RNA–Protein interactions for RNA: YCR093W

CDC39, Transcript of Component of the CCR4-NOT1 core complex, yeastyeast

Gene CDC39, Length 6,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC39YCR093W BCP1Q06338 283 aa1.03□□□□□ -2.24
CDC39YCR093W BTS1Q12051 335 aa1.03□□□□□ -2.24
CDC39YCR093W SIA1Q12212 622 aa1.03□□□□□ -2.24
CDC39YCR093W SFM1Q12314 213 aa1.03□□□□□ -2.24
CDC39YCR093W UTP10P42945 1769 aaKnown RBP1.03□□□□□ -2.24
CDC39YCR093W YFL068WP0CX99 160 aa1.03□□□□□ -2.24
CDC39YCR093W YLL066W-AP0CY00 160 aa1.03□□□□□ -2.24
CDC39YCR093W YLL067W-AP0CY01 160 aa1.03□□□□□ -2.24
CDC39YCR093W RRT12P25381 491 aa1.03□□□□□ -2.24
CDC39YCR093W VPH2P32341 215 aa1.03□□□□□ -2.24
CDC39YCR093W SPR1P32603 445 aa1.03□□□□□ -2.24
CDC39YCR093W AVT5P38176 459 aa1.03□□□□□ -2.24
CDC39YCR093W PFS1P38872 237 aa1.03□□□□□ -2.24
CDC39YCR093W YER186CP40101 306 aa1.03□□□□□ -2.24
CDC39YCR093W KEG1P43614 200 aa1.03□□□□□ -2.24
CDC39YCR093W COQ5P49017 307 aa1.03□□□□□ -2.24
CDC39YCR093W YGL262WP53054 175 aa1.03□□□□□ -2.24
CDC39YCR093W PXR1P53335 271 aaPredicted RBP1.03□□□□□ -2.24
CDC39YCR093W PDR16P53860 351 aaKnown RBP1.03□□□□□ -2.24
CDC39YCR093W UTP15Q04305 513 aaKnown RBP1.03□□□□□ -2.24
CDC39YCR093W RRG7Q08774 242 aaPredicted RBP1.03□□□□□ -2.24
CDC39YCR093W SFG1Q12507 346 aa1.03□□□□□ -2.24
CDC39YCR093W SSO1P32867 290 aa1.03□□□□□ -2.24
CDC39YCR093W MRPL10P36520 322 aa1.03□□□□□ -2.24
CDC39YCR093W SWC5P38326 303 aa1.03□□□□□ -2.24
CDC39YCR093W DED81P38707 554 aaKnown RBP1.03□□□□□ -2.24
CDC39YCR093W STB1P42845 420 aa1.03□□□□□ -2.24
CDC39YCR093W ILM1P47155 203 aa1.03□□□□□ -2.24
CDC39YCR093W KAP114P53067 1004 aa1.03□□□□□ -2.24
CDC39YCR093W ASR1Q06834 288 aa1.03□□□□□ -2.24
CDC39YCR093W POM33Q12164 279 aa1.03□□□□□ -2.24
CDC39YCR093W RPL21BQ12672 160 aaKnown RBP1.03□□□□□ -2.24
CDC39YCR093W GAL3P13045 520 aa1.03□□□□□ -2.24
CDC39YCR093W NIP1P32497 812 aaKnown RBP1.03□□□□□ -2.24
CDC39YCR093W YEL045CP32616 141 aa1.03□□□□□ -2.24
CDC39YCR093W LOS1P33418 1100 aaPredicted RBP1.03□□□□□ -2.24
CDC39YCR093W HEM14P40012 539 aa1.03□□□□□ -2.24
CDC39YCR093W GRX5Q02784 150 aa1.03□□□□□ -2.24
CDC39YCR093W CAB5Q03941 241 aa1.03□□□□□ -2.24
CDC39YCR093W RRG8Q06109 277 aa1.03□□□□□ -2.24
CDC39YCR093W RPL23AP0CX41 137 aaKnown RBP1.03□□□□□ -2.25
CDC39YCR093W RPL23BP0CX42 137 aaKnown RBP1.03□□□□□ -2.25
CDC39YCR093W BGL2P15703 313 aaKnown RBP1.03□□□□□ -2.25
CDC39YCR093W CKA2P19454 339 aa1.03□□□□□ -2.25
CDC39YCR093W ZRC1P20107 442 aa1.03□□□□□ -2.25
CDC39YCR093W MIR1P23641 311 aaKnown RBP1.03□□□□□ -2.25
CDC39YCR093W NTG1P31378 399 aa1.03□□□□□ -2.25
CDC39YCR093W AGA1P32323 725 aa1.03□□□□□ -2.25
CDC39YCR093W MRPS5P33759 307 aa1.03□□□□□ -2.25
CDC39YCR093W PEX32P38292 413 aa1.03□□□□□ -2.25
CDC39YCR093W EFM4P40516 257 aa1.03□□□□□ -2.25
CDC39YCR093W YDR209CQ03480 137 aa1.03□□□□□ -2.25
CDC39YCR093W MDM30Q05930 598 aa1.03□□□□□ -2.25
CDC39YCR093W PBP4Q07362 185 aaKnown RBP1.03□□□□□ -2.25
CDC39YCR093W SEY1Q99287 776 aa1.03□□□□□ -2.25
CDC39YCR093W HIS1P00498 297 aaKnown RBP1.02□□□□□ -2.25
CDC39YCR093W CBP6P07253 162 aaPredicted RBP1.02□□□□□ -2.25
CDC39YCR093W YSW1P38280 609 aa1.02□□□□□ -2.25
CDC39YCR093W AIM10P39965 576 aaKnown RBP1.02□□□□□ -2.25
CDC39YCR093W FMC1P40491 155 aa1.02□□□□□ -2.25
CDC39YCR093W SHE4P51534 789 aa1.02□□□□□ -2.25
CDC39YCR093W CPD1P53314 239 aa1.02□□□□□ -2.25
CDC39YCR093W TAP42Q04372 366 aa1.02□□□□□ -2.25
CDC39YCR093W RSA1Q08932 381 aa1.02□□□□□ -2.25
CDC39YCR093W TMS1Q12116 473 aa1.02□□□□□ -2.25
CDC39YCR093W RKM5Q12367 367 aa1.02□□□□□ -2.25
CDC39YCR093W REV1P12689 985 aa1.02□□□□□ -2.25
CDC39YCR093W UGA1P17649 471 aa1.02□□□□□ -2.25
CDC39YCR093W DPH5P32469 300 aaPredicted RBP1.02□□□□□ -2.25
CDC39YCR093W CYM1P32898 989 aa1.02□□□□□ -2.25
CDC39YCR093W OSW5P40219 148 aa1.02□□□□□ -2.25
CDC39YCR093W IGD1P43598 195 aa1.02□□□□□ -2.25
CDC39YCR093W RMR1P53060 241 aa1.02□□□□□ -2.25
CDC39YCR093W MRX8Q05473 314 aa1.02□□□□□ -2.25
CDC39YCR093W CTR3Q06686 241 aa1.02□□□□□ -2.25
CDC39YCR093W YPR064WQ12492 139 aa1.02□□□□□ -2.25
CDC39YCR093W CAM1P29547 415 aaKnown RBP1.02□□□□□ -2.25
CDC39YCR093W CDC13P32797 924 aaKnown RBP1.02□□□□□ -2.25
CDC39YCR093W GPI16P38875 610 aa1.02□□□□□ -2.25
CDC39YCR093W FET3P38993 636 aa1.02□□□□□ -2.25
CDC39YCR093W SEO1P39709 593 aa1.02□□□□□ -2.25
CDC39YCR093W YER184CP39961 794 aa1.02□□□□□ -2.25
CDC39YCR093W SER3P40054 469 aa1.02□□□□□ -2.25
CDC39YCR093W UTP18P40362 594 aaPredicted RBP1.02□□□□□ -2.25
CDC39YCR093W RPR2P40571 144 aa1.02□□□□□ -2.25
CDC39YCR093W FLC3P53121 802 aa1.02□□□□□ -2.25
CDC39YCR093W VHT1P53241 593 aa1.02□□□□□ -2.25
CDC39YCR093W CRH1P53301 507 aa1.02□□□□□ -2.25
CDC39YCR093W RPL21AQ02753 160 aaKnown RBP1.02□□□□□ -2.25
CDC39YCR093W STE23Q06010 1027 aa1.02□□□□□ -2.25
CDC39YCR093W BMH1P29311 267 aaKnown RBP1.02□□□□□ -2.25
CDC39YCR093W AIM29P36154 155 aa1.02□□□□□ -2.25
CDC39YCR093W YPT35P38815 214 aaKnown RBP1.02□□□□□ -2.25
CDC39YCR093W COX15P40086 486 aa1.02□□□□□ -2.25
CDC39YCR093W SPG5P42933 373 aa1.02□□□□□ -2.25
CDC39YCR093W NNT1Q05874 261 aa1.02□□□□□ -2.25
CDC39YCR093W GMC2Q06201 188 aa1.02□□□□□ -2.25
CDC39YCR093W YLH47Q06493 454 aa1.02□□□□□ -2.25
CDC39YCR093W YDL199CQ12407 687 aa1.02□□□□□ -2.25
CDC39YCR093W IZH2Q12442 317 aa1.02□□□□□ -2.25
Retrieved 100 of 5,963 RNA–protein pairs in 13 ms