RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 NCK2O43639 380 aa15.34■□□□□ 0.05
PNKP-228ENST00000637325 BMP1P13497 986 aa15.34■□□□□ 0.05
PNKP-228ENST00000637325 KCNA5P22460 613 aa15.34■□□□□ 0.05
PNKP-228ENST00000637325 FXR2P51116 673 aaKnown RBP eCLIP15.34■□□□□ 0.05
PNKP-228ENST00000637325 RAB27AP51159 221 aa15.34■□□□□ 0.05
PNKP-228ENST00000637325 LONRF3Q496Y0 759 aa15.34■□□□□ 0.05
PNKP-228ENST00000637325 CLLU1OSQ5K130 101 aa15.34■□□□□ 0.05
PNKP-228ENST00000637325 LARP1BQ659C4 914 aaKnown RBP15.34■□□□□ 0.05
PNKP-228ENST00000637325 POTEGQ6S5H5 508 aa15.34■□□□□ 0.05
PNKP-228ENST00000637325 ZNF598Q86UK7 904 aaKnown RBP15.34■□□□□ 0.05
PNKP-228ENST00000637325 C4orf32Q8N8J7 132 aa15.34■□□□□ 0.05
PNKP-228ENST00000637325 MICAL1Q8TDZ2 1067 aa15.34■□□□□ 0.05
PNKP-228ENST00000637325 PGBD4Q96DM1 585 aa15.34■□□□□ 0.05
PNKP-228ENST00000637325 UHRF1Q96T88 793 aaPredicted RBP15.34■□□□□ 0.05
PNKP-228ENST00000637325 TRAIPQ9BWF2 469 aa15.34■□□□□ 0.05
PNKP-228ENST00000637325 MRPL9Q9BYD2 267 aaKnown RBP15.34■□□□□ 0.05
PNKP-228ENST00000637325 BACH2Q9BYV9 841 aa15.34■□□□□ 0.05
PNKP-228ENST00000637325 POLR3FQ9H1D9 316 aaPredicted RBP15.34■□□□□ 0.05
PNKP-228ENST00000637325 IGFLR1Q9H665 355 aa15.34■□□□□ 0.05
PNKP-228ENST00000637325 CWH43Q9H720 699 aa15.34■□□□□ 0.05
PNKP-228ENST00000637325 MINDY3Q9H8M7 445 aa15.34■□□□□ 0.05
PNKP-228ENST00000637325 RNF19AQ9NV58 838 aa15.34■□□□□ 0.05
PNKP-228ENST00000637325 HCSTQ9UBK5 93 aa15.34■□□□□ 0.05
PNKP-228ENST00000637325 DBR1Q9UK59 544 aaKnown RBP15.34■□□□□ 0.05
PNKP-228ENST00000637325 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.33■□□□□ 0.04
PNKP-228ENST00000637325 LAD1O00515 517 aa15.33■□□□□ 0.04
PNKP-228ENST00000637325 FGF18O76093 207 aa15.33■□□□□ 0.04
PNKP-228ENST00000637325 MUTP22033 750 aa15.33■□□□□ 0.04
PNKP-228ENST00000637325 ARL2P36404 184 aa15.33■□□□□ 0.04
PNKP-228ENST00000637325 PTENP60484 403 aa15.33■□□□□ 0.04
PNKP-228ENST00000637325 UBE3AQ05086 875 aa15.33■□□□□ 0.04
PNKP-228ENST00000637325 PDIA5Q14554 519 aa15.33■□□□□ 0.04
PNKP-228ENST00000637325 RILPL1Q5EBL4 403 aa15.33■□□□□ 0.04
PNKP-228ENST00000637325 DTHD1Q6ZMT9 781 aa15.33■□□□□ 0.04
PNKP-228ENST00000637325 LRRC55Q6ZSA7 311 aa15.33■□□□□ 0.04
PNKP-228ENST00000637325 MCPH1Q8NEM0 835 aa15.33■□□□□ 0.04
PNKP-228ENST00000637325 ASAP3Q8TDY4 903 aa15.33■□□□□ 0.04
PNKP-228ENST00000637325 LPPQ93052 612 aa15.33■□□□□ 0.04
PNKP-228ENST00000637325 PABPC5Q96DU9 382 aaKnown RBP15.33■□□□□ 0.04
PNKP-228ENST00000637325 ZNF558Q96NG5 402 aa15.33■□□□□ 0.04
PNKP-228ENST00000637325 CLDND1Q9NY35 253 aa15.33■□□□□ 0.04
PNKP-228ENST00000637325 PUF60Q9UHX1 559 aaKnown RBP15.33■□□□□ 0.04
PNKP-228ENST00000637325 PCDHB2Q9Y5E7 798 aa15.33■□□□□ 0.04
PNKP-228ENST00000637325 ATF7P17544 494 aaPredicted RBP15.32■□□□□ 0.04
PNKP-228ENST00000637325 GLRA2P23416 452 aa15.32■□□□□ 0.04
PNKP-228ENST00000637325 DNAJB1P25685 340 aa15.32■□□□□ 0.04
PNKP-228ENST00000637325 AXLP30530 894 aa15.32■□□□□ 0.04
PNKP-228ENST00000637325 POU5F1BQ06416 359 aa15.32■□□□□ 0.04
PNKP-228ENST00000637325 CAPSQ13938 189 aa15.32■□□□□ 0.04
PNKP-228ENST00000637325 PCBP1Q15365 356 aaKnown RBP eCLIP15.32■□□□□ 0.04
PNKP-228ENST00000637325 KRT79Q5XKE5 535 aa15.32■□□□□ 0.04
PNKP-228ENST00000637325 PADI6Q6TGC4 694 aa15.32■□□□□ 0.04
PNKP-228ENST00000637325 KCNT2Q6UVM3 1135 aa15.32■□□□□ 0.04
PNKP-228ENST00000637325 GLB1LQ6UWU2 654 aa15.32■□□□□ 0.04
PNKP-228ENST00000637325 SNX29Q8TEQ0 813 aa15.32■□□□□ 0.04
PNKP-228ENST00000637325 RSPH1Q8WYR4 309 aa15.32■□□□□ 0.04
PNKP-228ENST00000637325 TLR9Q9NR96 1032 aa15.32■□□□□ 0.04
PNKP-228ENST00000637325 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.32■□□□□ 0.04
PNKP-228ENST00000637325 KIAA1024Q9UPX6 916 aa15.32■□□□□ 0.04
PNKP-228ENST00000637325 INPP5FQ9Y2H2 1132 aa15.32■□□□□ 0.04
PNKP-228ENST00000637325 LRRIQ4A6NIV6 560 aa15.31■□□□□ 0.04
PNKP-228ENST00000637325 TNFRSF10AO00220 468 aa15.31■□□□□ 0.04
PNKP-228ENST00000637325 ZNF623O75123 536 aa15.31■□□□□ 0.04
PNKP-228ENST00000637325 PPM1AP35813 382 aa15.31■□□□□ 0.04
PNKP-228ENST00000637325 PRPHP41219 470 aa15.31■□□□□ 0.04
PNKP-228ENST00000637325 KRT17Q04695 432 aa15.31■□□□□ 0.04
PNKP-228ENST00000637325 RNASELQ05823 741 aaKnown RBP15.31■□□□□ 0.04
PNKP-228ENST00000637325 HYAL1Q12794 435 aa15.31■□□□□ 0.04
PNKP-228ENST00000637325 CAMK1Q14012 370 aa15.31■□□□□ 0.04
PNKP-228ENST00000637325 LEXMQ3ZCV2 418 aa15.31■□□□□ 0.04
PNKP-228ENST00000637325 NOTUMQ6P988 496 aa15.31■□□□□ 0.04
PNKP-228ENST00000637325 URGCPQ8TCY9 931 aa15.31■□□□□ 0.04
PNKP-228ENST00000637325 GPRC5CQ9NQ84 441 aa15.31■□□□□ 0.04
PNKP-228ENST00000637325 SPG21Q9NZD8 308 aa15.31■□□□□ 0.04
PNKP-228ENST00000637325 XIRP2A4UGR9 3374 aa15.31■□□□□ 0.04
PNKP-228ENST00000637325 TRIP11Q15643 1979 aa15.31■□□□□ 0.04
PNKP-228ENST00000637325 H3BQ06 376 aaPredicted RBP15.3■□□□□ 0.04
PNKP-228ENST00000637325 TSPAN1O60635 241 aa15.3■□□□□ 0.04
PNKP-228ENST00000637325 CYP11B2P19099 503 aa15.3■□□□□ 0.04
PNKP-228ENST00000637325 HOXA11P31270 313 aaPredicted RBP15.3■□□□□ 0.04
PNKP-228ENST00000637325 IRS1P35568 1242 aa15.3■□□□□ 0.04
PNKP-228ENST00000637325 ALDH7A1P49419 539 aaKnown RBP15.3■□□□□ 0.04
PNKP-228ENST00000637325 PLCB3Q01970 1234 aa15.3■□□□□ 0.04
PNKP-228ENST00000637325 MBTD1Q05BQ5 628 aa15.3■□□□□ 0.04
PNKP-228ENST00000637325 ZRSR1Q15695 479 aaKnown RBP15.3■□□□□ 0.04
PNKP-228ENST00000637325 ECM1Q16610 540 aa15.3■□□□□ 0.04
PNKP-228ENST00000637325 PUS10Q3MIT2 529 aaKnown RBP15.3■□□□□ 0.04
PNKP-228ENST00000637325 NOMO2Q5JPE7 1267 aa15.3■□□□□ 0.04
PNKP-228ENST00000637325 PDE12Q6L8Q7 609 aaKnown RBP15.3■□□□□ 0.04
PNKP-228ENST00000637325 RBM23Q86U06 439 aaKnown RBP15.3■□□□□ 0.04
PNKP-228ENST00000637325 IFNLR1Q8IU57 520 aaPredicted RBP15.3■□□□□ 0.04
PNKP-228ENST00000637325 ZBTB8OSQ8IWT0 167 aa15.3■□□□□ 0.04
PNKP-228ENST00000637325 IGSF22Q8N9C0 903 aa15.3■□□□□ 0.04
PNKP-228ENST00000637325 CNNM3Q8NE01 707 aa15.3■□□□□ 0.04
PNKP-228ENST00000637325 MRPS27Q92552 414 aaKnown RBP15.3■□□□□ 0.04
PNKP-228ENST00000637325 CCDC51Q96ER9 411 aa15.3■□□□□ 0.04
PNKP-228ENST00000637325 CPB2Q96IY4 423 aa15.3■□□□□ 0.04
PNKP-228ENST00000637325 NECAB3Q96P71 396 aaPredicted RBP15.3■□□□□ 0.04
PNKP-228ENST00000637325 TRIM6Q9C030 488 aaPredicted RBP15.3■□□□□ 0.04
PNKP-228ENST00000637325 DDX19AQ9NUU7 478 aaKnown RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms