RNA–Protein interactions for RNA: ENST00000627685.2

TCF4-260, Transcript of transcription factor 4, humanhuman

TSL 5

Gene TCF4, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-260ENST00000627685 TUBE1Q9UJT0 475 aa8.65□□□□□ -1.02
TCF4-260ENST00000627685 PCDHA11Q9Y5I1 949 aa8.65□□□□□ -1.02
TCF4-260ENST00000627685 TRANK1O15050 2925 aa8.64□□□□□ -1.03
TCF4-260ENST00000627685 KDM3AQ9Y4C1 1321 aa8.64□□□□□ -1.03
TCF4-260ENST00000627685 KIF28PB7ZC32 967 aa8.64□□□□□ -1.03
TCF4-260ENST00000627685 EFCAB14O75071 495 aa8.64□□□□□ -1.03
TCF4-260ENST00000627685 F11P03951 625 aa8.64□□□□□ -1.03
TCF4-260ENST00000627685 MMP1P03956 469 aa8.64□□□□□ -1.03
TCF4-260ENST00000627685 GNAT1P11488 350 aa8.64□□□□□ -1.03
TCF4-260ENST00000627685 ATP2A2P16615 1042 aaKnown RBP8.64□□□□□ -1.03
TCF4-260ENST00000627685 SMTNP53814 917 aa8.64□□□□□ -1.03
TCF4-260ENST00000627685 NLRP5P59047 1200 aa8.64□□□□□ -1.03
TCF4-260ENST00000627685 TAP1Q03518 808 aa8.64□□□□□ -1.03
TCF4-260ENST00000627685 DRP2Q13474 957 aa8.64□□□□□ -1.03
TCF4-260ENST00000627685 RNFT1Q5M7Z0 435 aa8.64□□□□□ -1.03
TCF4-260ENST00000627685 GALNT17Q6IS24 598 aa8.64□□□□□ -1.03
TCF4-260ENST00000627685 CNKSR3Q6P9H4 555 aa8.64□□□□□ -1.03
TCF4-260ENST00000627685 HERC6Q8IVU3 1022 aa8.64□□□□□ -1.03
TCF4-260ENST00000627685 RHBDD1Q8TEB9 315 aa8.64□□□□□ -1.03
TCF4-260ENST00000627685 ATP8B4Q8TF62 1192 aa8.64□□□□□ -1.03
TCF4-260ENST00000627685 MYLIPQ8WY64 445 aa8.64□□□□□ -1.03
TCF4-260ENST00000627685 ZNF837Q96EG3 531 aaPredicted RBP8.64□□□□□ -1.03
TCF4-260ENST00000627685 RIT2Q99578 217 aa8.64□□□□□ -1.03
TCF4-260ENST00000627685 ZNF577Q9BSK1 485 aa8.64□□□□□ -1.03
TCF4-260ENST00000627685 NKX2-4Q9H2Z4 354 aa8.64□□□□□ -1.03
TCF4-260ENST00000627685 TMX1Q9H3N1 280 aa8.64□□□□□ -1.03
TCF4-260ENST00000627685 SMARCAD1Q9H4L7 1026 aa8.64□□□□□ -1.03
TCF4-260ENST00000627685 ZNF215Q9UL58 517 aaPredicted RBP8.64□□□□□ -1.03
TCF4-260ENST00000627685 UNC80Q8N2C7 3258 aa8.64□□□□□ -1.03
TCF4-260ENST00000627685 TTC28Q96AY4 2481 aa8.63□□□□□ -1.03
TCF4-260ENST00000627685 COL1A2P08123 1366 aa8.63□□□□□ -1.03
TCF4-260ENST00000627685 ABHD14A-ACY1A0A1B0GW23 586 aa8.63□□□□□ -1.03
TCF4-260ENST00000627685 RSPH10B2B2RC85 870 aa8.63□□□□□ -1.03
TCF4-260ENST00000627685 BTBD18B2RXH4 712 aa8.63□□□□□ -1.03
TCF4-260ENST00000627685 CPLX1O14810 134 aa8.63□□□□□ -1.03
TCF4-260ENST00000627685 CA3P07451 260 aa8.63□□□□□ -1.03
TCF4-260ENST00000627685 RSPH10BP0C881 870 aa8.63□□□□□ -1.03
TCF4-260ENST00000627685 FOSL2P15408 326 aa8.63□□□□□ -1.03
TCF4-260ENST00000627685 LORP23490 312 aaPredicted RBP8.63□□□□□ -1.03
TCF4-260ENST00000627685 THPOP40225 353 aa8.63□□□□□ -1.03
TCF4-260ENST00000627685 STAT5BP51692 787 aa8.63□□□□□ -1.03
TCF4-260ENST00000627685 HTRA4P83105 476 aaPredicted RBP8.63□□□□□ -1.03
TCF4-260ENST00000627685 PPP2R5CQ13362 524 aa8.63□□□□□ -1.03
TCF4-260ENST00000627685 ANKRD1Q15327 319 aa8.63□□□□□ -1.03
TCF4-260ENST00000627685 FBXO47Q5MNV8 452 aa8.63□□□□□ -1.03
TCF4-260ENST00000627685 KRT40Q6A162 431 aa8.63□□□□□ -1.03
TCF4-260ENST00000627685 PPP4R3AQ6IN85 833 aa8.63□□□□□ -1.03
TCF4-260ENST00000627685 FOXR1Q6PIV2 292 aa8.63□□□□□ -1.03
TCF4-260ENST00000627685 RTN4RL1Q86UN2 441 aaPredicted RBP8.63□□□□□ -1.03
TCF4-260ENST00000627685 CCDC83Q8IWF9 413 aa8.63□□□□□ -1.03
TCF4-260ENST00000627685 KIAA0319LQ8IZA0 1049 aa8.63□□□□□ -1.03
TCF4-260ENST00000627685 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.63□□□□□ -1.03
TCF4-260ENST00000627685 MAFAQ8NHW3 353 aaPredicted RBP8.63□□□□□ -1.03
TCF4-260ENST00000627685 BICD2Q8TD16 824 aa8.63□□□□□ -1.03
TCF4-260ENST00000627685 DNAJB3Q8WWF6 145 aa8.63□□□□□ -1.03
TCF4-260ENST00000627685 SDF4Q9BRK5 362 aa8.63□□□□□ -1.03
TCF4-260ENST00000627685 C22orf23Q9BZE7 217 aa8.63□□□□□ -1.03
TCF4-260ENST00000627685 FTOQ9C0B1 505 aaKnown RBP eCLIP8.63□□□□□ -1.03
TCF4-260ENST00000627685 TMEM60Q9H2L4 133 aa8.63□□□□□ -1.03
TCF4-260ENST00000627685 SLC28A3Q9HAS3 691 aa8.63□□□□□ -1.03
TCF4-260ENST00000627685 TFIP11Q9UBB9 837 aaKnown RBP8.63□□□□□ -1.03
TCF4-260ENST00000627685 LIMCH1Q9UPQ0 1083 aa8.63□□□□□ -1.03
TCF4-260ENST00000627685 PCDHA2Q9Y5H9 948 aa8.63□□□□□ -1.03
TCF4-260ENST00000627685 MICAL3Q7RTP6 2002 aa8.63□□□□□ -1.03
TCF4-260ENST00000627685 XIRP2A4UGR9 3374 aa8.62□□□□□ -1.03
TCF4-260ENST00000627685 VCANP13611 3396 aa8.62□□□□□ -1.03
TCF4-260ENST00000627685 IGKV6-21A0A0C4DH24 114 aa8.62□□□□□ -1.03
TCF4-260ENST00000627685 A0A1B0GTH6 734 aa8.62□□□□□ -1.03
TCF4-260ENST00000627685 SMIM35A0A1B0GVV1 85 aa8.62□□□□□ -1.03
TCF4-260ENST00000627685 MGEA5O60502 916 aa8.62□□□□□ -1.03
TCF4-260ENST00000627685 GPR32O75388 356 aa8.62□□□□□ -1.03
TCF4-260ENST00000627685 CDKL5O76039 1030 aa8.62□□□□□ -1.03
TCF4-260ENST00000627685 GJB5O95377 273 aa8.62□□□□□ -1.03
TCF4-260ENST00000627685 POU3F3P20264 500 aaPredicted RBP8.62□□□□□ -1.03
TCF4-260ENST00000627685 SLC26A2P50443 739 aa8.62□□□□□ -1.03
TCF4-260ENST00000627685 PRKCEQ02156 737 aa8.62□□□□□ -1.03
TCF4-260ENST00000627685 NONOQ15233 471 aaKnown RBP eCLIP8.62□□□□□ -1.03
TCF4-260ENST00000627685 LRCH2Q5VUJ6 765 aa8.62□□□□□ -1.03
TCF4-260ENST00000627685 SWSAP1Q6NVH7 229 aa8.62□□□□□ -1.03
TCF4-260ENST00000627685 TAF2Q6P1X5 1199 aa8.62□□□□□ -1.03
TCF4-260ENST00000627685 MTHFD1LQ6UB35 978 aa8.62□□□□□ -1.03
TCF4-260ENST00000627685 PIK3AP1Q6ZUJ8 805 aa8.62□□□□□ -1.03
TCF4-260ENST00000627685 ANO5Q75V66 913 aa8.62□□□□□ -1.03
TCF4-260ENST00000627685 KRT25Q7Z3Z0 450 aa8.62□□□□□ -1.03
TCF4-260ENST00000627685 SMAP1Q8IYB5 467 aaPredicted RBP8.62□□□□□ -1.03
TCF4-260ENST00000627685 DIS3L2Q8IYB7 885 aaKnown RBP8.62□□□□□ -1.03
TCF4-260ENST00000627685 GTPBP3Q969Y2 492 aaKnown RBP8.62□□□□□ -1.03
TCF4-260ENST00000627685 MTMR9Q96QG7 549 aa8.62□□□□□ -1.03
TCF4-260ENST00000627685 TBC1D22BQ9NU19 505 aa8.62□□□□□ -1.03
TCF4-260ENST00000627685 CDY2AQ9Y6F7 541 aa8.62□□□□□ -1.03
TCF4-260ENST00000627685 TRIP12Q14669 1992 aaPredicted RBP8.62□□□□□ -1.03
TCF4-260ENST00000627685 ATG2AQ2TAZ0 1938 aa8.62□□□□□ -1.03
TCF4-260ENST00000627685 ARID2Q68CP9 1835 aa8.61□□□□□ -1.03
TCF4-260ENST00000627685 FAM181BA6NEQ2 426 aa8.61□□□□□ -1.03
TCF4-260ENST00000627685 A6NJY4 79 aa8.61□□□□□ -1.03
TCF4-260ENST00000627685 BACH1O14867 736 aa8.61□□□□□ -1.03
TCF4-260ENST00000627685 HBP1O60381 514 aa8.61□□□□□ -1.03
TCF4-260ENST00000627685 RPLP2P05387 115 aaKnown RBP8.61□□□□□ -1.03
TCF4-260ENST00000627685 GHRP10912 638 aa8.61□□□□□ -1.03
TCF4-260ENST00000627685 PLA2G4AP47712 749 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms