RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 AGPAT5Q9NUQ2 364 aa21.12■□□□□ 0.97
CLN6-221ENST00000637494 FAM105AQ9NUU6 356 aa21.12■□□□□ 0.97
CLN6-221ENST00000637494 RNF19AQ9NV58 838 aa21.12■□□□□ 0.97
CLN6-221ENST00000637494 SPG21Q9NZD8 308 aa21.12■□□□□ 0.97
CLN6-221ENST00000637494 HCSTQ9UBK5 93 aa21.12■□□□□ 0.97
CLN6-221ENST00000637494 ZBTB39O15060 712 aa21.11■□□□□ 0.97
CLN6-221ENST00000637494 SRGAP2BP0DMP2 458 aa21.11■□□□□ 0.97
CLN6-221ENST00000637494 XRCC6P12956 609 aaKnown RBP eCLIP21.11■□□□□ 0.97
CLN6-221ENST00000637494 ALDH7A1P49419 539 aaKnown RBP21.11■□□□□ 0.97
CLN6-221ENST00000637494 PCBP1Q15365 356 aaKnown RBP eCLIP21.11■□□□□ 0.97
CLN6-221ENST00000637494 LRRC55Q6ZSA7 311 aa21.11■□□□□ 0.97
CLN6-221ENST00000637494 CDCA3Q99618 268 aaPredicted RBP21.11■□□□□ 0.97
CLN6-221ENST00000637494 KIF2CQ99661 725 aa21.11■□□□□ 0.97
CLN6-221ENST00000637494 ENTPD7Q9NQZ7 604 aa21.11■□□□□ 0.97
CLN6-221ENST00000637494 PRKAG3Q9UGI9 489 aa21.11■□□□□ 0.97
CLN6-221ENST00000637494 CD207Q9UJ71 328 aa21.11■□□□□ 0.97
CLN6-221ENST00000637494 XIRP2A4UGR9 3374 aa21.1■□□□□ 0.97
CLN6-221ENST00000637494 POTEMA6NI47 508 aa21.1■□□□□ 0.97
CLN6-221ENST00000637494 WNT7AO00755 349 aa21.1■□□□□ 0.97
CLN6-221ENST00000637494 OR52Z1P0C646 297 aa21.1■□□□□ 0.97
CLN6-221ENST00000637494 GTF2F1P35269 517 aaKnown RBP eCLIP21.1■□□□□ 0.971e-6■■■■□ 26
CLN6-221ENST00000637494 LTBRP36941 435 aa21.1■□□□□ 0.97
CLN6-221ENST00000637494 TRAPPC10P48553 1259 aa21.1■□□□□ 0.97
CLN6-221ENST00000637494 RNASELQ05823 741 aaKnown RBP21.1■□□□□ 0.97
CLN6-221ENST00000637494 ZNF174Q15697 407 aa21.1■□□□□ 0.97
CLN6-221ENST00000637494 CLUL1Q15846 466 aa21.1■□□□□ 0.97
CLN6-221ENST00000637494 ADGRD2Q7Z7M1 963 aa21.1■□□□□ 0.97
CLN6-221ENST00000637494 NOSTRINQ8IVI9 506 aa21.1■□□□□ 0.97
CLN6-221ENST00000637494 GJD3Q8N144 294 aa21.1■□□□□ 0.97
CLN6-221ENST00000637494 TMEM60Q9H2L4 133 aa21.1■□□□□ 0.97
CLN6-221ENST00000637494 TUFT1Q9NNX1 390 aa21.1■□□□□ 0.97
CLN6-221ENST00000637494 NGRNQ9NPE2 291 aaKnown RBP21.1■□□□□ 0.97
CLN6-221ENST00000637494 PLXNA4Q9HCM2 1894 aa21.09■□□□□ 0.97
CLN6-221ENST00000637494 ZNF623O75123 536 aa21.09■□□□□ 0.97
CLN6-221ENST00000637494 ATF7P17544 494 aaPredicted RBP21.09■□□□□ 0.97
CLN6-221ENST00000637494 TECP42680 631 aa21.09■□□□□ 0.97
CLN6-221ENST00000637494 TTC38Q5R3I4 469 aa21.09■□□□□ 0.97
CLN6-221ENST00000637494 URGCPQ8TCY9 931 aa21.09■□□□□ 0.97
CLN6-221ENST00000637494 INPP5FQ9Y2H2 1132 aa21.09■□□□□ 0.97
CLN6-221ENST00000637494 ATG2AQ2TAZ0 1938 aa21.09■□□□□ 0.97
CLN6-221ENST00000637494 SPTBN5Q9NRC6 3674 aaKnown RBP21.09■□□□□ 0.97
CLN6-221ENST00000637494 TTC28Q96AY4 2481 aa21.09■□□□□ 0.97
CLN6-221ENST00000637494 ARID2Q68CP9 1835 aa21.08■□□□□ 0.97
CLN6-221ENST00000637494 LINC01565O15544 149 aa21.08■□□□□ 0.97
CLN6-221ENST00000637494 AXLP30530 894 aa21.08■□□□□ 0.97
CLN6-221ENST00000637494 RARRES1P49788 294 aa21.08■□□□□ 0.97
CLN6-221ENST00000637494 ERVFC1P60507 584 aa21.08■□□□□ 0.97
CLN6-221ENST00000637494 POU5F1BQ06416 359 aa21.08■□□□□ 0.97
CLN6-221ENST00000637494 SMAD4Q13485 552 aaKnown RBP21.08■□□□□ 0.97
CLN6-221ENST00000637494 LONRF3Q496Y0 759 aa21.08■□□□□ 0.97
CLN6-221ENST00000637494 NOMO2Q5JPE7 1267 aa21.08■□□□□ 0.97
CLN6-221ENST00000637494 PLPP4Q5VZY2 271 aa21.08■□□□□ 0.97
CLN6-221ENST00000637494 HAUS3Q68CZ6 603 aa21.08■□□□□ 0.97
CLN6-221ENST00000637494 TMC7Q7Z402 723 aa21.08■□□□□ 0.97
CLN6-221ENST00000637494 CNNM3Q8NE01 707 aa21.08■□□□□ 0.97
CLN6-221ENST00000637494 PIGOQ8TEQ8 1089 aa21.08■□□□□ 0.97
CLN6-221ENST00000637494 LPPQ93052 612 aa21.08■□□□□ 0.97
CLN6-221ENST00000637494 TMEM169Q96HH4 297 aa21.08■□□□□ 0.97
CLN6-221ENST00000637494 NACC1Q96RE7 527 aa21.08■□□□□ 0.97
CLN6-221ENST00000637494 POP1Q99575 1024 aaKnown RBP21.08■□□□□ 0.97
CLN6-221ENST00000637494 TCF25Q9BQ70 676 aa21.08■□□□□ 0.97
CLN6-221ENST00000637494 PCDHB2Q9Y5E7 798 aa21.08■□□□□ 0.97
CLN6-221ENST00000637494 CNTNAP2Q9UHC6 1331 aa21.07■□□□□ 0.96
CLN6-221ENST00000637494 INO80B-WBP1J3KQ70 363 aa21.07■□□□□ 0.96
CLN6-221ENST00000637494 MBTPS2O43462 519 aa21.07■□□□□ 0.96
CLN6-221ENST00000637494 USO1O60763 962 aaKnown RBP21.07■□□□□ 0.96
CLN6-221ENST00000637494 ZC3H11AO75152 810 aaKnown RBP eCLIP21.07■□□□□ 0.96
CLN6-221ENST00000637494 TBX10O75333 385 aa21.07■□□□□ 0.96
CLN6-221ENST00000637494 PBX3P40426 434 aa21.07■□□□□ 0.96
CLN6-221ENST00000637494 BCAR1P56945 870 aa21.07■□□□□ 0.96
CLN6-221ENST00000637494 PTENP60484 403 aa21.07■□□□□ 0.96
CLN6-221ENST00000637494 DLX2Q07687 328 aaPredicted RBP21.07■□□□□ 0.96
CLN6-221ENST00000637494 TMEM87AQ8NBN3 555 aa21.07■□□□□ 0.96
CLN6-221ENST00000637494 POLR3CQ9BUI4 534 aaPredicted RBP21.07■□□□□ 0.96
CLN6-221ENST00000637494 RAB34Q9BZG1 259 aa21.07■□□□□ 0.96
CLN6-221ENST00000637494 MINDY3Q9H8M7 445 aa21.07■□□□□ 0.96
CLN6-221ENST00000637494 UBN1Q9NPG3 1134 aa21.07■□□□□ 0.96
CLN6-221ENST00000637494 XPNPEP1Q9NQW7 623 aa21.07■□□□□ 0.96
CLN6-221ENST00000637494 KANSL3Q9P2N6 904 aa21.07■□□□□ 0.96
CLN6-221ENST00000637494 PCDHGC5Q9Y5F6 944 aa21.07■□□□□ 0.96
CLN6-221ENST00000637494 STK24Q9Y6E0 443 aa21.07■□□□□ 0.96
CLN6-221ENST00000637494 FSCN2O14926 492 aa21.06■□□□□ 0.96
CLN6-221ENST00000637494 PER2O15055 1255 aa21.06■□□□□ 0.96
CLN6-221ENST00000637494 CA8P35219 290 aa21.06■□□□□ 0.96
CLN6-221ENST00000637494 SMC1AQ14683 1233 aaKnown RBP21.06■□□□□ 0.96
CLN6-221ENST00000637494 SMAD2Q15796 467 aaKnown RBP21.06■□□□□ 0.96
CLN6-221ENST00000637494 DUSP6Q16828 381 aa21.06■□□□□ 0.96
CLN6-221ENST00000637494 NOTUMQ6P988 496 aa21.06■□□□□ 0.96
CLN6-221ENST00000637494 CATSPER3Q86XQ3 398 aa21.06■□□□□ 0.96
CLN6-221ENST00000637494 ADHFE1Q8IWW8 467 aa21.06■□□□□ 0.96
CLN6-221ENST00000637494 HACE1Q8IYU2 909 aa21.06■□□□□ 0.96
CLN6-221ENST00000637494 SLC39A11Q8N1S5 342 aa21.06■□□□□ 0.96
CLN6-221ENST00000637494 MCPH1Q8NEM0 835 aa21.06■□□□□ 0.96
CLN6-221ENST00000637494 CCDC51Q96ER9 411 aa21.06■□□□□ 0.96
CLN6-221ENST00000637494 FAM193BQ96PV7 902 aaPredicted RBP21.06■□□□□ 0.96
CLN6-221ENST00000637494 RSAD1Q9HA92 442 aa21.06■□□□□ 0.96
CLN6-221ENST00000637494 DBR1Q9UK59 544 aaKnown RBP21.06■□□□□ 0.96
CLN6-221ENST00000637494 MUTP22033 750 aa21.05■□□□□ 0.96
CLN6-221ENST00000637494 RPA1P27694 616 aa21.05■□□□□ 0.96
CLN6-221ENST00000637494 IFNLR1Q8IU57 520 aaPredicted RBP21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms