RNA–Protein interactions for RNA: ENST00000635776.1

SCN1A-210, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5 BASIC

Gene SCN1A, Length 10,107 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-210ENST00000635776 AGO4Q9HCK5 861 aaKnown RBP4.92□□□□□ -1.62
SCN1A-210ENST00000635776 WNT10BO00744 389 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 MED7O43513 233 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 PPP1R11O60927 126 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-210ENST00000635776 SPATA31C1P0DKV0 1188 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 HADHQ16836 314 aaKnown RBP4.91□□□□□ -1.62
SCN1A-210ENST00000635776 WDR59Q6PJI9 974 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 ZNF365Q70YC5 407 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 MIGA2Q7L4E1 593 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 TMEM174Q8WUU8 243 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 BAP1Q92560 729 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 HSPBP1Q9NZL4 362 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 RGL1Q9NZL6 768 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 STRIP2Q9ULQ0 834 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 IGLV3-22A0A075B6J6 115 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 XPOTO43592 962 aaKnown RBP4.91□□□□□ -1.62
SCN1A-210ENST00000635776 PON1P27169 355 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 PEX3P56589 373 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 GCNT1Q02742 428 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 GFPT1Q06210 699 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-210ENST00000635776 C11orf63Q6NUN7 778 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 ZNF572Q7Z3I7 529 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-210ENST00000635776 C3orf20Q8ND61 904 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 FUT8Q9BYC5 575 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 ZNF302Q9NR11 478 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 SEPT9Q9UHD8 586 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-210ENST00000635776 CNOT7Q9UIV1 285 aaKnown RBP4.91□□□□□ -1.62
SCN1A-210ENST00000635776 PPP1R7Q15435 360 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 STILQ15468 1287 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 MAP4K3Q8IVH8 894 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 C1orf131Q8NDD1 294 aaKnown RBP4.91□□□□□ -1.62
SCN1A-210ENST00000635776 ACER1Q8TDN7 264 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 CAVIN3Q969G5 261 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 GMLQ99445 158 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 HOMER2Q9NSB8 354 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 TRPC6Q9Y210 931 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 AKAP11Q9UKA4 1901 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 CACNA1SQ13698 1873 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 UNCXA6NJT0 531 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 COBLO75128 1261 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 SCLT1Q96NL6 688 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 CAMKK2Q96RR4 588 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 TAF1DQ9H5J8 278 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-210ENST00000635776 UBE2TQ9NPD8 197 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-210ENST00000635776 H0YHG0 523 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 CALB1P05937 261 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 MYBP10242 640 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 KRT5P13647 590 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 RPS6P62753 249 aaKnown RBP4.91□□□□□ -1.62
SCN1A-210ENST00000635776 MEI1Q5TIA1 1274 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 USP38Q8NB14 1042 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 PROCA1Q8NCQ7 364 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-210ENST00000635776 PDE11AQ9HCR9 933 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 PKD2L1Q9P0L9 805 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 COL5A3P25940 1745 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-210ENST00000635776 CXCL11O14625 94 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 CTNNA2P26232 953 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 NMT1P30419 496 aaKnown RBP4.91□□□□□ -1.62
SCN1A-210ENST00000635776 RARRES1P49788 294 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 SLC20A2Q08357 652 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 EZH2Q15910 746 aaKnown RBP4.91□□□□□ -1.62
SCN1A-210ENST00000635776 KCNK18Q7Z418 384 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 RBM41Q96IZ5 413 aaKnown RBP4.91□□□□□ -1.62
SCN1A-210ENST00000635776 IRX2Q9BZI1 471 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-210ENST00000635776 GSTTP1A0A1W2PQM5 241 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 MAP2K7O14733 419 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 ATF7P17544 494 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-210ENST00000635776 POU5F1Q01860 360 aaKnown RBP4.91□□□□□ -1.62
SCN1A-210ENST00000635776 GUCY2DQ02846 1103 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 PGM5Q15124 567 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 ANKRD13CQ8N6S4 541 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 TTC13Q8NBP0 860 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 IPO4Q8TEX9 1081 aaKnown RBP4.91□□□□□ -1.62
SCN1A-210ENST00000635776 CRYGNQ8WXF5 182 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 GLG1Q92896 1179 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 FAXDC2Q96IV6 333 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 RUSC1Q9BVN2 902 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 ISCUQ9H1K1 167 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 TTC7AQ9ULT0 858 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-210ENST00000635776 FHOD1Q9Y613 1164 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 DENND3A2RUS2 1198 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 CTNNA1P35221 906 aaKnown RBP4.91□□□□□ -1.62
SCN1A-210ENST00000635776 NAMPTP43490 491 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 AARSP49588 968 aaKnown RBP eCLIP4.91□□□□□ -1.62
SCN1A-210ENST00000635776 DNA2P51530 1060 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 SH3BP5LQ7L8J4 393 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 PSPC1Q8WXF1 523 aaKnown RBP4.91□□□□□ -1.62
SCN1A-210ENST00000635776 SEPT1Q8WYJ6 367 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 P3H4Q92791 437 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 VCPIP1Q96JH7 1222 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 NUDT12Q9BQG2 462 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 ADPGKQ9BRR6 497 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 FRMD8P1Q9BZ68 369 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-210ENST00000635776 ZNF518BQ9C0D4 1074 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 GANQ9H2C0 597 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 PXMP2Q9NR77 195 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 RNF216Q9NWF9 866 aaPredicted RBP4.91□□□□□ -1.62
SCN1A-210ENST00000635776 PCDHB2Q9Y5E7 798 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 C4AP0C0L4 1744 aa4.91□□□□□ -1.62
SCN1A-210ENST00000635776 RNF40O75150 1001 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms