RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 USP38Q8NB14 1042 aa13.46□□□□□ -0.25
PTPN11-205ENST00000635625 TPCN2Q8NHX9 752 aa13.46□□□□□ -0.25
PTPN11-205ENST00000635625 SLC30A5Q8TAD4 765 aa13.46□□□□□ -0.25
PTPN11-205ENST00000635625 SENP7Q9BQF6 1050 aa13.46□□□□□ -0.25
PTPN11-205ENST00000635625 PACSIN1Q9BY11 444 aa13.46□□□□□ -0.25
PTPN11-205ENST00000635625 GLIS2Q9BZE0 524 aaPredicted RBP13.46□□□□□ -0.25
PTPN11-205ENST00000635625 AS3MTQ9HBK9 375 aa13.46□□□□□ -0.25
PTPN11-205ENST00000635625 RBM12Q9NTZ6 932 aaKnown RBP13.46□□□□□ -0.25
PTPN11-205ENST00000635625 CWC15Q9P013 229 aaKnown RBP13.46□□□□□ -0.25
PTPN11-205ENST00000635625 TMEM59LQ9UK28 342 aa13.46□□□□□ -0.25
PTPN11-205ENST00000635625 DNAJC12Q9UKB3 198 aa13.46□□□□□ -0.25
PTPN11-205ENST00000635625 ZHX1Q9UKY1 873 aaPredicted RBP13.46□□□□□ -0.25
PTPN11-205ENST00000635625 FAN1Q9Y2M0 1017 aa13.46□□□□□ -0.25
PTPN11-205ENST00000635625 ZHX2Q9Y6X8 837 aa13.46□□□□□ -0.25
PTPN11-205ENST00000635625 ZC3H4Q9UPT8 1303 aaKnown RBP13.46□□□□□ -0.26
PTPN11-205ENST00000635625 A6NNZ2 444 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 GOLGA8KD6RF30 607 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 NFIBO00712 420 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 RNF40O75150 1001 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 FTCDO95954 541 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 CXCR5P32302 372 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 CYP2J2P51589 502 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 PSMC5P62195 406 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 GTF2BQ00403 316 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 TCEAL1Q15170 157 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 TUBB8Q3ZCM7 444 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 LEKR1Q6ZMV7 388 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 MREGQ8N565 214 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 WHAMMQ8TF30 809 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 RFFLQ8WZ73 363 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 TEPSINQ96N21 525 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 SYT11Q9BT88 431 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 C17orf75Q9HAS0 396 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 ZCCHC17Q9NP64 241 aaKnown RBP13.45□□□□□ -0.26
PTPN11-205ENST00000635625 COL20A1Q9P218 1284 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 PFASO15067 1338 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 PGRMC1O00264 195 aaKnown RBP13.45□□□□□ -0.26
PTPN11-205ENST00000635625 DDX3XO00571 662 aaKnown RBP eCLIP13.45□□□□□ -0.268e-15■■■■□ 25
PTPN11-205ENST00000635625 IVLP07476 585 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 ALAS1P13196 640 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 YWHABP31946 246 aaKnown RBP13.45□□□□□ -0.26
PTPN11-205ENST00000635625 NOP2P46087 812 aaKnown RBP13.45□□□□□ -0.26
PTPN11-205ENST00000635625 HADHBP55084 474 aaKnown RBP13.45□□□□□ -0.26
PTPN11-205ENST00000635625 NCKAP1LP55160 1127 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 ITGB3BPQ13352 177 aaPredicted RBP13.45□□□□□ -0.26
PTPN11-205ENST00000635625 CUL1Q13616 776 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 DRAP1Q14919 205 aaPredicted RBP13.45□□□□□ -0.26
PTPN11-205ENST00000635625 PGM5Q15124 567 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 NBPF9Q3BBW0 867 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 ZNF746Q6NUN9 644 aaPredicted RBP13.45□□□□□ -0.26
PTPN11-205ENST00000635625 USP37Q86T82 979 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 XXYLT1Q8NBI6 393 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 AFAP1L1Q8TED9 768 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 CTNNBL1Q8WYA6 563 aaPredicted RBP13.45□□□□□ -0.26
PTPN11-205ENST00000635625 GPRASP2Q96D09 838 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 DMGDHQ9UI17 866 aaKnown RBP13.45□□□□□ -0.26
PTPN11-205ENST00000635625 KCNG1Q9UIX4 513 aa13.45□□□□□ -0.26
PTPN11-205ENST00000635625 TTC7AQ9ULT0 858 aaPredicted RBP13.45□□□□□ -0.26
PTPN11-205ENST00000635625 ARID2Q68CP9 1835 aa13.44□□□□□ -0.26
PTPN11-205ENST00000635625 PHIPQ8WWQ0 1821 aa13.44□□□□□ -0.26
PTPN11-205ENST00000635625 LTBP3Q9NS15 1303 aa13.44□□□□□ -0.26
PTPN11-205ENST00000635625 LOC285556D6RIA3 1793 aa13.44□□□□□ -0.26
PTPN11-205ENST00000635625 STAM2O75886 525 aa13.44□□□□□ -0.26
PTPN11-205ENST00000635625 SYF2O95926 243 aaKnown RBP13.44□□□□□ -0.26
PTPN11-205ENST00000635625 CCND2P30279 289 aa13.44□□□□□ -0.26
PTPN11-205ENST00000635625 MRPS9P82933 396 aaKnown RBP13.44□□□□□ -0.26
PTPN11-205ENST00000635625 PPFIA1Q13136 1202 aa13.44□□□□□ -0.26
PTPN11-205ENST00000635625 ENOX2Q16206 610 aaKnown RBP13.44□□□□□ -0.26
PTPN11-205ENST00000635625 DALRD3Q5D0E6 543 aaKnown RBP13.44□□□□□ -0.26
PTPN11-205ENST00000635625 SND1Q7KZF4 910 aaKnown RBP eCLIP13.44□□□□□ -0.26
PTPN11-205ENST00000635625 PEX26Q7Z412 305 aa13.44□□□□□ -0.26
PTPN11-205ENST00000635625 NLRX1Q86UT6 975 aa13.44□□□□□ -0.26
PTPN11-205ENST00000635625 CDAN1Q8IWY9 1227 aa13.44□□□□□ -0.26
PTPN11-205ENST00000635625 RASGEF1CQ8N431 466 aa13.44□□□□□ -0.26
PTPN11-205ENST00000635625 U2AF1L4Q8WU68 220 aaKnown RBP13.44□□□□□ -0.26
PTPN11-205ENST00000635625 CDHR1Q96JP9 859 aa13.44□□□□□ -0.26
PTPN11-205ENST00000635625 RUFY1Q96T51 708 aa13.44□□□□□ -0.26
PTPN11-205ENST00000635625 NAP1L3Q99457 506 aaPredicted RBP13.44□□□□□ -0.26
PTPN11-205ENST00000635625 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.44□□□□□ -0.261e-6■□□□□ 8.5
PTPN11-205ENST00000635625 SLITRK6Q9H5Y7 841 aa13.44□□□□□ -0.26
PTPN11-205ENST00000635625 STXBP5LQ9Y2K9 1186 aa13.44□□□□□ -0.26
PTPN11-205ENST00000635625 SAMM50Q9Y512 469 aa13.44□□□□□ -0.26
PTPN11-205ENST00000635625 H0YCG3 227 aa13.43□□□□□ -0.26
PTPN11-205ENST00000635625 TULP1O00294 542 aaPredicted RBP13.43□□□□□ -0.26
PTPN11-205ENST00000635625 KCNK3O14649 394 aa13.43□□□□□ -0.26
PTPN11-205ENST00000635625 ZBTB39O15060 712 aa13.43□□□□□ -0.26
PTPN11-205ENST00000635625 HSF2BPO75031 334 aa13.43□□□□□ -0.26
PTPN11-205ENST00000635625 MYBL2P10244 700 aa13.43□□□□□ -0.26
PTPN11-205ENST00000635625 VCAM1P19320 739 aa13.43□□□□□ -0.26
PTPN11-205ENST00000635625 ACTN2P35609 894 aa13.43□□□□□ -0.26
PTPN11-205ENST00000635625 MATR3P43243 847 aaKnown RBP eCLIP13.43□□□□□ -0.26
PTPN11-205ENST00000635625 LMAN1P49257 510 aa13.43□□□□□ -0.26
PTPN11-205ENST00000635625 VAMP7P51809 220 aa13.43□□□□□ -0.26
PTPN11-205ENST00000635625 SMTNP53814 917 aa13.43□□□□□ -0.26
PTPN11-205ENST00000635625 COG2Q14746 738 aa13.43□□□□□ -0.26
PTPN11-205ENST00000635625 RNF207Q6ZRF8 634 aa13.43□□□□□ -0.26
PTPN11-205ENST00000635625 RHOT2Q8IXI1 618 aa13.43□□□□□ -0.26
PTPN11-205ENST00000635625 PLPP6Q8IY26 295 aa13.43□□□□□ -0.26
PTPN11-205ENST00000635625 IL31RAQ8NI17 732 aa13.43□□□□□ -0.26
PTPN11-205ENST00000635625 KIFAP3Q92845 792 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms