RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 ELAC1Q9H777 363 aaKnown RBP9.09□□□□□ -0.95
PNKP-226ENST00000636840 IFT122Q9HBG6 1241 aa9.09□□□□□ -0.95
PNKP-226ENST00000636840 CIZ1Q9ULV3 898 aaPredicted RBP9.09□□□□□ -0.95
PNKP-226ENST00000636840 PIN4Q9Y237 131 aaKnown RBP9.09□□□□□ -0.95
PNKP-226ENST00000636840 A0A0U1RQF3 1178 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 SOX1O00570 391 aaPredicted RBP9.08□□□□□ -0.96
PNKP-226ENST00000636840 HIP1RO75146 1068 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 TBCAO75347 108 aaKnown RBP9.08□□□□□ -0.96
PNKP-226ENST00000636840 CSDE1O75534 798 aaKnown RBP9.08□□□□□ -0.96
PNKP-226ENST00000636840 FAM13AO94988 1023 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 FGFR4P22455 802 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 RAB27AP51159 221 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 FAM189BP81408 668 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 GRIN1Q05586 938 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 CAPSQ13938 189 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 MCM6Q14566 821 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 CSPP1Q1MSJ5 1256 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 TCTN1Q2MV58 587 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 NOTUMQ6P988 496 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 GPBP1Q86WP2 473 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 FIBCD1Q8N539 461 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 SLC17A8Q8NDX2 589 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 ASAP3Q8TDY4 903 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 CCDC51Q96ER9 411 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 PRIMPOLQ96LW4 560 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 SAMD11Q96NU1 681 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 GAS2L1Q99501 681 aaPredicted RBP9.08□□□□□ -0.96
PNKP-226ENST00000636840 ADPGKQ9BRR6 497 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 OSBPL7Q9BZF2 842 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 TRIM6Q9C030 488 aaPredicted RBP9.08□□□□□ -0.96
PNKP-226ENST00000636840 NKX2-4Q9H2Z4 354 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 CUEDC2Q9H467 287 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 ZHX3Q9H4I2 956 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 ZNF576Q9H609 170 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 UBN1Q9NPG3 1134 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 GPRC5CQ9NQ84 441 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 KMT5AQ9NQR1 393 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 TMEM161AQ9NX61 479 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 ODF2LQ9ULJ1 636 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 PCDHA7Q9UN72 937 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 RWDD3Q9Y3V2 267 aa9.08□□□□□ -0.96
PNKP-226ENST00000636840 TANC1Q9C0D5 1861 aa9.07□□□□□ -0.96
PNKP-226ENST00000636840 CARNS1A5YM72 827 aa9.07□□□□□ -0.96
PNKP-226ENST00000636840 C9IYK1 514 aa9.07□□□□□ -0.96
PNKP-226ENST00000636840 ACKR2O00590 384 aa9.07□□□□□ -0.96
PNKP-226ENST00000636840 MGEA5O60502 916 aa9.07□□□□□ -0.96
PNKP-226ENST00000636840 LIG1P18858 919 aa9.07□□□□□ -0.96
PNKP-226ENST00000636840 PBX2P40425 430 aa9.07□□□□□ -0.96
PNKP-226ENST00000636840 SLC12A3P55017 1021 aa9.07□□□□□ -0.96
PNKP-226ENST00000636840 PEX3P56589 373 aa9.07□□□□□ -0.96
PNKP-226ENST00000636840 HTRA4P83105 476 aaPredicted RBP9.07□□□□□ -0.96
PNKP-226ENST00000636840 RAD51AP2Q09MP3 1159 aa9.07□□□□□ -0.96
PNKP-226ENST00000636840 STRN3Q13033 797 aa9.07□□□□□ -0.96
PNKP-226ENST00000636840 BTG3Q14201 252 aaPredicted RBP9.07□□□□□ -0.96
PNKP-226ENST00000636840 DSC3Q14574 896 aa9.07□□□□□ -0.96
PNKP-226ENST00000636840 SPOUT1Q5T280 376 aaKnown RBP9.07□□□□□ -0.96
PNKP-226ENST00000636840 ADALQ6DHV7 355 aa9.07□□□□□ -0.96
PNKP-226ENST00000636840 USP49Q70CQ1 688 aa9.07□□□□□ -0.96
PNKP-226ENST00000636840 KCNK18Q7Z418 384 aa9.07□□□□□ -0.96
PNKP-226ENST00000636840 ECHDC2Q86YB7 292 aa9.07□□□□□ -0.96
PNKP-226ENST00000636840 CEP57L1Q8IYX8 460 aa9.07□□□□□ -0.96
PNKP-226ENST00000636840 MYCT1Q8N699 235 aa9.07□□□□□ -0.96
PNKP-226ENST00000636840 PDILTQ8N807 584 aa9.07□□□□□ -0.96
PNKP-226ENST00000636840 RNF169Q8NCN4 708 aa9.07□□□□□ -0.96
PNKP-226ENST00000636840 SPIRE2Q8WWL2 714 aa9.07□□□□□ -0.96
PNKP-226ENST00000636840 TGS1Q96RS0 853 aaKnown RBP9.07□□□□□ -0.96
PNKP-226ENST00000636840 NTPCRQ9BSD7 190 aaKnown RBP9.07□□□□□ -0.96
PNKP-226ENST00000636840 TRAIPQ9BWF2 469 aa9.07□□□□□ -0.96
PNKP-226ENST00000636840 TMX1Q9H3N1 280 aa9.07□□□□□ -0.96
PNKP-226ENST00000636840 TMEM134Q9H6X4 195 aa9.07□□□□□ -0.96
PNKP-226ENST00000636840 AAASQ9NRG9 546 aa9.07□□□□□ -0.96
PNKP-226ENST00000636840 CHMP5Q9NZZ3 219 aa9.07□□□□□ -0.96
PNKP-226ENST00000636840 ZDHHC9Q9Y397 364 aa9.07□□□□□ -0.96
PNKP-226ENST00000636840 RANBP2P49792 3224 aaKnown RBP9.07□□□□□ -0.96
PNKP-226ENST00000636840 SFI1A8K8P3 1242 aa9.06□□□□□ -0.96
PNKP-226ENST00000636840 N4BP3O15049 544 aa9.06□□□□□ -0.96
PNKP-226ENST00000636840 ZNF623O75123 536 aa9.06□□□□□ -0.96
PNKP-226ENST00000636840 DGKIO75912 1065 aa9.06□□□□□ -0.96
PNKP-226ENST00000636840 PRKCBP05771 671 aa9.06□□□□□ -0.96
PNKP-226ENST00000636840 RB1P06400 928 aa9.06□□□□□ -0.96
PNKP-226ENST00000636840 CA3P07451 260 aa9.06□□□□□ -0.96
PNKP-226ENST00000636840 PLS3P13797 630 aa9.06□□□□□ -0.96
PNKP-226ENST00000636840 CMA1P23946 247 aa9.06□□□□□ -0.96
PNKP-226ENST00000636840 PRPF4BQ13523 1007 aaKnown RBP9.06□□□□□ -0.96
PNKP-226ENST00000636840 FAM187BQ17R55 369 aa9.06□□□□□ -0.96
PNKP-226ENST00000636840 SLC27A1Q6PCB7 646 aa9.06□□□□□ -0.96
PNKP-226ENST00000636840 PPP4R3CPQ6ZMV5 832 aa9.06□□□□□ -0.96
PNKP-226ENST00000636840 CCDC65Q8IXS2 484 aa9.06□□□□□ -0.96
PNKP-226ENST00000636840 CMTR2Q8IYT2 770 aaKnown RBP9.06□□□□□ -0.96
PNKP-226ENST00000636840 LEO1Q8WVC0 666 aaPredicted RBP9.06□□□□□ -0.96
PNKP-226ENST00000636840 TCHPQ9BT92 498 aa9.06□□□□□ -0.96
PNKP-226ENST00000636840 RUSC1Q9BVN2 902 aa9.06□□□□□ -0.96
PNKP-226ENST00000636840 TMEM117Q9H0C3 514 aa9.06□□□□□ -0.96
PNKP-226ENST00000636840 FZD8Q9H461 694 aa9.06□□□□□ -0.96
PNKP-226ENST00000636840 MINDY3Q9H8M7 445 aa9.06□□□□□ -0.96
PNKP-226ENST00000636840 MAGEF1Q9HAY2 307 aa9.06□□□□□ -0.96
PNKP-226ENST00000636840 PARVGQ9HBI0 331 aa9.06□□□□□ -0.96
PNKP-226ENST00000636840 POLD4Q9HCU8 107 aa9.06□□□□□ -0.96
PNKP-226ENST00000636840 BLOC1S4Q9NUP1 217 aa9.06□□□□□ -0.96
PNKP-226ENST00000636840 AGPAT5Q9NUQ2 364 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms