RNA–Protein interactions for RNA: ENST00000637774.1

CACNA1A-248, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,381 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-248ENST00000637774 SLC10A4Q96EP9 437 aa10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 ZCCHC17Q9NP64 241 aaKnown RBP10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 PNMA2Q9UL42 364 aa10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 ANKRD63C9JTQ0 380 aa10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 DKC1O60832 514 aaKnown RBP eCLIP10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 CYP2C8P10632 490 aa10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 GPS2Q13227 327 aa10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 HLTFQ14527 1009 aaKnown RBP eCLIP10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 INTS8Q75QN2 995 aaKnown RBP10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 EPM2AIP1Q7L775 607 aaPredicted RBP10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 PEX26Q7Z412 305 aa10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 BTBD7Q9P203 1132 aa10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 CTTNBP2NLQ9P2B4 639 aa10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 AJAP1Q9UKB5 411 aaPredicted RBP10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 K7ERI5 159 aa10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 FOXN3O00409 490 aaPredicted RBP10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 MYCNP04198 464 aaPredicted RBP10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 MAPK7Q13164 816 aa10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 RPS6KA1Q15418 735 aa10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 SNRNP35Q16560 246 aaKnown RBP10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 EPC2Q52LR7 807 aa10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 C4orf19Q8IY42 314 aa10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 LRRC71Q8N4P6 559 aa10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 UPF1Q92900 1129 aaKnown RBP eCLIP10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 OSBPL9Q96SU4 736 aa10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 SPATC1LQ9H0A9 340 aa10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 ATP6V0A4Q9HBG4 840 aa10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 DDX41Q9UJV9 622 aaKnown RBP10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 AFG3L2Q9Y4W6 797 aa10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 SNCAIPQ9Y6H5 919 aa10.51□□□□□ -0.73
CACNA1A-248ENST00000637774 SSU72P8A0A1W2PR75 194 aa10.5□□□□□ -0.73
CACNA1A-248ENST00000637774 SLC26A4O43511 780 aa10.5□□□□□ -0.73
CACNA1A-248ENST00000637774 CCDC172P0C7W6 258 aa10.5□□□□□ -0.73
CACNA1A-248ENST00000637774 GYS2P54840 703 aa10.5□□□□□ -0.73
CACNA1A-248ENST00000637774 HGSNATQ68CP4 663 aa10.5□□□□□ -0.73
CACNA1A-248ENST00000637774 CC2D1AQ6P1N0 951 aaPredicted RBP10.5□□□□□ -0.73
CACNA1A-248ENST00000637774 GPRASP2Q96D09 838 aa10.5□□□□□ -0.73
CACNA1A-248ENST00000637774 NLRP4Q96MN2 994 aa10.5□□□□□ -0.73
CACNA1A-248ENST00000637774 IWS1Q96ST2 819 aa10.5□□□□□ -0.73
CACNA1A-248ENST00000637774 ASCC2Q9H1I8 757 aaPredicted RBP10.5□□□□□ -0.73
CACNA1A-248ENST00000637774 TBX20Q9UMR3 447 aa10.5□□□□□ -0.73
CACNA1A-248ENST00000637774 SLC16A3O15427 465 aaKnown RBP10.5□□□□□ -0.73
CACNA1A-248ENST00000637774 CALCAP01258 141 aa10.5□□□□□ -0.73
CACNA1A-248ENST00000637774 FERP16591 822 aa10.5□□□□□ -0.73
CACNA1A-248ENST00000637774 EPHX2P34913 555 aa10.5□□□□□ -0.73
CACNA1A-248ENST00000637774 PPP3CAQ08209 521 aa10.5□□□□□ -0.73
CACNA1A-248ENST00000637774 OPTNQ96CV9 577 aa10.5□□□□□ -0.73
CACNA1A-248ENST00000637774 GANQ9H2C0 597 aa10.5□□□□□ -0.73
CACNA1A-248ENST00000637774 R3HDMLQ9H3Y0 253 aa10.5□□□□□ -0.73
CACNA1A-248ENST00000637774 CYP26B1Q9NR63 512 aa10.5□□□□□ -0.73
CACNA1A-248ENST00000637774 ZNF446Q9NWS9 450 aa10.5□□□□□ -0.73
CACNA1A-248ENST00000637774 KCND2Q9NZV8 630 aa10.5□□□□□ -0.73
CACNA1A-248ENST00000637774 PDE2AO00408 941 aaPredicted RBP10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 CSDE1O75534 798 aaKnown RBP10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 GJC1P36383 396 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 SP2Q02086 613 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 GJC2Q5T442 439 aaPredicted RBP10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 TRAPPC11Q7Z392 1133 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 FBXO16Q8IX29 292 aaPredicted RBP10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 ANKRD13AQ8IZ07 590 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 GOLGA6L1Q8N7Z2 621 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 BSNDQ8WZ55 320 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 EDEM3Q9BZQ6 932 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 TRIM31Q9BZY9 425 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 CENPHQ9H3R5 247 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 GINM1Q9NU53 330 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 APEX2Q9UBZ4 518 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 ESYT3A0FGR9 886 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 INO80B-WBP1J3KQ70 363 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 FECHP22830 423 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 HOXA7P31268 230 aaPredicted RBP10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 SOX5P35711 763 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 STAT5BP51692 787 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 TUBB2AQ13885 445 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 C8orf74Q6P047 294 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 DPH6Q7L8W6 267 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 PPP1R13LQ8WUF5 828 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 ZBTB10Q96DT7 871 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 ZBTB45Q96K62 511 aaPredicted RBP10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 TUBB2BQ9BVA1 445 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 TARS2Q9BW92 718 aaKnown RBP10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 AP1M1Q9BXS5 423 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 INO80BQ9C086 356 aaPredicted RBP10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 NAGPAQ9UK23 515 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 SNX12Q9UMY4 172 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 IVNS1ABPQ9Y6Y0 642 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 CYP26A1O43174 497 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 EIF3JO75822 258 aaKnown RBP10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 DGAT1O75907 488 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 TCP1P17987 556 aaKnown RBP10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 CFAP221Q4G0U5 840 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 ARMC9Q7Z3E5 817 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 MCPH1Q8NEM0 835 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 COPS5Q92905 334 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 CDCA5Q96FF9 252 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 INPP4AQ96PE3 977 aaPredicted RBP10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 EFCC1Q9HA90 598 aa10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 BZW2Q9Y6E2 419 aaKnown RBP10.49□□□□□ -0.73
CACNA1A-248ENST00000637774 RGS20O76081 388 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms