RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 F13A1P00488 732 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 F2P00734 622 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 SP100P23497 879 aaPredicted RBP5.48□□□□□ -1.53
LINC00550-201ENST00000629293 ERVK-21P61565 698 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 TRDNQ13061 729 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 PTPROQ16827 1216 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 ASPRV1Q53RT3 343 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 DGKHQ86XP1 1220 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 PPTC7Q8NI37 304 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 SNX29Q8TEQ0 813 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 SEPT8Q92599 483 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 ANKS1AQ92625 1134 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 PIGSQ96S52 555 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 FAM49AQ9H0Q0 323 aaPredicted RBP5.48□□□□□ -1.53
LINC00550-201ENST00000629293 TCP11L1Q9NUJ3 509 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 CYP46A1Q9Y6A2 500 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 TECTAO75443 2155 aa5.48□□□□□ -1.53
LINC00550-201ENST00000629293 EPG5Q9HCE0 2579 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 GPR179Q6PRD1 2367 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 CACNA1BQ00975 2339 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 GADD45BO75293 160 aaPredicted RBP5.47□□□□□ -1.53
LINC00550-201ENST00000629293 PPFIA4O75335 1185 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 SMIM10L2AP0DMW4 78 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 SMIM10L2BP0DMW5 78 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 SNHG28P0DPA3 235 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 SP2Q02086 613 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 NNTQ13423 1086 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 COL9A3Q14050 684 aaPredicted RBP5.47□□□□□ -1.53
LINC00550-201ENST00000629293 PAN2Q504Q3 1202 aaKnown RBP5.47□□□□□ -1.53
LINC00550-201ENST00000629293 PDE12Q6L8Q7 609 aaKnown RBP5.47□□□□□ -1.53
LINC00550-201ENST00000629293 RBM23Q86U06 439 aaKnown RBP5.47□□□□□ -1.53
LINC00550-201ENST00000629293 RAB11FIP4Q86YS3 637 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 IWS1Q96ST2 819 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 RSRP1Q9BUV0 290 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 PGPEP1Q9NXJ5 209 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 MTMR6Q9Y217 621 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 LOC102724159A0A0B4J2E5 919 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 ERICH2A1L162 156 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 GCOM1H8Y6P7 765 aaPredicted RBP5.47□□□□□ -1.53
LINC00550-201ENST00000629293 IFIT3O14879 490 aaKnown RBP5.47□□□□□ -1.53
LINC00550-201ENST00000629293 EREGO14944 169 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 RGS20O76081 388 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 LGALS2P05162 132 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 POLR2MP0CAP2 368 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 HSD3B2P26439 372 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 CCND2P30279 289 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 TMEM62Q0P6H9 643 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 PWP2Q15269 919 aaKnown RBP5.47□□□□□ -1.53
LINC00550-201ENST00000629293 ME3Q16798 604 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 CELF3Q5SZQ8 465 aaKnown RBP5.47□□□□□ -1.53
LINC00550-201ENST00000629293 ZBTB10Q96DT7 871 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 TRIM44Q96DX7 344 aaPredicted RBP5.47□□□□□ -1.53
LINC00550-201ENST00000629293 NIFKQ9BYG3 293 aaKnown RBP5.47□□□□□ -1.53
LINC00550-201ENST00000629293 ALG13Q9NP73 1137 aaKnown RBP5.47□□□□□ -1.53
LINC00550-201ENST00000629293 TPCN1Q9ULQ1 816 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 SMC3Q9UQE7 1217 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 MSRB2Q9Y3D2 182 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 TELO2Q9Y4R8 837 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 ZNF318Q5VUA4 2279 aa5.47□□□□□ -1.53
LINC00550-201ENST00000629293 hCG_1642624A0A1W2PR95 340 aa5.46□□□□□ -1.53
LINC00550-201ENST00000629293 EFCAB14O75071 495 aa5.46□□□□□ -1.53
LINC00550-201ENST00000629293 CXCL10P02778 98 aa5.46□□□□□ -1.53
LINC00550-201ENST00000629293 POU3F3P20264 500 aaPredicted RBP5.46□□□□□ -1.53
LINC00550-201ENST00000629293 RNF144AP50876 292 aaPredicted RBP5.46□□□□□ -1.53
LINC00550-201ENST00000629293 PGM5Q15124 567 aa5.46□□□□□ -1.53
LINC00550-201ENST00000629293 RALYLQ86SE5 291 aaKnown RBP5.46□□□□□ -1.53
LINC00550-201ENST00000629293 TICAM2Q86XR7 235 aa5.46□□□□□ -1.53
LINC00550-201ENST00000629293 CCDC83Q8IWF9 413 aa5.46□□□□□ -1.53
LINC00550-201ENST00000629293 TMEM192Q8IY95 271 aa5.46□□□□□ -1.53
LINC00550-201ENST00000629293 C1orf127Q8N9H9 656 aa5.46□□□□□ -1.53
LINC00550-201ENST00000629293 MICAL1Q8TDZ2 1067 aa5.46□□□□□ -1.53
LINC00550-201ENST00000629293 GLG1Q92896 1179 aa5.46□□□□□ -1.53
LINC00550-201ENST00000629293 SYAP1Q96A49 352 aaPredicted RBP5.46□□□□□ -1.53
LINC00550-201ENST00000629293 MRPL38Q96DV4 380 aaKnown RBP5.46□□□□□ -1.53
LINC00550-201ENST00000629293 SEC16BQ96JE7 1060 aa5.46□□□□□ -1.53
LINC00550-201ENST00000629293 MYL10Q9BUA6 226 aa5.46□□□□□ -1.53
LINC00550-201ENST00000629293 ZFAND3Q9H8U3 227 aa5.46□□□□□ -1.53
LINC00550-201ENST00000629293 CTNNA3Q9UI47 895 aa5.46□□□□□ -1.53
LINC00550-201ENST00000629293 TAF6LQ9Y6J9 622 aa5.46□□□□□ -1.53
LINC00550-201ENST00000629293 LAMA4Q16363 1823 aa5.46□□□□□ -1.53
LINC00550-201ENST00000629293 EMSYQ7Z589 1322 aa5.46□□□□□ -1.53
LINC00550-201ENST00000629293 ZBTB5O15062 677 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 DCXO43602 365 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 GREM1O60565 184 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 PPP1R11O60927 126 aaPredicted RBP5.46□□□□□ -1.54
LINC00550-201ENST00000629293 PARNO95453 639 aaKnown RBP5.46□□□□□ -1.54
LINC00550-201ENST00000629293 ALADP13716 330 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 TIMP2P16035 220 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 RPS6KB1P23443 525 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 PSMA5P28066 241 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 GJB2P29033 226 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 NOVP48745 357 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 NDUFV1P49821 464 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 IDH3AP50213 366 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 BTG3Q14201 252 aaPredicted RBP5.46□□□□□ -1.54
LINC00550-201ENST00000629293 GNPTABQ3T906 1256 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 SPOUT1Q5T280 376 aaKnown RBP5.46□□□□□ -1.54
LINC00550-201ENST00000629293 USP17L6PQ6QN14 398 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 ZSCAN30Q86W11 494 aa5.46□□□□□ -1.54
LINC00550-201ENST00000629293 FIBCD1Q8N539 461 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms