.55
SUB2	YDL084W	BUD32	P53323	261 aa		5.4	□□□□□ -1.55
SUB2	YDL084W	HXT15	P54854	567 aa		5.4	□□□□□ -1.55
SUB2	YDL084W	YPL077C	Q02831	240 aa		5.4	□□□□□ -1.55
SUB2	YDL084W	GIP3	Q03016	1276 aa		5.4	□□□□□ -1.55
SUB2	YDL084W	TAF9	Q05027	157 aa		5.4	□□□□□ -1.55
SUB2	YDL084W	EST2	Q06163	884 aa		5.4	□□□□□ -1.55
SUB2	YDL084W	TMA10	Q06177	86 aa		5.4	□□□□□ -1.55
SUB2	YDL084W	GAS5	Q08193	484 aa		5.4	□□□□□ -1.55
SUB2	YDL084W	MED7	Q08278	222 aa		5.4	□□□□□ -1.55
SUB2	YDL084W	TRM11	Q12463	433 aa		5.4	□□□□□ -1.55
SUB2	YDL084W	YLR099W-A	Q3E798	87 aa		5.4	□□□□□ -1.55
SUB2	YDL084W	ECM3	Q99252	613 aa		5.4	□□□□□ -1.55
SUB2	YDL084W	RRP5	Q05022	1729 aa	Known RBP	5.39	□□□□□ -1.55
SUB2	YDL084W	SAL1	D6W196	494 aa		5.39	□□□□□ -1.55
SUB2	YDL084W	YLR302C	O13544	120 aa		5.39	□□□□□ -1.55
SUB2	YDL084W	REP2	P03872	296 aa		5.39	□□□□□ -1.55
SUB2	YDL084W	YFR010W-A	P0C5N0	62 aa		5.39	□□□□□ -1.55
SUB2	YDL084W	RPS18A	P0CX55	146 aa	Known RBP	5.39	□□□□□ -1.55
SUB2	YDL084W	RPS18B	P0CX56	146 aa	Predicted RBP	5.39	□□□□□ -1.55
SUB2	YDL084W	DAL82	P21705	255 aa		5.39	□□□□□ -1.55
SUB2	YDL084W	SEC22	P22214	214 aa		5.39	□□□□□ -1.55
SUB2	YDL084W	RFA3	P26755	122 aa	Known RBP	5.39	□□□□□ -1.55
SUB2	YDL084W	MSK1	P32048	576 aa		5.39	□□□□□ -1.55
SUB2	YDL084W	ISC10	P32645	267 aa		5.39	□□□□□ -1.55
SUB2	YDL084W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	5.39	□□□□□ -1.55	not detected
SUB2	YDL084W	YKL077W	P36081	392 aa		5.39	□□□□□ -1.55
SUB2	YDL084W	YKL075C	P36083	450 aa		5.39	□□□□□ -1.55
SUB2	YDL084W	PRS4	P38063	326 aa	Predicted RBP	5.39	□□□□□ -1.55
SUB2	YDL084W	EXO5	P38289	585 aa		5.39	□□□□□ -1.55
SUB2	YDL084W	IPI1	P38803	334 aa	Predicted RBP	5.39	□□□□□ -1.55
SUB2	YDL084W	PLB1	P39105	664 aa		5.39	□□□□□ -1.55
SUB2	YDL084W	SEC24	P40482	926 aa	Known RBP	5.39	□□□□□ -1.55
SUB2	YDL084W	MAF1	P41910	395 aa		5.39	□□□□□ -1.55
SUB2	YDL084W	ERJ5	P43613	295 aa	Predicted RBP	5.39	□□□□□ -1.55
SUB2	YDL084W	CIN2	P46670	268 aa		5.39	□□□□□ -1.55
SUB2	YDL084W	AAD10	P47182	288 aa		5.39	□□□□□ -1.55
SUB2	YDL084W	DIE2	P50076	525 aa		5.39	□□□□□ -1.55
SUB2	YDL084W	GTR2	P53290	341 aa		5.39	□□□□□ -1.55
SUB2	YDL084W	IBD2	P53892	351 aa		5.39	□□□□□ -1.55
SUB2	YDL084W	ARK1	P53974	638 aa		5.39	□□□□□ -1.55
SUB2	YDL084W	SPP2	Q02521	185 aa		5.39	□□□□□ -1.55
SUB2	YDL084W	STD1	Q02794	444 aa		5.39	□□□□□ -1.55
SUB2	YDL084W	YET2	Q04210	160 aa		5.39	□□□□□ -1.55
SUB2	YDL084W	MDM30	Q05930	598 aa		5.39	□□□□□ -1.55
SUB2	YDL084W	BNA5	Q05979	453 aa		5.39	□□□□□ -1.55
SUB2	YDL084W	MRI1	Q06489	411 aa	Known RBP	5.39	□□□□□ -1.55
SUB2	YDL084W	SUE1	Q06524	206 aa		5.39	□□□□□ -1.55

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms