RNA–Protein interactions for RNA: ENST00000629047.1

SPTAN1-216, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-216ENST00000629047 USP33Q8TEY7 942 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 ZFAND2BQ8WV99 257 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 RUFY2Q8WXA3 655 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 CTNNBL1Q8WYA6 563 aaPredicted RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 USP6NLQ92738 828 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 OPTNQ96CV9 577 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 IQCDQ96DY2 449 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 CDK5RAP3Q96JB5 506 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 EAF1Q96JC9 268 aaPredicted RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 FAM81BQ96LP2 452 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 DMRTB1Q96MA1 342 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 GBP5Q96PP8 586 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 RAB3IPQ96QF0 476 aaPredicted RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 CITED4Q96RK1 184 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 GORASP1Q9BQQ3 440 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 NAA15Q9BXJ9 866 aaKnown RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 MAK16Q9BXY0 300 aaKnown RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 FUT8Q9BYC5 575 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 UBXN6Q9BZV1 441 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 TSGA10Q9BZW7 698 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 API5Q9BZZ5 524 aaKnown RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 SRCIN1Q9C0H9 1055 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 YIPF3Q9GZM5 350 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 RNF38Q9H0F5 515 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 NSRP1Q9H0G5 558 aaKnown RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 OSBPL5Q9H0X9 879 aaPredicted RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 ASCC2Q9H1I8 757 aaPredicted RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 TAOK3Q9H2K8 898 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 MMADHCQ9H3L0 296 aaPredicted RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 CLSTN2Q9H4D0 955 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 VCPKMTQ9H867 229 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 ZCCHC17Q9NP64 241 aaKnown RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 HYPKQ9NX55 129 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 MIS18AQ9NYP9 233 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 CTTNBP2NLQ9P2B4 639 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 MYO1AQ9UBC5 1043 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 CIDEBQ9UHD4 219 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 SCOCQ9UIL1 159 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 BLOC1S6Q9UL45 172 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 LIMCH1Q9UPQ0 1083 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 ZFR2Q9UPR6 939 aaKnown RBP2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 CNPY2Q9Y2B0 182 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 ATP8A1Q9Y2Q0 1164 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 GMEB1Q9Y692 573 aa2.28□□□□□ -2.04
SPTAN1-216ENST00000629047 TOP2BQ02880 1626 aa2.28□□□□□ -2.05
SPTAN1-216ENST00000629047 SYNMO15061 1565 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 KDM5CP41229 1560 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 CFAP74Q9C0B2 1584 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 GRIN2AQ12879 1464 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 GAPVD1Q14C86 1478 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 SNAPC4Q5SXM2 1469 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 RGS12O14924 1447 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 PTPRGP23470 1445 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 ERBINQ96RT1 1412 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 CADPSQ9ULU8 1353 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 A0A1W2PQ45 241 aaPredicted RBP2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 A0A1W2PQY0 241 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 TARSL2A2RTX5 802 aaKnown RBP2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 GOLGA8AA7E2F4 631 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 FYB1O15117 783 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 CETN3O15182 167 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 ZEB2O60315 1214 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 KDM1AO60341 852 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 STX10O60499 249 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 SHOX2O60902 331 aaPredicted RBP2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 HIP1RO75146 1068 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 KRT38O76015 456 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 ZNF205O95201 554 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 LMNAP02545 664 aaKnown RBP2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 SSBP05455 408 aaKnown RBP eCLIP2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 MYL1P05976 194 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 PARP1P09874 1014 aaKnown RBP2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 TSPY4P0CV99 314 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 TSPY10P0CW01 314 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 HARSP12081 509 aaKnown RBP2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 ZKSCAN1P17029 563 aaPredicted RBP2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 CCND1P24385 295 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 PSMA5P28066 241 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 PIP4K2AP48426 406 aaPredicted RBP2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 CTCFP49711 727 aaPredicted RBP2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 VAV2P52735 878 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 YARSP54577 528 aaKnown RBP2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 KRTAP10-11P60412 298 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 TUBA4AP68366 448 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 ATP2B2Q01814 1243 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 FOXE3Q13461 319 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 KRT72Q14CN4 511 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 E2F5Q15329 346 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 TAF11Q15544 211 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 TAF7Q15545 349 aaPredicted RBP2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 CAMK4Q16566 473 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 IMMTQ16891 758 aaKnown RBP2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 GNPTABQ3T906 1256 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 CFAP100Q494V2 611 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 USH1GQ495M9 461 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 ODF2Q5BJF6 829 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 GKAP1Q5VSY0 366 aaPredicted RBP2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 LARP1BQ659C4 914 aaKnown RBP2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 ATL3Q6DD88 541 aa2.27□□□□□ -2.05
SPTAN1-216ENST00000629047 DPY19L2P1Q6NXN4 242 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms