RNA–Protein interactions for RNA: ENST00000635058.2

RHOXF1P3-201, Transcript of Rhox homeobox family member 1 pseudogene 3, humanhuman

BASIC

Gene RHOXF1P3, Length 502 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHOXF1P3-201ENST00000635058 NPEPPSP55786 919 aa11.15□□□□□ -0.62
RHOXF1P3-201ENST00000635058 LONRF3Q496Y0 759 aa11.15□□□□□ -0.62
RHOXF1P3-201ENST00000635058 XKR9Q5GH70 373 aa11.15□□□□□ -0.62
RHOXF1P3-201ENST00000635058 NOMO2Q5JPE7 1267 aa11.15□□□□□ -0.62
RHOXF1P3-201ENST00000635058 PLA2G4FQ68DD2 849 aa11.15□□□□□ -0.62
RHOXF1P3-201ENST00000635058 NCAPH2Q6IBW4 605 aa11.15□□□□□ -0.62
RHOXF1P3-201ENST00000635058 ANKRD54Q6NXT1 300 aa11.15□□□□□ -0.62
RHOXF1P3-201ENST00000635058 KSR1Q8IVT5 923 aa11.15□□□□□ -0.62
RHOXF1P3-201ENST00000635058 TPH2Q8IWU9 490 aa11.15□□□□□ -0.62
RHOXF1P3-201ENST00000635058 SLC39A11Q8N1S5 342 aa11.15□□□□□ -0.62
RHOXF1P3-201ENST00000635058 URGCPQ8TCY9 931 aa11.15□□□□□ -0.62
RHOXF1P3-201ENST00000635058 PRPF31Q8WWY3 499 aaKnown RBP11.15□□□□□ -0.62
RHOXF1P3-201ENST00000635058 CCDC43Q96MW1 224 aaKnown RBP11.15□□□□□ -0.62
RHOXF1P3-201ENST00000635058 CEP89Q96ST8 783 aa11.15□□□□□ -0.62
RHOXF1P3-201ENST00000635058 FAM105AQ9NUU6 356 aa11.15□□□□□ -0.62
RHOXF1P3-201ENST00000635058 PPP4R2Q9NY27 417 aa11.15□□□□□ -0.62
RHOXF1P3-201ENST00000635058 KANSL3Q9P2N6 904 aa11.15□□□□□ -0.62
RHOXF1P3-201ENST00000635058 VAV3Q9UKW4 847 aa11.15□□□□□ -0.62
RHOXF1P3-201ENST00000635058 PCDHA12Q9UN75 941 aa11.15□□□□□ -0.62
RHOXF1P3-201ENST00000635058 NR2E1Q9Y466 385 aa11.15□□□□□ -0.62
RHOXF1P3-201ENST00000635058 GTF3C3Q9Y5Q9 886 aa11.15□□□□□ -0.62
RHOXF1P3-201ENST00000635058 NLRC5Q86WI3 1866 aa11.15□□□□□ -0.63
RHOXF1P3-201ENST00000635058 NT5C1B-RDH14C9J2C7 533 aa11.14□□□□□ -0.63
RHOXF1P3-201ENST00000635058 ALDH2P05091 517 aa11.14□□□□□ -0.63
RHOXF1P3-201ENST00000635058 AK2P54819 239 aa11.14□□□□□ -0.63
RHOXF1P3-201ENST00000635058 ITIH3Q06033 890 aa11.14□□□□□ -0.63
RHOXF1P3-201ENST00000635058 LAMTOR4Q0VGL1 99 aa11.14□□□□□ -0.63
RHOXF1P3-201ENST00000635058 MXD4Q14582 209 aaPredicted RBP11.14□□□□□ -0.63
RHOXF1P3-201ENST00000635058 CBX2Q14781 532 aaPredicted RBP11.14□□□□□ -0.63
RHOXF1P3-201ENST00000635058 PCBP1Q15365 356 aaKnown RBP eCLIP11.14□□□□□ -0.63
RHOXF1P3-201ENST00000635058 ZBTB33Q86T24 672 aa11.14□□□□□ -0.63
RHOXF1P3-201ENST00000635058 VPS52Q8N1B4 723 aa11.14□□□□□ -0.63
RHOXF1P3-201ENST00000635058 CNNM3Q8NE01 707 aa11.14□□□□□ -0.63
RHOXF1P3-201ENST00000635058 VN1R2Q8NFZ6 395 aa11.14□□□□□ -0.63
RHOXF1P3-201ENST00000635058 OXER1Q8TDS5 423 aa11.14□□□□□ -0.63
RHOXF1P3-201ENST00000635058 SUSD6Q92537 303 aa11.14□□□□□ -0.63
RHOXF1P3-201ENST00000635058 HAS1Q92839 578 aa11.14□□□□□ -0.63
RHOXF1P3-201ENST00000635058 TMEM143Q96AN5 459 aa11.14□□□□□ -0.63
RHOXF1P3-201ENST00000635058 FAM193BQ96PV7 902 aaPredicted RBP11.14□□□□□ -0.63
RHOXF1P3-201ENST00000635058 LXNQ9BS40 222 aa11.14□□□□□ -0.63
RHOXF1P3-201ENST00000635058 DHX33Q9H6R0 707 aaKnown RBP11.14□□□□□ -0.63
RHOXF1P3-201ENST00000635058 IFT122Q9HBG6 1241 aa11.14□□□□□ -0.63
RHOXF1P3-201ENST00000635058 UBN1Q9NPG3 1134 aa11.14□□□□□ -0.63
RHOXF1P3-201ENST00000635058 INPP5FQ9Y2H2 1132 aa11.14□□□□□ -0.63
RHOXF1P3-201ENST00000635058 PCDHB2Q9Y5E7 798 aa11.14□□□□□ -0.63
RHOXF1P3-201ENST00000635058 C2orf71A6NGG8 1288 aa11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 OFD1O75665 1012 aa11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 ERLIN2O94905 339 aa11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 ZXDAP98168 799 aa11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 RBM10P98175 930 aaKnown RBP11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 KCNC3Q14003 757 aa11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 TFDP1Q14186 410 aa11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 CALCRLQ16602 461 aa11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 ERICH6BQ5W0A0 696 aa11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 TRIM67Q6ZTA4 783 aa11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 HFE2Q6ZVN8 426 aa11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 DDX53Q86TM3 631 aaKnown RBP11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 POTEDQ86YR6 584 aa11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 SUGP1Q8IWZ8 645 aaKnown RBP11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 RNF149Q8NC42 400 aa11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 LPPQ93052 612 aa11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 PBXIP1Q96AQ6 731 aa11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 DYDC2Q96IM9 177 aa11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 RIPOR3Q96MK2 946 aa11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 NECTIN4Q96NY8 510 aa11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 MTRQ99707 1265 aa11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 APOL5Q9BWW9 433 aa11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 GBP3Q9H0R5 595 aa11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 S1PR5Q9H228 398 aa11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 GJB4Q9NTQ9 266 aa11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 AGPAT5Q9NUQ2 364 aa11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 TBC1D13Q9NVG8 400 aa11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 RGL1Q9NZL6 768 aa11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 EVPLQ92817 2033 aa11.13□□□□□ -0.63
RHOXF1P3-201ENST00000635058 CNTNAP2Q9UHC6 1331 aa11.12□□□□□ -0.63
RHOXF1P3-201ENST00000635058 MYH9P35579 1960 aaKnown RBP11.12□□□□□ -0.63
RHOXF1P3-201ENST00000635058 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.12□□□□□ -0.63
RHOXF1P3-201ENST00000635058 TMEM221A6NGB7 291 aa11.12□□□□□ -0.63
RHOXF1P3-201ENST00000635058 SPDYE4A6NLX3 237 aa11.12□□□□□ -0.63
RHOXF1P3-201ENST00000635058 M0R296 226 aa11.12□□□□□ -0.63
RHOXF1P3-201ENST00000635058 CLASP2O75122 1294 aaKnown RBP11.12□□□□□ -0.63
RHOXF1P3-201ENST00000635058 NR1I2O75469 434 aa11.12□□□□□ -0.63
RHOXF1P3-201ENST00000635058 SLITRK3O94933 977 aa11.12□□□□□ -0.63
RHOXF1P3-201ENST00000635058 CTDNEP1O95476 244 aa11.12□□□□□ -0.63
RHOXF1P3-201ENST00000635058 GALTP07902 379 aa11.12□□□□□ -0.63
RHOXF1P3-201ENST00000635058 AXLP30530 894 aa11.12□□□□□ -0.63
RHOXF1P3-201ENST00000635058 HOXD11P31277 338 aaPredicted RBP11.12□□□□□ -0.63
RHOXF1P3-201ENST00000635058 MTHFRP42898 656 aa11.12□□□□□ -0.63
RHOXF1P3-201ENST00000635058 NEK4P51957 841 aa11.12□□□□□ -0.63
RHOXF1P3-201ENST00000635058 CYP4A11Q02928 519 aa11.12□□□□□ -0.63
RHOXF1P3-201ENST00000635058 NR5A1Q13285 461 aa11.12□□□□□ -0.63
RHOXF1P3-201ENST00000635058 CTTNQ14247 550 aaKnown RBP11.12□□□□□ -0.63
RHOXF1P3-201ENST00000635058 EMC2Q15006 297 aa11.12□□□□□ -0.63
RHOXF1P3-201ENST00000635058 SAFBQ15424 915 aaKnown RBP eCLIP11.12□□□□□ -0.63
RHOXF1P3-201ENST00000635058 ATAT1Q5SQI0 421 aa11.12□□□□□ -0.63
RHOXF1P3-201ENST00000635058 SYCE2Q6PIF2 218 aa11.12□□□□□ -0.63
RHOXF1P3-201ENST00000635058 BMP8AQ7Z5Y6 402 aa11.12□□□□□ -0.63
RHOXF1P3-201ENST00000635058 MRPL10Q7Z7H8 261 aaKnown RBP11.12□□□□□ -0.63
RHOXF1P3-201ENST00000635058 FERMT3Q86UX7 667 aa11.12□□□□□ -0.63
RHOXF1P3-201ENST00000635058 PPFIBP1Q86W92 1011 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms