RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 NT5C3AQ9H0P0 336 aa17.4■□□□□ 0.38
LINC00339-207ENST00000634712 FAM105AQ9NUU6 356 aa17.4■□□□□ 0.38
LINC00339-207ENST00000634712 TYW1Q9NV66 732 aaKnown RBP17.4■□□□□ 0.38
LINC00339-207ENST00000634712 NLRC5Q86WI3 1866 aa17.39■□□□□ 0.37
LINC00339-207ENST00000634712 E9PMD0 336 aa17.39■□□□□ 0.37
LINC00339-207ENST00000634712 STX6O43752 255 aa17.39■□□□□ 0.37
LINC00339-207ENST00000634712 EYA4O95677 639 aa17.39■□□□□ 0.37
LINC00339-207ENST00000634712 IFNLR1Q8IU57 520 aaPredicted RBP17.39■□□□□ 0.37
LINC00339-207ENST00000634712 P2RX5Q93086 422 aa17.39■□□□□ 0.37
LINC00339-207ENST00000634712 IFT74Q96LB3 600 aa17.39■□□□□ 0.37
LINC00339-207ENST00000634712 AK8Q96MA6 479 aa17.39■□□□□ 0.37
LINC00339-207ENST00000634712 CASD1Q96PB1 797 aa17.39■□□□□ 0.37
LINC00339-207ENST00000634712 NFKBIZQ9BYH8 718 aa17.39■□□□□ 0.37
LINC00339-207ENST00000634712 LMAN2LQ9H0V9 348 aa17.39■□□□□ 0.37
LINC00339-207ENST00000634712 ZSCAN16Q9H4T2 348 aaPredicted RBP17.39■□□□□ 0.37
LINC00339-207ENST00000634712 RALGAPA2Q2PPJ7 1873 aa17.38■□□□□ 0.37
LINC00339-207ENST00000634712 LINC00271P0C7V0 271 aa17.38■□□□□ 0.37
LINC00339-207ENST00000634712 UBA7P41226 1012 aa17.38■□□□□ 0.37
LINC00339-207ENST00000634712 PPP2R5AQ15172 486 aa17.38■□□□□ 0.37
LINC00339-207ENST00000634712 LONRF3Q496Y0 759 aa17.38■□□□□ 0.37
LINC00339-207ENST00000634712 NOTUMQ6P988 496 aa17.38■□□□□ 0.37
LINC00339-207ENST00000634712 ZNF598Q86UK7 904 aaKnown RBP17.38■□□□□ 0.37
LINC00339-207ENST00000634712 CABP7Q86V35 215 aa17.38■□□□□ 0.37
LINC00339-207ENST00000634712 LRRC43Q8N309 656 aa17.38■□□□□ 0.37
LINC00339-207ENST00000634712 KCTD17Q8N5Z5 321 aa17.38■□□□□ 0.37
LINC00339-207ENST00000634712 RASSF8Q8NHQ8 419 aa17.38■□□□□ 0.37
LINC00339-207ENST00000634712 HELQQ8TDG4 1101 aa17.38■□□□□ 0.37
LINC00339-207ENST00000634712 KIFAP3Q92845 792 aa17.38■□□□□ 0.37
LINC00339-207ENST00000634712 CALML4Q96GE6 196 aa17.38■□□□□ 0.37
LINC00339-207ENST00000634712 MMTAG2Q9BU76 263 aaKnown RBP17.38■□□□□ 0.37
LINC00339-207ENST00000634712 C2orf40Q9H1Z8 148 aa17.38■□□□□ 0.37
LINC00339-207ENST00000634712 PRDM6Q9NQX0 595 aa17.38■□□□□ 0.37
LINC00339-207ENST00000634712 THEGQ9P2T0 379 aa17.38■□□□□ 0.37
LINC00339-207ENST00000634712 PLAGL2Q9UPG8 496 aa17.38■□□□□ 0.37
LINC00339-207ENST00000634712 PCDHB2Q9Y5E7 798 aa17.38■□□□□ 0.37
LINC00339-207ENST00000634712 PRUNE2Q8WUY3 3088 aa17.37■□□□□ 0.37
LINC00339-207ENST00000634712 COL4A4P53420 1690 aaPredicted RBP17.37■□□□□ 0.37
LINC00339-207ENST00000634712 GRM6O15303 877 aa17.37■□□□□ 0.37
LINC00339-207ENST00000634712 ZNF623O75123 536 aa17.37■□□□□ 0.37
LINC00339-207ENST00000634712 SSBP05455 408 aaKnown RBP eCLIP17.37■□□□□ 0.37
LINC00339-207ENST00000634712 LAG3P18627 525 aa17.37■□□□□ 0.37
LINC00339-207ENST00000634712 HOXA11P31270 313 aaPredicted RBP17.37■□□□□ 0.37
LINC00339-207ENST00000634712 MBTD1Q05BQ5 628 aa17.37■□□□□ 0.37
LINC00339-207ENST00000634712 RESTQ13127 1097 aa17.37■□□□□ 0.37
LINC00339-207ENST00000634712 CSPP1Q1MSJ5 1256 aa17.37■□□□□ 0.37
LINC00339-207ENST00000634712 TMEM132AQ24JP5 1023 aa17.37■□□□□ 0.37
LINC00339-207ENST00000634712 TIGD5Q53EQ6 642 aa17.37■□□□□ 0.37
LINC00339-207ENST00000634712 GLB1LQ6UWU2 654 aa17.37■□□□□ 0.37
LINC00339-207ENST00000634712 THNSL1Q8IYQ7 743 aa17.37■□□□□ 0.37
LINC00339-207ENST00000634712 KLHL23Q8NBE8 558 aa17.37■□□□□ 0.37
LINC00339-207ENST00000634712 CNNM3Q8NE01 707 aa17.37■□□□□ 0.37
LINC00339-207ENST00000634712 DEPTORQ8TB45 409 aa17.37■□□□□ 0.37
LINC00339-207ENST00000634712 RSPH1Q8WYR4 309 aa17.37■□□□□ 0.37
LINC00339-207ENST00000634712 LPPQ93052 612 aa17.37■□□□□ 0.37
LINC00339-207ENST00000634712 CCDC51Q96ER9 411 aa17.37■□□□□ 0.37
LINC00339-207ENST00000634712 CPB2Q96IY4 423 aa17.37■□□□□ 0.37
LINC00339-207ENST00000634712 PLIN2Q99541 437 aa17.37■□□□□ 0.37
LINC00339-207ENST00000634712 MRPL9Q9BYD2 267 aaKnown RBP17.37■□□□□ 0.37
LINC00339-207ENST00000634712 ALG13Q9NP73 1137 aaKnown RBP17.37■□□□□ 0.37
LINC00339-207ENST00000634712 MTMR6Q9Y217 621 aa17.37■□□□□ 0.37
LINC00339-207ENST00000634712 FNDC1Q4ZHG4 1894 aaPredicted RBP17.37■□□□□ 0.37
LINC00339-207ENST00000634712 TSPAN1O60635 241 aa17.36■□□□□ 0.37
LINC00339-207ENST00000634712 PDIA4P13667 645 aaKnown RBP17.36■□□□□ 0.37
LINC00339-207ENST00000634712 ATF7P17544 494 aaPredicted RBP17.36■□□□□ 0.37
LINC00339-207ENST00000634712 LONP1P36776 959 aaKnown RBP17.36■□□□□ 0.37
LINC00339-207ENST00000634712 NAMPTP43490 491 aa17.36■□□□□ 0.37
LINC00339-207ENST00000634712 CEBPZQ03701 1054 aaKnown RBP17.36■□□□□ 0.37
LINC00339-207ENST00000634712 CLLU1OSQ5K130 101 aa17.36■□□□□ 0.37
LINC00339-207ENST00000634712 HYIQ5T013 277 aa17.36■□□□□ 0.37
LINC00339-207ENST00000634712 COLGALT1Q8NBJ5 622 aa17.36■□□□□ 0.37
LINC00339-207ENST00000634712 ATXN2LQ8WWM7 1075 aaKnown RBP17.36■□□□□ 0.37
LINC00339-207ENST00000634712 TRIM6Q9C030 488 aaPredicted RBP17.36■□□□□ 0.37
LINC00339-207ENST00000634712 POLD4Q9HCU8 107 aa17.36■□□□□ 0.37
LINC00339-207ENST00000634712 RNF19AQ9NV58 838 aa17.36■□□□□ 0.37
LINC00339-207ENST00000634712 PRMT7Q9NVM4 692 aaPredicted RBP17.36■□□□□ 0.37
LINC00339-207ENST00000634712 COG5Q9UP83 839 aa17.36■□□□□ 0.37
LINC00339-207ENST00000634712 CLIC4Q9Y696 253 aa17.36■□□□□ 0.37
LINC00339-207ENST00000634712 SLC26A4O43511 780 aa17.35■□□□□ 0.37
LINC00339-207ENST00000634712 CSPG5O95196 566 aa17.35■□□□□ 0.37
LINC00339-207ENST00000634712 ITGB1P05556 798 aa17.35■□□□□ 0.37
LINC00339-207ENST00000634712 LIG1P18858 919 aa17.35■□□□□ 0.37
LINC00339-207ENST00000634712 MRPS5P82675 430 aaKnown RBP17.35■□□□□ 0.37
LINC00339-207ENST00000634712 MAPK6Q16659 721 aa17.35■□□□□ 0.37
LINC00339-207ENST00000634712 FAM173BQ6P4H8 233 aa17.35■□□□□ 0.37
LINC00339-207ENST00000634712 HACE1Q8IYU2 909 aa17.35■□□□□ 0.37
LINC00339-207ENST00000634712 SPPL3Q8TCT6 385 aa17.35■□□□□ 0.37
LINC00339-207ENST00000634712 HLA-CQ95604 372 aa17.35■□□□□ 0.37
LINC00339-207ENST00000634712 DRC1Q96MC2 740 aa17.35■□□□□ 0.37
LINC00339-207ENST00000634712 CSRNP2Q9H175 543 aa17.35■□□□□ 0.37
LINC00339-207ENST00000634712 NSUN3Q9H649 340 aaKnown RBP17.35■□□□□ 0.37
LINC00339-207ENST00000634712 CWH43Q9H720 699 aa17.35■□□□□ 0.37
LINC00339-207ENST00000634712 UBN1Q9NPG3 1134 aa17.35■□□□□ 0.37
LINC00339-207ENST00000634712 INPP5FQ9Y2H2 1132 aa17.35■□□□□ 0.37
LINC00339-207ENST00000634712 ITGA4P13612 1032 aa17.34■□□□□ 0.37
LINC00339-207ENST00000634712 ARF4P18085 180 aaPredicted RBP17.34■□□□□ 0.37
LINC00339-207ENST00000634712 RNASELQ05823 741 aaKnown RBP17.34■□□□□ 0.37
LINC00339-207ENST00000634712 AAK1Q2M2I8 961 aa17.34■□□□□ 0.37
LINC00339-207ENST00000634712 NOMO2Q5JPE7 1267 aa17.34■□□□□ 0.37
LINC00339-207ENST00000634712 CDCA2Q69YH5 1023 aaPredicted RBP17.34■□□□□ 0.37
LINC00339-207ENST00000634712 RINT1Q6NUQ1 792 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms