RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 CCDC38Q502W7 563 aa15.45■□□□□ 0.06
SCARB2-216ENST00000639300 PRAMEF18Q5VWM3 479 aa15.45■□□□□ 0.06
SCARB2-216ENST00000639300 FAM47EQ6ZV65 393 aa15.45■□□□□ 0.06
SCARB2-216ENST00000639300 SRRM1Q8IYB3 904 aaKnown RBP15.45■□□□□ 0.06
SCARB2-216ENST00000639300 CHORDC1Q9UHD1 332 aaPredicted RBP15.45■□□□□ 0.06
SCARB2-216ENST00000639300 RIMBP3CA6NJZ7 1639 aa15.45■□□□□ 0.06
SCARB2-216ENST00000639300 RIMBP3BA6NNM3 1639 aa15.45■□□□□ 0.06
SCARB2-216ENST00000639300 RIMBP3Q9UFD9 1639 aa15.45■□□□□ 0.06
SCARB2-216ENST00000639300 SLIT1O75093 1534 aa15.45■□□□□ 0.06
SCARB2-216ENST00000639300 LDHAP00338 332 aaKnown RBP15.45■□□□□ 0.06
SCARB2-216ENST00000639300 MT-ND3P03897 115 aa15.45■□□□□ 0.06
SCARB2-216ENST00000639300 RPSAP08865 295 aaKnown RBP15.45■□□□□ 0.06
SCARB2-216ENST00000639300 YWHABP31946 246 aaKnown RBP15.45■□□□□ 0.06
SCARB2-216ENST00000639300 GJB7Q6PEY0 223 aa15.45■□□□□ 0.06
SCARB2-216ENST00000639300 CCDC137Q6PK04 289 aaKnown RBP15.45■□□□□ 0.06
SCARB2-216ENST00000639300 SPC25Q9HBM1 224 aa15.45■□□□□ 0.06
SCARB2-216ENST00000639300 A0A087X0B3 334 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 PRPSAP2O60256 369 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 BAG2O95816 211 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 SFNP31947 248 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 PPM1FP49593 454 aaPredicted RBP15.44■□□□□ 0.06
SCARB2-216ENST00000639300 GUCY1A3Q02108 690 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 ADCY2Q08462 1091 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 EDRF1Q3B7T1 1238 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 PPP4R1Q8TF05 950 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 HSPH1Q92598 858 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 AGPAT1Q99943 283 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 RPAP3Q9H6T3 665 aaPredicted RBP15.44■□□□□ 0.06
SCARB2-216ENST00000639300 TUFT1Q9NNX1 390 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 A0A087X0T9 212 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 FAM228BP0C875 321 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 HDLBPQ00341 1268 aaKnown RBP15.44■□□□□ 0.06
SCARB2-216ENST00000639300 DDX42Q86XP3 938 aaKnown RBP eCLIP15.44■□□□□ 0.06
SCARB2-216ENST00000639300 SCYL3Q8IZE3 742 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 CFAP61Q8NHU2 1237 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 CCT6BQ92526 530 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 IL17RBQ9NRM6 502 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 SCINQ9Y6U3 715 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 RSPH10B2B2RC85 870 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 PSMD14O00487 310 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 TTI1O43156 1089 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 MED7O43513 233 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 KRT14P02533 472 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 RSPH10BP0C881 870 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 CARSP49589 748 aaKnown RBP15.44■□□□□ 0.06
SCARB2-216ENST00000639300 NPEPPSP55786 919 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 RCN2Q14257 317 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 VGLL2Q8N8G2 317 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 NSMCE1Q8WV22 266 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 POLR3FQ9H1D9 316 aaPredicted RBP15.44■□□□□ 0.06
SCARB2-216ENST00000639300 GINM1Q9NU53 330 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 TARSL2A2RTX5 802 aaKnown RBP15.44■□□□□ 0.06
SCARB2-216ENST00000639300 CYP11B2P19099 503 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 PMS1P54277 932 aaKnown RBP15.44■□□□□ 0.06
SCARB2-216ENST00000639300 MTMR2Q13614 643 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 PNKPQ96T60 521 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 TMEM39BQ9GZU3 492 aa15.44■□□□□ 0.06
SCARB2-216ENST00000639300 GIPC1O14908 333 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 ACOT2P49753 483 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 IRX4P78413 519 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 ITKQ08881 620 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 SNCBQ16143 134 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 SLC35G2Q8TBE7 412 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 SLC38A10Q9HBR0 1119 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 GRID2IPA4D2P6 1211 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 PMS2P54278 862 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 ZNF568Q3ZCX4 644 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 CDKAL1Q5VV42 579 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 PLA2G4FQ68DD2 849 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 NXNQ6DKJ4 435 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 ACER1Q8TDN7 264 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 PSPC1Q8WXF1 523 aaKnown RBP15.43■□□□□ 0.06
SCARB2-216ENST00000639300 RPS6KC1Q96S38 1066 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 STK33Q9BYT3 514 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 KIAA1586Q9HCI6 787 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 APEX2Q9UBZ4 518 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.43■□□□□ 0.06
SCARB2-216ENST00000639300 TBX3O15119 743 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 SMARCA1P28370 1054 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 SLC30A10Q6XR72 485 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 TBC1D1Q86TI0 1168 aaPredicted RBP15.43■□□□□ 0.06
SCARB2-216ENST00000639300 AGBL1Q96MI9 1066 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 TRIM51Q9BSJ1 452 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 RTFDC1Q9BY42 306 aaPredicted RBP15.43■□□□□ 0.06
SCARB2-216ENST00000639300 SNX25Q9H3E2 840 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 VCPKMTQ9H867 229 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 RBAKQ9NYW8 714 aaPredicted RBP15.43■□□□□ 0.06
SCARB2-216ENST00000639300 HSPBP1Q9NZL4 362 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 DIS3Q9Y2L1 958 aaKnown RBP15.43■□□□□ 0.06
SCARB2-216ENST00000639300 CPP00450 1065 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 GABPAQ06546 454 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 PDZD4Q76G19 769 aaPredicted RBP15.43■□□□□ 0.06
SCARB2-216ENST00000639300 CCDC117Q8IWD4 279 aaPredicted RBP15.43■□□□□ 0.06
SCARB2-216ENST00000639300 DNAAF3Q8N9W5 541 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 LRRN4CLQ8ND94 238 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 GABPB2Q8TAK5 448 aaPredicted RBP15.43■□□□□ 0.06
SCARB2-216ENST00000639300 CDKL2Q92772 493 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 ZNF302Q9NR11 478 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 SMYD2Q9NRG4 433 aa15.43■□□□□ 0.06
SCARB2-216ENST00000639300 AGO2Q9UKV8 859 aaKnown RBP15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms