RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 ZNF598Q86UK7 904 aaKnown RBP18.54■□□□□ 0.56
UBE3D-208ENST00000626828 IFT74Q96LB3 600 aa18.54■□□□□ 0.56
UBE3D-208ENST00000626828 ZNF396Q96N95 335 aaPredicted RBP18.54■□□□□ 0.56
UBE3D-208ENST00000626828 PLVAPQ9BX97 442 aa18.54■□□□□ 0.56
UBE3D-208ENST00000626828 TMEM117Q9H0C3 514 aa18.54■□□□□ 0.56
UBE3D-208ENST00000626828 SRPRBQ9Y5M8 271 aaKnown RBP18.54■□□□□ 0.56
UBE3D-208ENST00000626828 MORC2Q9Y6X9 1032 aaPredicted RBP18.54■□□□□ 0.56
UBE3D-208ENST00000626828 LRRIQ4A6NIV6 560 aa18.53■□□□□ 0.56
UBE3D-208ENST00000626828 C5orf67F2Z3F1 127 aa18.53■□□□□ 0.56
UBE3D-208ENST00000626828 ZSCAN22P10073 491 aaPredicted RBP18.53■□□□□ 0.56
UBE3D-208ENST00000626828 MARCKSP29966 332 aaPredicted RBP18.53■□□□□ 0.56
UBE3D-208ENST00000626828 NAMPTP43490 491 aa18.53■□□□□ 0.56
UBE3D-208ENST00000626828 GATMP50440 423 aa18.53■□□□□ 0.56
UBE3D-208ENST00000626828 MBTD1Q05BQ5 628 aa18.53■□□□□ 0.56
UBE3D-208ENST00000626828 PAN2Q504Q3 1202 aaKnown RBP18.53■□□□□ 0.56
UBE3D-208ENST00000626828 NAALADL2Q58DX5 795 aa18.53■□□□□ 0.56
UBE3D-208ENST00000626828 C1orf186Q6ZWK4 172 aa18.53■□□□□ 0.56
UBE3D-208ENST00000626828 KCNK18Q7Z418 384 aa18.53■□□□□ 0.56
UBE3D-208ENST00000626828 ZBTB8OSQ8IWT0 167 aa18.53■□□□□ 0.56
UBE3D-208ENST00000626828 ABI1Q8IZP0 508 aa18.53■□□□□ 0.56
UBE3D-208ENST00000626828 SYT2Q8N9I0 419 aaPredicted RBP18.53■□□□□ 0.56
UBE3D-208ENST00000626828 RNF169Q8NCN4 708 aa18.53■□□□□ 0.56
UBE3D-208ENST00000626828 RSPH1Q8WYR4 309 aa18.53■□□□□ 0.56
UBE3D-208ENST00000626828 PGBD4Q96DM1 585 aa18.53■□□□□ 0.56
UBE3D-208ENST00000626828 USP28Q96RU2 1077 aa18.53■□□□□ 0.56
UBE3D-208ENST00000626828 PLIN2Q99541 437 aa18.53■□□□□ 0.56
UBE3D-208ENST00000626828 TIPINQ9BVW5 301 aa18.53■□□□□ 0.56
UBE3D-208ENST00000626828 CCSER1Q9C0I3 900 aa18.53■□□□□ 0.56
UBE3D-208ENST00000626828 C2orf40Q9H1Z8 148 aa18.53■□□□□ 0.56
UBE3D-208ENST00000626828 FAM105AQ9NUU6 356 aa18.53■□□□□ 0.56
UBE3D-208ENST00000626828 KCNG1Q9UIX4 513 aa18.53■□□□□ 0.56
UBE3D-208ENST00000626828 MRPL42Q9Y6G3 142 aaKnown RBP18.53■□□□□ 0.56
UBE3D-208ENST00000626828 COL4A6Q14031 1691 aa18.53■□□□□ 0.56
UBE3D-208ENST00000626828 FNDC1Q4ZHG4 1894 aaPredicted RBP18.52■□□□□ 0.56
UBE3D-208ENST00000626828 LINC00271P0C7V0 271 aa18.52■□□□□ 0.56
UBE3D-208ENST00000626828 FGFR1P11362 822 aa18.52■□□□□ 0.56
UBE3D-208ENST00000626828 CTNNB1P35222 781 aa18.52■□□□□ 0.56
UBE3D-208ENST00000626828 GRIN1Q05586 938 aa18.52■□□□□ 0.56
UBE3D-208ENST00000626828 TMEM119Q4V9L6 283 aa18.52■□□□□ 0.56
UBE3D-208ENST00000626828 MRPL10Q7Z7H8 261 aaKnown RBP18.52■□□□□ 0.56
UBE3D-208ENST00000626828 CNNM3Q8NE01 707 aa18.52■□□□□ 0.56
UBE3D-208ENST00000626828 GDPD5Q8WTR4 605 aa18.52■□□□□ 0.56
UBE3D-208ENST00000626828 PPM1EQ8WY54 764 aa18.52■□□□□ 0.56
UBE3D-208ENST00000626828 CCDC51Q96ER9 411 aa18.52■□□□□ 0.56
UBE3D-208ENST00000626828 CASD1Q96PB1 797 aa18.52■□□□□ 0.56
UBE3D-208ENST00000626828 C11orf84Q9BUA3 381 aaPredicted RBP18.52■□□□□ 0.56
UBE3D-208ENST00000626828 POLD4Q9HCU8 107 aa18.52■□□□□ 0.56
UBE3D-208ENST00000626828 AAASQ9NRG9 546 aa18.52■□□□□ 0.56
UBE3D-208ENST00000626828 TYW1Q9NV66 732 aaKnown RBP18.52■□□□□ 0.56
UBE3D-208ENST00000626828 PRMT7Q9NVM4 692 aaPredicted RBP18.52■□□□□ 0.56
UBE3D-208ENST00000626828 PCDHB2Q9Y5E7 798 aa18.52■□□□□ 0.56
UBE3D-208ENST00000626828 TSPAN1O60635 241 aa18.51■□□□□ 0.55
UBE3D-208ENST00000626828 SSBP05455 408 aaKnown RBP eCLIP18.51■□□□□ 0.55
UBE3D-208ENST00000626828 PLA2G4BP0C869 781 aa18.51■□□□□ 0.55
UBE3D-208ENST00000626828 CCDC85BQ15834 202 aaPredicted RBP18.51■□□□□ 0.55
UBE3D-208ENST00000626828 PTPROQ16827 1216 aa18.51■□□□□ 0.55
UBE3D-208ENST00000626828 SPOUT1Q5T280 376 aaKnown RBP18.51■□□□□ 0.55
UBE3D-208ENST00000626828 NOTUMQ6P988 496 aa18.51■□□□□ 0.55
UBE3D-208ENST00000626828 DEPTORQ8TB45 409 aa18.51■□□□□ 0.55
UBE3D-208ENST00000626828 P2RX5Q93086 422 aa18.51■□□□□ 0.55
UBE3D-208ENST00000626828 PRIMPOLQ96LW4 560 aa18.51■□□□□ 0.55
UBE3D-208ENST00000626828 DRC1Q96MC2 740 aa18.51■□□□□ 0.55
UBE3D-208ENST00000626828 CSRNP2Q9H175 543 aa18.51■□□□□ 0.55
UBE3D-208ENST00000626828 FZD8Q9H461 694 aa18.51■□□□□ 0.55
UBE3D-208ENST00000626828 C17orf75Q9HAS0 396 aa18.51■□□□□ 0.55
UBE3D-208ENST00000626828 RNF19AQ9NV58 838 aa18.51■□□□□ 0.55
UBE3D-208ENST00000626828 KCND2Q9NZV8 630 aa18.51■□□□□ 0.55
UBE3D-208ENST00000626828 TFIP11Q9UBB9 837 aaKnown RBP18.51■□□□□ 0.55
UBE3D-208ENST00000626828 DAXXQ9UER7 740 aaPredicted RBP18.51■□□□□ 0.55
UBE3D-208ENST00000626828 FBXO2Q9UK22 296 aaPredicted RBP18.51■□□□□ 0.55
UBE3D-208ENST00000626828 PCDHB12Q9Y5F1 795 aa18.51■□□□□ 0.55
UBE3D-208ENST00000626828 NLRC5Q86WI3 1866 aa18.51■□□□□ 0.55
UBE3D-208ENST00000626828 TRANK1O15050 2925 aa18.5■□□□□ 0.55
UBE3D-208ENST00000626828 F13A1P00488 732 aa18.5■□□□□ 0.55
UBE3D-208ENST00000626828 ATF7P17544 494 aaPredicted RBP18.5■□□□□ 0.55
UBE3D-208ENST00000626828 ARF4P18085 180 aaPredicted RBP18.5■□□□□ 0.55
UBE3D-208ENST00000626828 GUCY2CP25092 1073 aa18.5■□□□□ 0.55
UBE3D-208ENST00000626828 NASPP49321 788 aaPredicted RBP18.5■□□□□ 0.55
UBE3D-208ENST00000626828 EFNA5P52803 228 aa18.5■□□□□ 0.55
UBE3D-208ENST00000626828 BECN1Q14457 450 aa18.5■□□□□ 0.55
UBE3D-208ENST00000626828 STK38Q15208 465 aa18.5■□□□□ 0.55
UBE3D-208ENST00000626828 MAPK6Q16659 721 aa18.5■□□□□ 0.55
UBE3D-208ENST00000626828 AMHR2Q16671 573 aa18.5■□□□□ 0.55
UBE3D-208ENST00000626828 FAM187BQ17R55 369 aa18.5■□□□□ 0.55
UBE3D-208ENST00000626828 UBXN11Q5T124 520 aa18.5■□□□□ 0.55
UBE3D-208ENST00000626828 FOXD4L5Q5VV16 416 aaPredicted RBP18.5■□□□□ 0.55
UBE3D-208ENST00000626828 CDCA2Q69YH5 1023 aaPredicted RBP18.5■□□□□ 0.55
UBE3D-208ENST00000626828 ATL3Q6DD88 541 aa18.5■□□□□ 0.55
UBE3D-208ENST00000626828 PPP4R3CPQ6ZMV5 832 aa18.5■□□□□ 0.55
UBE3D-208ENST00000626828 KRI1Q8N9T8 703 aaKnown RBP18.5■□□□□ 0.55
UBE3D-208ENST00000626828 SLC17A8Q8NDX2 589 aa18.5■□□□□ 0.55
UBE3D-208ENST00000626828 RASSF8Q8NHQ8 419 aa18.5■□□□□ 0.55
UBE3D-208ENST00000626828 FOXD4L4Q8WXT5 416 aaPredicted RBP18.5■□□□□ 0.55
UBE3D-208ENST00000626828 BSNDQ8WZ55 320 aa18.5■□□□□ 0.55
UBE3D-208ENST00000626828 CCDC39Q9UFE4 941 aa18.5■□□□□ 0.55
UBE3D-208ENST00000626828 RALGAPA2Q2PPJ7 1873 aa18.5■□□□□ 0.55
UBE3D-208ENST00000626828 A0A1B0GUA9 196 aa18.49■□□□□ 0.55
UBE3D-208ENST00000626828 HIP1RO75146 1068 aa18.49■□□□□ 0.55
UBE3D-208ENST00000626828 DDIT3P35638 169 aa18.49■□□□□ 0.55
UBE3D-208ENST00000626828 SLC12A3P55017 1021 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms