RNA–Protein interactions for RNA: YBR279W

PAF1, Transcript of Component of the Paf1p complex involved in transcription elongation, yeastyeast

Gene PAF1, Length 1,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PAF1YBR279W UBX2Q04228 584 aa3.63□□□□□ -1.83
PAF1YBR279W GMC1Q04399 608 aa3.63□□□□□ -1.83
PAF1YBR279W YDR018CQ12185 396 aa3.63□□□□□ -1.83
PAF1YBR279W MSS116P15424 664 aaKnown RBP3.62□□□□□ -1.83
PAF1YBR279W SKG6P32900 734 aaPredicted RBP3.62□□□□□ -1.83
PAF1YBR279W BUD2P33314 1104 aa3.62□□□□□ -1.83
PAF1YBR279W OSW5P40219 148 aa3.62□□□□□ -1.83
PAF1YBR279W FMP48P53233 369 aa3.62□□□□□ -1.83
PAF1YBR279W MDY2Q12285 212 aa3.62□□□□□ -1.83
PAF1YBR279W UTP23Q12339 254 aaKnown RBP3.62□□□□□ -1.83
PAF1YBR279W FLO11P08640 1367 aa3.61□□□□□ -1.83
PAF1YBR279W SAL1D6W196 494 aa3.61□□□□□ -1.83
PAF1YBR279W SPS100P13130 326 aa3.61□□□□□ -1.83
PAF1YBR279W TPS2P31688 896 aaKnown RBP3.61□□□□□ -1.83
PAF1YBR279W TPC1P53257 314 aa3.61□□□□□ -1.83
PAF1YBR279W HST4P53688 370 aa3.61□□□□□ -1.83
PAF1YBR279W YPL080CQ02826 108 aa3.61□□□□□ -1.83
PAF1YBR279W INP2Q03824 705 aa3.61□□□□□ -1.83
PAF1YBR279W VTI1Q04338 217 aa3.61□□□□□ -1.83
PAF1YBR279W VIK1Q12045 647 aa3.61□□□□□ -1.83
PAF1YBR279W IZH4Q99393 312 aa3.61□□□□□ -1.83
PAF1YBR279W INO2P26798 304 aa3.6□□□□□ -1.83
PAF1YBR279W RCK1P38622 512 aa3.6□□□□□ -1.83
PAF1YBR279W MNN9P39107 395 aaKnown RBP3.6□□□□□ -1.83
PAF1YBR279W PES4P39684 611 aa3.6□□□□□ -1.83
PAF1YBR279W YFL040WP43562 540 aa3.6□□□□□ -1.83
PAF1YBR279W OKP1P53298 406 aa3.6□□□□□ -1.83
PAF1YBR279W SNX41Q04053 625 aa3.6□□□□□ -1.83
PAF1YBR279W PAA1Q12447 191 aaKnown RBP3.6□□□□□ -1.83
PAF1YBR279W MRPL20P22354 195 aaPredicted RBP3.59□□□□□ -1.83
PAF1YBR279W IFM1P25038 676 aa3.59□□□□□ -1.83
PAF1YBR279W CYM1P32898 989 aa3.59□□□□□ -1.83
PAF1YBR279W FRM2P37261 193 aa3.59□□□□□ -1.83
PAF1YBR279W COX16P47081 118 aa3.59□□□□□ -1.83
PAF1YBR279W YGR266WP53326 701 aa3.59□□□□□ -1.83
PAF1YBR279W DCP1Q12517 231 aaPredicted RBP3.59□□□□□ -1.83
PAF1YBR279W BI3Q9ZZW7 517 aa3.59□□□□□ -1.83
PAF1YBR279W CAR2P07991 424 aaKnown RBP3.58□□□□□ -1.84
PAF1YBR279W RPL5P26321 297 aaKnown RBP3.58□□□□□ -1.84
PAF1YBR279W ZRT3P34240 503 aa3.58□□□□□ -1.84
PAF1YBR279W YKL162CP36052 402 aa3.58□□□□□ -1.84
PAF1YBR279W YMR262WP38430 313 aa3.58□□□□□ -1.84
PAF1YBR279W FET3P38993 636 aa3.58□□□□□ -1.84
PAF1YBR279W SOP4P39543 234 aaPredicted RBP3.58□□□□□ -1.84
PAF1YBR279W BDH1P39714 382 aa3.58□□□□□ -1.84
PAF1YBR279W SLM1P40485 686 aa3.58□□□□□ -1.84
PAF1YBR279W YGL118CP53132 145 aa3.58□□□□□ -1.84
PAF1YBR279W SWC4P53201 476 aa3.58□□□□□ -1.84
PAF1YBR279W ARP5P53946 755 aa3.58□□□□□ -1.84
PAF1YBR279W ABZ2Q03266 374 aa3.58□□□□□ -1.84
PAF1YBR279W PBP4Q07362 185 aaKnown RBP3.58□□□□□ -1.84
PAF1YBR279W TFC7Q12415 435 aa3.58□□□□□ -1.84
PAF1YBR279W RAD7P06779 565 aa3.57□□□□□ -1.84
PAF1YBR279W DSE1P40077 573 aa3.57□□□□□ -1.84
PAF1YBR279W RRG9P40156 214 aa3.57□□□□□ -1.84
PAF1YBR279W RIB4P50861 169 aaPredicted RBP3.57□□□□□ -1.84
PAF1YBR279W DBP6P53734 629 aaKnown RBP3.57□□□□□ -1.84
PAF1YBR279W YMR244WQ04018 355 aa3.57□□□□□ -1.84
PAF1YBR279W YDL211CQ12121 372 aa3.57□□□□□ -1.84
PAF1YBR279W SIA1Q12212 622 aa3.57□□□□□ -1.84
PAF1YBR279W RRP42Q12277 265 aaPredicted RBP3.57□□□□□ -1.84
PAF1YBR279W TRM10Q12400 293 aa3.57□□□□□ -1.84
PAF1YBR279W DFM1Q12743 341 aaKnown RBP3.57□□□□□ -1.84
PAF1YBR279W COX10P21592 462 aa3.56□□□□□ -1.84
PAF1YBR279W RPL16BP26785 198 aaKnown RBP3.56□□□□□ -1.84
PAF1YBR279W PFS2P42841 465 aaKnown RBP3.56□□□□□ -1.84
PAF1YBR279W YNR066CP53752 436 aa3.56□□□□□ -1.84
PAF1YBR279W RRG8Q06109 277 aa3.56□□□□□ -1.84
PAF1YBR279W DIB1Q06819 143 aaPredicted RBP3.56□□□□□ -1.84
PAF1YBR279W PRM7Q12459 698 aa3.56□□□□□ -1.84
PAF1YBR279W YIL002W-AQ3E7Z5 69 aa3.56□□□□□ -1.84
PAF1YBR279W LAG2Q92325 660 aa3.56□□□□□ -1.84
PAF1YBR279W TDH3P00359 332 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
PAF1YBR279W CUP2P15315 225 aa3.55□□□□□ -1.84
PAF1YBR279W CPT1P17898 393 aa3.55□□□□□ -1.84
PAF1YBR279W RPC25P35718 212 aa3.55□□□□□ -1.84
PAF1YBR279W MCH2P36032 473 aa3.55□□□□□ -1.84
PAF1YBR279W SWD2P36104 329 aaPredicted RBP3.55□□□□□ -1.84
PAF1YBR279W CDC40P40968 455 aaPredicted RBP3.55□□□□□ -1.84
PAF1YBR279W ASG7P46993 209 aa3.55□□□□□ -1.84
PAF1YBR279W CAX4P53223 239 aa3.55□□□□□ -1.84
PAF1YBR279W CUR1Q06469 252 aa3.55□□□□□ -1.84
PAF1YBR279W VAC14Q06708 880 aa3.55□□□□□ -1.84
PAF1YBR279W MRPL6P32904 214 aa3.54□□□□□ -1.84
PAF1YBR279W CSE1P33307 960 aa3.54□□□□□ -1.84
PAF1YBR279W AST1P35183 429 aa3.54□□□□□ -1.84
PAF1YBR279W TDA11P38854 504 aa3.54□□□□□ -1.84
PAF1YBR279W PET8P38921 284 aa3.54□□□□□ -1.84
PAF1YBR279W KEL2P50090 882 aa3.54□□□□□ -1.84
PAF1YBR279W ZRG17P53735 605 aa3.54□□□□□ -1.84
PAF1YBR279W APJ1P53940 528 aa3.54□□□□□ -1.84
PAF1YBR279W SMD1Q02260 146 aaPredicted RBP3.54□□□□□ -1.84
PAF1YBR279W ECM19Q06011 112 aa3.54□□□□□ -1.84
PAF1YBR279W MIM1Q08176 113 aa3.54□□□□□ -1.84
PAF1YBR279W ASP1P38986 381 aaPredicted RBP3.53□□□□□ -1.84
PAF1YBR279W ARC18Q05933 178 aaKnown RBP3.53□□□□□ -1.84
PAF1YBR279W YLR446WQ06204 433 aa3.53□□□□□ -1.84
PAF1YBR279W YPR195CQ06594 109 aa3.53□□□□□ -1.84
PAF1YBR279W AIM29P36154 155 aa3.52□□□□□ -1.85
PAF1YBR279W LOC1P43586 204 aaPredicted RBP3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms