RNA–Protein interactions for RNA: ENST00000626948.2

SOX2-OT-241, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 836 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-241ENST00000626948 NRDE2Q9H7Z3 1164 aa15.15■□□□□ 0.02
SOX2-OT-241ENST00000626948 FAM105AQ9NUU6 356 aa15.15■□□□□ 0.02
SOX2-OT-241ENST00000626948 TBC1D13Q9NVG8 400 aa15.15■□□□□ 0.02
SOX2-OT-241ENST00000626948 RNF216Q9NWF9 866 aaPredicted RBP15.15■□□□□ 0.02
SOX2-OT-241ENST00000626948 SPG21Q9NZD8 308 aa15.15■□□□□ 0.02
SOX2-OT-241ENST00000626948 DNAJB4Q9UDY4 337 aa15.15■□□□□ 0.02
SOX2-OT-241ENST00000626948 COL4A3BPQ9Y5P4 624 aa15.15■□□□□ 0.02
SOX2-OT-241ENST00000626948 A0A087WWV3 80 aa15.14■□□□□ 0.01
SOX2-OT-241ENST00000626948 C2orf71A6NGG8 1288 aa15.14■□□□□ 0.01
SOX2-OT-241ENST00000626948 ZNF623O75123 536 aa15.14■□□□□ 0.01
SOX2-OT-241ENST00000626948 YWHABP31946 246 aaKnown RBP15.14■□□□□ 0.01
SOX2-OT-241ENST00000626948 DNM2P50570 870 aa15.14■□□□□ 0.01
SOX2-OT-241ENST00000626948 FOSBP53539 338 aa15.14■□□□□ 0.01
SOX2-OT-241ENST00000626948 LAMTOR4Q0VGL1 99 aa15.14■□□□□ 0.01
SOX2-OT-241ENST00000626948 NCAPH2Q6IBW4 605 aa15.14■□□□□ 0.01
SOX2-OT-241ENST00000626948 ANKRD54Q6NXT1 300 aa15.14■□□□□ 0.01
SOX2-OT-241ENST00000626948 LLGL2Q6P1M3 1020 aa15.14■□□□□ 0.01
SOX2-OT-241ENST00000626948 ABI1Q8IZP0 508 aa15.14■□□□□ 0.01
SOX2-OT-241ENST00000626948 MRPL43Q8N983 215 aaKnown RBP15.14■□□□□ 0.01
SOX2-OT-241ENST00000626948 AUTS2Q8WXX7 1259 aa15.14■□□□□ 0.01
SOX2-OT-241ENST00000626948 PPP2R3CQ969Q6 453 aa15.14■□□□□ 0.01
SOX2-OT-241ENST00000626948 CDCA3Q99618 268 aaPredicted RBP15.14■□□□□ 0.01
SOX2-OT-241ENST00000626948 HSD17B14Q9BPX1 270 aa15.14■□□□□ 0.01
SOX2-OT-241ENST00000626948 APOL5Q9BWW9 433 aa15.14■□□□□ 0.01
SOX2-OT-241ENST00000626948 AGPAT5Q9NUQ2 364 aa15.14■□□□□ 0.01
SOX2-OT-241ENST00000626948 DACT1Q9NYF0 836 aa15.14■□□□□ 0.01
SOX2-OT-241ENST00000626948 ARIH1Q9Y4X5 557 aaPredicted RBP15.14■□□□□ 0.01
SOX2-OT-241ENST00000626948 DDHD2O94830 711 aa15.13■□□□□ 0.01
SOX2-OT-241ENST00000626948 SFPQP23246 707 aaKnown RBP eCLIP15.13■□□□□ 0.01
SOX2-OT-241ENST00000626948 KRT2P35908 639 aa15.13■□□□□ 0.01
SOX2-OT-241ENST00000626948 CDC42EP1Q00587 391 aa15.13■□□□□ 0.01
SOX2-OT-241ENST00000626948 EMC2Q15006 297 aa15.13■□□□□ 0.01
SOX2-OT-241ENST00000626948 TWF2Q6IBS0 349 aaKnown RBP15.13■□□□□ 0.01
SOX2-OT-241ENST00000626948 PDE12Q6L8Q7 609 aaKnown RBP15.13■□□□□ 0.01
SOX2-OT-241ENST00000626948 KANK3Q6NY19 840 aa15.13■□□□□ 0.01
SOX2-OT-241ENST00000626948 CATSPER4Q7RTX7 472 aa15.13■□□□□ 0.01
SOX2-OT-241ENST00000626948 MRPL10Q7Z7H8 261 aaKnown RBP15.13■□□□□ 0.01
SOX2-OT-241ENST00000626948 FERMT3Q86UX7 667 aa15.13■□□□□ 0.01
SOX2-OT-241ENST00000626948 FAM122AQ96E09 287 aa15.13■□□□□ 0.01
SOX2-OT-241ENST00000626948 MTMR9Q96QG7 549 aa15.13■□□□□ 0.01
SOX2-OT-241ENST00000626948 EIF2AK1Q9BQI3 630 aaKnown RBP15.13■□□□□ 0.01
SOX2-OT-241ENST00000626948 ZBP1Q9H171 429 aa15.13■□□□□ 0.01
SOX2-OT-241ENST00000626948 TMEM60Q9H2L4 133 aa15.13■□□□□ 0.01
SOX2-OT-241ENST00000626948 ENTPD7Q9NQZ7 604 aa15.13■□□□□ 0.01
SOX2-OT-241ENST00000626948 HCFC2Q9Y5Z7 792 aa15.13■□□□□ 0.01
SOX2-OT-241ENST00000626948 CLASP2O75122 1294 aaKnown RBP15.12■□□□□ 0.01
SOX2-OT-241ENST00000626948 ZC3H11AO75152 810 aaKnown RBP eCLIP15.12■□□□□ 0.01
SOX2-OT-241ENST00000626948 GALTP07902 379 aa15.12■□□□□ 0.01
SOX2-OT-241ENST00000626948 SRGAP2CP0DJJ0 459 aa15.12■□□□□ 0.01
SOX2-OT-241ENST00000626948 HOXD11P31277 338 aaPredicted RBP15.12■□□□□ 0.01
SOX2-OT-241ENST00000626948 PPM1AP35813 382 aa15.12■□□□□ 0.01
SOX2-OT-241ENST00000626948 TECP42680 631 aa15.12■□□□□ 0.01
SOX2-OT-241ENST00000626948 SLC11A1P49279 550 aa15.12■□□□□ 0.01
SOX2-OT-241ENST00000626948 NEK4P51957 841 aa15.12■□□□□ 0.01
SOX2-OT-241ENST00000626948 POLGP54098 1239 aaPredicted RBP15.12■□□□□ 0.01
SOX2-OT-241ENST00000626948 ANKRD1Q15327 319 aa15.12■□□□□ 0.01
SOX2-OT-241ENST00000626948 AMHR2Q16671 573 aa15.12■□□□□ 0.01
SOX2-OT-241ENST00000626948 TMC7Q7Z402 723 aa15.12■□□□□ 0.01
SOX2-OT-241ENST00000626948 SMG8Q8ND04 991 aaKnown RBP15.12■□□□□ 0.01
SOX2-OT-241ENST00000626948 POP1Q99575 1024 aaKnown RBP15.12■□□□□ 0.01
SOX2-OT-241ENST00000626948 PHF7Q9BWX1 381 aaPredicted RBP15.12■□□□□ 0.01
SOX2-OT-241ENST00000626948 RNF39Q9H2S5 420 aa15.12■□□□□ 0.01
SOX2-OT-241ENST00000626948 NGRNQ9NPE2 291 aaKnown RBP15.12■□□□□ 0.01
SOX2-OT-241ENST00000626948 PCDHB2Q9Y5E7 798 aa15.12■□□□□ 0.01
SOX2-OT-241ENST00000626948 LYPLA2O95372 231 aa15.11■□□□□ 0.01
SOX2-OT-241ENST00000626948 XBP1P17861 261 aa15.11■□□□□ 0.01
SOX2-OT-241ENST00000626948 RFC5P40937 340 aa15.11■□□□□ 0.01
SOX2-OT-241ENST00000626948 XKR9Q5GH70 373 aa15.11■□□□□ 0.01
SOX2-OT-241ENST00000626948 NOMO2Q5JPE7 1267 aa15.11■□□□□ 0.01
SOX2-OT-241ENST00000626948 SRGAP1Q7Z6B7 1085 aa15.11■□□□□ 0.01
SOX2-OT-241ENST00000626948 TPH2Q8IWU9 490 aa15.11■□□□□ 0.01
SOX2-OT-241ENST00000626948 DIS3L2Q8IYB7 885 aaKnown RBP15.11■□□□□ 0.01
SOX2-OT-241ENST00000626948 ASAP3Q8TDY4 903 aa15.11■□□□□ 0.01
SOX2-OT-241ENST00000626948 SLC7A3Q8WY07 619 aa15.11■□□□□ 0.01
SOX2-OT-241ENST00000626948 EDAQ92838 391 aa15.11■□□□□ 0.01
SOX2-OT-241ENST00000626948 IGSF21Q96ID5 467 aa15.11■□□□□ 0.01
SOX2-OT-241ENST00000626948 RPGRIP1Q96KN7 1286 aa15.11■□□□□ 0.01
SOX2-OT-241ENST00000626948 KIF2CQ99661 725 aa15.11■□□□□ 0.01
SOX2-OT-241ENST00000626948 EIF2AQ9BY44 585 aaKnown RBP15.11■□□□□ 0.01
SOX2-OT-241ENST00000626948 MRPL9Q9BYD2 267 aaKnown RBP15.11■□□□□ 0.01
SOX2-OT-241ENST00000626948 INO80BQ9C086 356 aaPredicted RBP15.11■□□□□ 0.01
SOX2-OT-241ENST00000626948 ZSWIM4Q9H7M6 989 aa15.11■□□□□ 0.01
SOX2-OT-241ENST00000626948 PUF60Q9UHX1 559 aaKnown RBP15.11■□□□□ 0.01
SOX2-OT-241ENST00000626948 INPP5FQ9Y2H2 1132 aa15.11■□□□□ 0.01
SOX2-OT-241ENST00000626948 HCN4Q9Y3Q4 1203 aa15.11■□□□□ 0.01
SOX2-OT-241ENST00000626948 POTEMA6NI47 508 aa15.1■□□□□ 0.01
SOX2-OT-241ENST00000626948 TSPAN1O60635 241 aa15.1■□□□□ 0.01
SOX2-OT-241ENST00000626948 NEFLP07196 543 aa15.1■□□□□ 0.01
SOX2-OT-241ENST00000626948 WEE2P0C1S8 567 aa15.1■□□□□ 0.01
SOX2-OT-241ENST00000626948 SPATA31C1P0DKV0 1188 aa15.1■□□□□ 0.01
SOX2-OT-241ENST00000626948 ALDH7A1P49419 539 aaKnown RBP15.1■□□□□ 0.01
SOX2-OT-241ENST00000626948 KRT17Q04695 432 aa15.1■□□□□ 0.01
SOX2-OT-241ENST00000626948 SLFN12Q8IYM2 578 aa15.1■□□□□ 0.01
SOX2-OT-241ENST00000626948 VPS52Q8N1B4 723 aa15.1■□□□□ 0.01
SOX2-OT-241ENST00000626948 RNF149Q8NC42 400 aa15.1■□□□□ 0.01
SOX2-OT-241ENST00000626948 PSPC1Q8WXF1 523 aaKnown RBP15.1■□□□□ 0.01
SOX2-OT-241ENST00000626948 JPH2Q9BR39 696 aaPredicted RBP15.1■□□□□ 0.01
SOX2-OT-241ENST00000626948 TTC12Q9H892 705 aaPredicted RBP15.1■□□□□ 0.01
SOX2-OT-241ENST00000626948 MIOSQ9NXC5 875 aa15.1■□□□□ 0.01
SOX2-OT-241ENST00000626948 PCDHA12Q9UN75 941 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms