RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 CTNNA2P26232 953 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 ABL2P42684 1182 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 TOB1P50616 345 aaPredicted RBP6.08□□□□□ -1.44
SCARB2-218ENST00000639715 CYP27A1Q02318 531 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 DHX9Q08211 1270 aaKnown RBP6.08□□□□□ -1.44
SCARB2-218ENST00000639715 TAOK1Q7L7X3 1001 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 TSEN2Q8NCE0 465 aaKnown RBP6.08□□□□□ -1.44
SCARB2-218ENST00000639715 SUPT20HQ8NEM7 779 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 OR2W6PQ8NHA6 318 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 UHMK1Q8TAS1 419 aaKnown RBP6.08□□□□□ -1.44
SCARB2-218ENST00000639715 SH3RF3Q8TEJ3 882 aaPredicted RBP6.08□□□□□ -1.44
SCARB2-218ENST00000639715 MPP4Q96JB8 637 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 DHRS1Q96LJ7 313 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 DHX36Q9H2U1 1008 aaKnown RBP6.08□□□□□ -1.44
SCARB2-218ENST00000639715 EMILIN3Q9NT22 766 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 TRIM10Q9UDY6 481 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 ARIH1Q9Y4X5 557 aaPredicted RBP6.08□□□□□ -1.44
SCARB2-218ENST00000639715 SLIT3O75094 1523 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 NFAT5O94916 1531 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 A0A1W2PRG0 241 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 TCRBV5S4A2TA0A5A2 114 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 TRIM49BA6NDI0 452 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 KRIT1O00522 736 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 SPOPO43791 374 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 NMT2O60551 498 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 ATP9AO75110 1047 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 LCA5LO95447 670 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 AFPP02771 609 aaKnown RBP6.08□□□□□ -1.44
SCARB2-218ENST00000639715 ZNF18P17022 549 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 LMNB1P20700 586 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 ATP6V1C1P21283 382 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 COPS2P61201 443 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 EZH2Q15910 746 aaKnown RBP6.08□□□□□ -1.44
SCARB2-218ENST00000639715 PPP1R21Q6ZMI0 780 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 ANO5Q75V66 913 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 ANKRD13CQ8N6S4 541 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 MDM1Q8TC05 714 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 GFM2Q969S9 779 aaKnown RBP6.08□□□□□ -1.44
SCARB2-218ENST00000639715 C7orf25Q9BPX7 421 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 IMPG2Q9BZV3 1241 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 PCDH18Q9HCL0 1135 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 NKIRAS1Q9NYS0 192 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 KIF1AQ12756 1690 aa6.08□□□□□ -1.44
SCARB2-218ENST00000639715 PDS5AQ29RF7 1337 aaKnown RBP6.07□□□□□ -1.44
SCARB2-218ENST00000639715 POTEFA5A3E0 1075 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 FAM205CA6NFA0 338 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 PPP1R3GB7ZBB8 358 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 FANCGO15287 622 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 GAS7O60861 476 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 SRGNP10124 158 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 ACADSP16219 412 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 CARSP49589 748 aaKnown RBP6.07□□□□□ -1.44
SCARB2-218ENST00000639715 PEX5P50542 639 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 ITGA7Q13683 1181 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 CDC37Q16543 378 aaPredicted RBP6.07□□□□□ -1.44
SCARB2-218ENST00000639715 TXNRD1Q16881 649 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 ZCWPW2Q504Y3 356 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 RC3H1Q5TC82 1133 aaKnown RBP6.07□□□□□ -1.44
SCARB2-218ENST00000639715 FAAH2Q6GMR7 532 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 KRT26Q7Z3Y9 468 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 SCYL3Q8IZE3 742 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 U2AF1L4Q8WU68 220 aaKnown RBP6.07□□□□□ -1.44
SCARB2-218ENST00000639715 BHMTQ93088 406 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 SYT15Q9BQS2 421 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 OSBPL10Q9BXB5 764 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 TRIM9Q9C026 710 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 ARHGEF38Q9NXL2 777 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 CEP72Q9P209 647 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 PNMA2Q9UL42 364 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 LRCH1Q9Y2L9 728 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 SHANK3Q9BYB0 1731 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 FAM208AQ9UK61 1670 aaKnown RBP6.07□□□□□ -1.44
SCARB2-218ENST00000639715 THSD7AQ9UPZ6 1657 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 CNTNAP5Q8WYK1 1306 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 A0A0U1RQJ8 604 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 A6NHS1 94 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 SLC26A4O43511 780 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 TRAPPC3O43617 180 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 PLA2G4BP0C869 781 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 STX2P32856 288 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 SARSP49591 514 aaKnown RBP6.07□□□□□ -1.44
SCARB2-218ENST00000639715 FXR1P51114 621 aaKnown RBP eCLIP6.07□□□□□ -1.44
SCARB2-218ENST00000639715 EHHADHQ08426 723 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 AP3B2Q13367 1082 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 SEC23AQ15436 765 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 TRIM67Q6ZTA4 783 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 TRAPPC11Q7Z392 1133 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 SESTD1Q86VW0 696 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 GPIHBP1Q8IV16 184 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 PEX5LQ8IYB4 626 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 GIMAP8Q8ND71 665 aaPredicted RBP6.07□□□□□ -1.44
SCARB2-218ENST00000639715 FLAD1Q8NFF5 587 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 DTX3LQ8TDB6 740 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 PIGOQ8TEQ8 1089 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 AENQ8WTP8 325 aaKnown RBP6.07□□□□□ -1.44
SCARB2-218ENST00000639715 COA7Q96BR5 231 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 CORO1BQ9BR76 489 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 COA1Q9GZY4 146 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 USP21Q9UK80 565 aa6.07□□□□□ -1.44
SCARB2-218ENST00000639715 PCDHA6Q9UN73 950 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms