RNA–Protein interactions for RNA: ENST00000638940.1

SPIN3-216, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,785 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-216ENST00000638940 SPDYE16A6NNV3 312 aaPredicted RBP11.56□□□□□ -0.56
SPIN3-216ENST00000638940 PALMO75781 387 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 KIF22Q14807 665 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 R3HDM1Q15032 1099 aaKnown RBP11.56□□□□□ -0.56
SPIN3-216ENST00000638940 CFAP221Q4G0U5 840 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 EPC2Q52LR7 807 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 ANO5Q75V66 913 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 MCPH1Q8NEM0 835 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 SPATA4Q8NEY3 305 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 OLIG1Q8TAK6 271 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 COG1Q8WTW3 980 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 GPR88Q9GZN0 384 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 A1CFQ9NQ94 594 aaKnown RBP11.56□□□□□ -0.56
SPIN3-216ENST00000638940 PFASO15067 1338 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 BUB1O43683 1085 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 EVI5O60447 810 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 USP2O75604 605 aaPredicted RBP11.56□□□□□ -0.56
SPIN3-216ENST00000638940 EIF3JO75822 258 aaKnown RBP11.56□□□□□ -0.56
SPIN3-216ENST00000638940 RGS20O76081 388 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 MYCNP04198 464 aaPredicted RBP11.56□□□□□ -0.56
SPIN3-216ENST00000638940 H2AFZP0C0S5 128 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 TNFRSF8P28908 595 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 HIRAP54198 1017 aaPredicted RBP11.56□□□□□ -0.56
SPIN3-216ENST00000638940 GPS2Q13227 327 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 DRAP1Q14919 205 aaPredicted RBP11.56□□□□□ -0.56
SPIN3-216ENST00000638940 NFRKBQ6P4R8 1299 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 H2AFVQ71UI9 128 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 ANKRD13CQ8N6S4 541 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 TMEM161BQ8NDZ6 487 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 SLC9A2Q9UBY0 812 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 FBXO40Q9UH90 709 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 TBX20Q9UMR3 447 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 NCANO14594 1321 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 DDX3XO00571 662 aaKnown RBP eCLIP11.56□□□□□ -0.56
SPIN3-216ENST00000638940 DGAT1O75907 488 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 NAP1L1P55209 391 aaKnown RBP11.56□□□□□ -0.56
SPIN3-216ENST00000638940 PEX3P56589 373 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 DMP1Q13316 513 aaPredicted RBP11.56□□□□□ -0.56
SPIN3-216ENST00000638940 CCDC181Q5TID7 509 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 ABHD15Q6UXT9 468 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 SLFN11Q7Z7L1 901 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 TMC2Q8TDI7 906 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 ACBD3Q9H3P7 528 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 JPH1Q9HDC5 661 aaPredicted RBP11.56□□□□□ -0.56
SPIN3-216ENST00000638940 ST7Q9NRC1 585 aa11.56□□□□□ -0.56
SPIN3-216ENST00000638940 SIP14410 1827 aa11.55□□□□□ -0.56
SPIN3-216ENST00000638940 ATG7O95352 703 aa11.55□□□□□ -0.56
SPIN3-216ENST00000638940 TRIM49P0CI25 452 aa11.55□□□□□ -0.56
SPIN3-216ENST00000638940 TRIM49CP0CI26 452 aa11.55□□□□□ -0.56
SPIN3-216ENST00000638940 GTF2H1P32780 548 aa11.55□□□□□ -0.56
SPIN3-216ENST00000638940 SMC1AQ14683 1233 aaKnown RBP11.55□□□□□ -0.56
SPIN3-216ENST00000638940 TCEAL1Q15170 157 aa11.55□□□□□ -0.56
SPIN3-216ENST00000638940 MIS18BP1Q6P0N0 1132 aa11.55□□□□□ -0.56
SPIN3-216ENST00000638940 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.55□□□□□ -0.56
SPIN3-216ENST00000638940 SYCE1Q8N0S2 351 aa11.55□□□□□ -0.56
SPIN3-216ENST00000638940 LRRC57Q8N9N7 239 aa11.55□□□□□ -0.56
SPIN3-216ENST00000638940 PBKQ96KB5 322 aa11.55□□□□□ -0.56
SPIN3-216ENST00000638940 FBXL18Q96ME1 805 aa11.55□□□□□ -0.56
SPIN3-216ENST00000638940 PACSIN1Q9BY11 444 aa11.55□□□□□ -0.56
SPIN3-216ENST00000638940 GABBR1Q9UBS5 961 aa11.55□□□□□ -0.56
SPIN3-216ENST00000638940 POLR2AP24928 1970 aaKnown RBP11.55□□□□□ -0.56
SPIN3-216ENST00000638940 OTOFQ9HC10 1997 aa11.55□□□□□ -0.56
SPIN3-216ENST00000638940 IGSF9BQ9UPX0 1349 aa11.55□□□□□ -0.56
SPIN3-216ENST00000638940 SLC16A4O15374 487 aa11.55□□□□□ -0.56
SPIN3-216ENST00000638940 TMEM253P0C7T8 217 aa11.55□□□□□ -0.56
SPIN3-216ENST00000638940 NPTX2P47972 431 aa11.55□□□□□ -0.56
SPIN3-216ENST00000638940 C1orf220Q5T0J3 134 aa11.55□□□□□ -0.56
SPIN3-216ENST00000638940 FAM102BQ5T8I3 360 aa11.55□□□□□ -0.56
SPIN3-216ENST00000638940 GJB7Q6PEY0 223 aa11.55□□□□□ -0.56
SPIN3-216ENST00000638940 CCNI2Q6ZMN8 369 aaPredicted RBP11.55□□□□□ -0.56
SPIN3-216ENST00000638940 MAEAQ7L5Y9 396 aa11.55□□□□□ -0.56
SPIN3-216ENST00000638940 CBWD1Q9BRT8 395 aa11.55□□□□□ -0.56
SPIN3-216ENST00000638940 SNCAIPQ9Y6H5 919 aa11.55□□□□□ -0.56
SPIN3-216ENST00000638940 MYH9P35579 1960 aaKnown RBP11.54□□□□□ -0.56
SPIN3-216ENST00000638940 EMSYQ7Z589 1322 aa11.54□□□□□ -0.56
SPIN3-216ENST00000638940 ZNF862O60290 1169 aa11.54□□□□□ -0.56
SPIN3-216ENST00000638940 CLSTN1O94985 981 aa11.54□□□□□ -0.56
SPIN3-216ENST00000638940 TERF2Q15554 542 aa11.54□□□□□ -0.56
SPIN3-216ENST00000638940 STXBP2Q15833 593 aa11.54□□□□□ -0.56
SPIN3-216ENST00000638940 XKR3Q5GH77 459 aa11.54□□□□□ -0.56
SPIN3-216ENST00000638940 LBX2Q6XYB7 198 aa11.54□□□□□ -0.56
SPIN3-216ENST00000638940 USP37Q86T82 979 aa11.54□□□□□ -0.56
SPIN3-216ENST00000638940 RIOX2Q8IUF8 465 aa11.54□□□□□ -0.56
SPIN3-216ENST00000638940 LNX1Q8TBB1 728 aaPredicted RBP11.54□□□□□ -0.56
SPIN3-216ENST00000638940 KMT5AQ9NQR1 393 aa11.54□□□□□ -0.56
SPIN3-216ENST00000638940 COQ4Q9Y3A0 265 aa11.54□□□□□ -0.56
SPIN3-216ENST00000638940 SUPT20HL2P0C7V6 817 aa11.54□□□□□ -0.56
SPIN3-216ENST00000638940 GARTP22102 1010 aa11.54□□□□□ -0.56
SPIN3-216ENST00000638940 ACTR2P61160 394 aa11.54□□□□□ -0.56
SPIN3-216ENST00000638940 C2orf54Q08AI8 447 aa11.54□□□□□ -0.56
SPIN3-216ENST00000638940 PLS1Q14651 629 aa11.54□□□□□ -0.56
SPIN3-216ENST00000638940 CASP8Q14790 479 aa11.54□□□□□ -0.56
SPIN3-216ENST00000638940 PRAMEF18Q5VWM3 479 aa11.54□□□□□ -0.56
SPIN3-216ENST00000638940 PLA2G4FQ68DD2 849 aa11.54□□□□□ -0.56
SPIN3-216ENST00000638940 PHLDB3Q6NSJ2 640 aa11.54□□□□□ -0.56
SPIN3-216ENST00000638940 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.54□□□□□ -0.56
SPIN3-216ENST00000638940 GPIHBP1Q8IV16 184 aa11.54□□□□□ -0.56
SPIN3-216ENST00000638940 NLGN2Q8NFZ4 835 aa11.54□□□□□ -0.56
SPIN3-216ENST00000638940 TPCN2Q8NHX9 752 aa11.54□□□□□ -0.56
SPIN3-216ENST00000638940 CEP170P1Q96L14 293 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms