RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 BARX2Q9UMQ3 279 aaPredicted RBP20.51■□□□□ 0.87
CLN6-214ENST00000636314 PCDHGC5Q9Y5F6 944 aa20.51■□□□□ 0.87
CLN6-214ENST00000636314 COL4A3BPQ9Y5P4 624 aa20.51■□□□□ 0.87
CLN6-214ENST00000636314 TMEM221A6NGB7 291 aa20.5■□□□□ 0.87
CLN6-214ENST00000636314 TBKBP1A7MCY6 615 aa20.5■□□□□ 0.87
CLN6-214ENST00000636314 M0R296 226 aa20.5■□□□□ 0.87
CLN6-214ENST00000636314 CSDE1O75534 798 aaKnown RBP20.5■□□□□ 0.87
CLN6-214ENST00000636314 LYPLA2O95372 231 aa20.5■□□□□ 0.87
CLN6-214ENST00000636314 CD2BP2O95400 341 aaKnown RBP20.5■□□□□ 0.87
CLN6-214ENST00000636314 OR52Z1P0C646 297 aa20.5■□□□□ 0.87
CLN6-214ENST00000636314 MCM2P49736 904 aa20.5■□□□□ 0.87
CLN6-214ENST00000636314 ZNF174Q15697 407 aa20.5■□□□□ 0.87
CLN6-214ENST00000636314 KSR1Q8IVT5 923 aa20.5■□□□□ 0.87
CLN6-214ENST00000636314 SMRP1Q8NCR6 262 aa20.5■□□□□ 0.87
CLN6-214ENST00000636314 TCP11Q8WWU5 503 aa20.5■□□□□ 0.87
CLN6-214ENST00000636314 HSD17B14Q9BPX1 270 aa20.5■□□□□ 0.87
CLN6-214ENST00000636314 DACT1Q9NYF0 836 aa20.5■□□□□ 0.87
CLN6-214ENST00000636314 KMT2EQ8IZD2 1858 aa20.5■□□□□ 0.87
CLN6-214ENST00000636314 ZBTB39O15060 712 aa20.49■□□□□ 0.87
CLN6-214ENST00000636314 FGFR1P11362 822 aa20.49■□□□□ 0.87
CLN6-214ENST00000636314 TRAPPC10P48553 1259 aa20.49■□□□□ 0.87
CLN6-214ENST00000636314 FAM189BP81408 668 aa20.49■□□□□ 0.87
CLN6-214ENST00000636314 COASYQ13057 564 aa20.49■□□□□ 0.87
CLN6-214ENST00000636314 FAM102BQ5T8I3 360 aa20.49■□□□□ 0.87
CLN6-214ENST00000636314 MICAL1Q8TDZ2 1067 aa20.49■□□□□ 0.87
CLN6-214ENST00000636314 TMEM143Q96AN5 459 aa20.49■□□□□ 0.87
CLN6-214ENST00000636314 PBXIP1Q96AQ6 731 aa20.49■□□□□ 0.87
CLN6-214ENST00000636314 MTRQ99707 1265 aa20.49■□□□□ 0.87
CLN6-214ENST00000636314 TLE6Q9H808 572 aa20.49■□□□□ 0.87
CLN6-214ENST00000636314 LOC730098B7Z3J9 87 aa20.48■□□□□ 0.87
CLN6-214ENST00000636314 HOXA2O43364 376 aa20.48■□□□□ 0.87
CLN6-214ENST00000636314 GLP2RO95838 553 aa20.48■□□□□ 0.87
CLN6-214ENST00000636314 TRIM67Q6ZTA4 783 aa20.48■□□□□ 0.87
CLN6-214ENST00000636314 ECHDC2Q86YB7 292 aa20.48■□□□□ 0.87
CLN6-214ENST00000636314 RNF169Q8NCN4 708 aa20.48■□□□□ 0.87
CLN6-214ENST00000636314 ANKEF1Q9NU02 776 aa20.48■□□□□ 0.87
CLN6-214ENST00000636314 USP15Q9Y4E8 981 aaPredicted RBP20.48■□□□□ 0.87
CLN6-214ENST00000636314 PCDHB12Q9Y5F1 795 aa20.48■□□□□ 0.87
CLN6-214ENST00000636314 PER2O15055 1255 aa20.47■□□□□ 0.87
CLN6-214ENST00000636314 U2AF2P26368 475 aaKnown RBP eCLIP20.47■□□□□ 0.87
CLN6-214ENST00000636314 TECP42680 631 aa20.47■□□□□ 0.87
CLN6-214ENST00000636314 ZXDAP98168 799 aa20.47■□□□□ 0.87
CLN6-214ENST00000636314 CATSPER4Q7RTX7 472 aa20.47■□□□□ 0.87
CLN6-214ENST00000636314 BMP8AQ7Z5Y6 402 aa20.47■□□□□ 0.87
CLN6-214ENST00000636314 SUGP1Q8IWZ8 645 aaKnown RBP20.47■□□□□ 0.87
CLN6-214ENST00000636314 ABI1Q8IZP0 508 aa20.47■□□□□ 0.87
CLN6-214ENST00000636314 PRSS33Q8NF86 280 aa20.47■□□□□ 0.87
CLN6-214ENST00000636314 ERMNQ8TAM6 284 aa20.47■□□□□ 0.87
CLN6-214ENST00000636314 PRPF31Q8WWY3 499 aaKnown RBP20.47■□□□□ 0.87
CLN6-214ENST00000636314 TMEM117Q9H0C3 514 aa20.47■□□□□ 0.87
CLN6-214ENST00000636314 CHST12Q9NRB3 414 aa20.47■□□□□ 0.87
CLN6-214ENST00000636314 AAASQ9NRG9 546 aa20.47■□□□□ 0.87
CLN6-214ENST00000636314 PIN4Q9Y237 131 aaKnown RBP20.47■□□□□ 0.87
CLN6-214ENST00000636314 DGAT1O75907 488 aa20.46■□□□□ 0.87
CLN6-214ENST00000636314 LAMTOR4Q0VGL1 99 aa20.46■□□□□ 0.87
CLN6-214ENST00000636314 NBR1Q14596 966 aa20.46■□□□□ 0.87
CLN6-214ENST00000636314 TWF2Q6IBS0 349 aaKnown RBP20.46■□□□□ 0.87
CLN6-214ENST00000636314 FERMT3Q86UX7 667 aa20.46■□□□□ 0.87
CLN6-214ENST00000636314 RPGRIP1Q96KN7 1286 aa20.46■□□□□ 0.87
CLN6-214ENST00000636314 PHOX2BQ99453 314 aa20.46■□□□□ 0.87
CLN6-214ENST00000636314 PHF7Q9BWX1 381 aaPredicted RBP20.46■□□□□ 0.87
CLN6-214ENST00000636314 IFT122Q9HBG6 1241 aa20.46■□□□□ 0.87
CLN6-214ENST00000636314 TUFT1Q9NNX1 390 aa20.46■□□□□ 0.87
CLN6-214ENST00000636314 XPNPEP1Q9NQW7 623 aa20.46■□□□□ 0.87
CLN6-214ENST00000636314 A0A0U1RQF3 1178 aa20.45■□□□□ 0.86
CLN6-214ENST00000636314 ASAP2O43150 1006 aa20.45■□□□□ 0.86
CLN6-214ENST00000636314 SRGAP2CP0DJJ0 459 aa20.45■□□□□ 0.86
CLN6-214ENST00000636314 GJB2P29033 226 aa20.45■□□□□ 0.86
CLN6-214ENST00000636314 RARRES1P49788 294 aa20.45■□□□□ 0.86
CLN6-214ENST00000636314 PTPN5P54829 565 aa20.45■□□□□ 0.86
CLN6-214ENST00000636314 IER5LQ5T953 404 aa20.45■□□□□ 0.86
CLN6-214ENST00000636314 MCTP1Q6DN14 999 aa20.45■□□□□ 0.86
CLN6-214ENST00000636314 THNSL1Q8IYQ7 743 aa20.45■□□□□ 0.86
CLN6-214ENST00000636314 LRRC43Q8N309 656 aa20.45■□□□□ 0.86
CLN6-214ENST00000636314 RNF149Q8NC42 400 aa20.45■□□□□ 0.86
CLN6-214ENST00000636314 PIGOQ8TEQ8 1089 aa20.45■□□□□ 0.86
CLN6-214ENST00000636314 TLR9Q9NR96 1032 aa20.45■□□□□ 0.86
CLN6-214ENST00000636314 HCSTQ9UBK5 93 aa20.45■□□□□ 0.86
CLN6-214ENST00000636314 H3BQV1 296 aa20.44■□□□□ 0.86
CLN6-214ENST00000636314 SPATA31C1P0DKV0 1188 aa20.44■□□□□ 0.86
CLN6-214ENST00000636314 LAG3P18627 525 aa20.44■□□□□ 0.86
CLN6-214ENST00000636314 PHKA2P46019 1235 aa20.44■□□□□ 0.86
CLN6-214ENST00000636314 RBM10P98175 930 aaKnown RBP20.44■□□□□ 0.86
CLN6-214ENST00000636314 UBE3AQ05086 875 aa20.44■□□□□ 0.86
CLN6-214ENST00000636314 MXD4Q14582 209 aaPredicted RBP20.44■□□□□ 0.86
CLN6-214ENST00000636314 CBX2Q14781 532 aaPredicted RBP20.44■□□□□ 0.86
CLN6-214ENST00000636314 HAUS3Q68CZ6 603 aa20.44■□□□□ 0.86
CLN6-214ENST00000636314 SRGAP1Q7Z6B7 1085 aa20.44■□□□□ 0.86
CLN6-214ENST00000636314 CATSPER3Q86XQ3 398 aa20.44■□□□□ 0.86
CLN6-214ENST00000636314 AGPAT5Q9NUQ2 364 aa20.44■□□□□ 0.86
CLN6-214ENST00000636314 RNF19AQ9NV58 838 aa20.44■□□□□ 0.86
CLN6-214ENST00000636314 TYW1Q9NV66 732 aaKnown RBP20.44■□□□□ 0.86
CLN6-214ENST00000636314 SMC3Q9UQE7 1217 aa20.44■□□□□ 0.86
CLN6-214ENST00000636314 USO1O60763 962 aaKnown RBP20.43■□□□□ 0.86
CLN6-214ENST00000636314 MED24O75448 989 aa20.43■□□□□ 0.86
CLN6-214ENST00000636314 FGF18O76093 207 aa20.43■□□□□ 0.86
CLN6-214ENST00000636314 EOMESO95936 686 aa20.43■□□□□ 0.86
CLN6-214ENST00000636314 SKIP12755 728 aa20.43■□□□□ 0.86
CLN6-214ENST00000636314 XRCC6P12956 609 aaKnown RBP eCLIP20.43■□□□□ 0.86
CLN6-214ENST00000636314 ATF7P17544 494 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms